RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 FAM110CQ1W6H9 321 aa11.18□□□□□ -0.62
PVT1-207ENST00000518528 FAM109BQ6ICB4 259 aaPredicted RBP11.18□□□□□ -0.62
PVT1-207ENST00000518528 CDC42EP5Q6NZY7 148 aa11.18□□□□□ -0.62
PVT1-207ENST00000518528 ZSCAN29Q8IWY8 852 aaPredicted RBP11.18□□□□□ -0.62
PVT1-207ENST00000518528 ANKRD13CQ8N6S4 541 aa11.18□□□□□ -0.62
PVT1-207ENST00000518528 SRCIN1Q9C0H9 1055 aa11.18□□□□□ -0.62
PVT1-207ENST00000518528 USP40Q9NVE5 1235 aa11.18□□□□□ -0.62
PVT1-207ENST00000518528 AGTPBP1Q9UPW5 1226 aa11.18□□□□□ -0.62
PVT1-207ENST00000518528 AFG3L2Q9Y4W6 797 aa11.18□□□□□ -0.62
PVT1-207ENST00000518528 CTNND1O60716 968 aaKnown RBP11.17□□□□□ -0.62
PVT1-207ENST00000518528 SLC5A1P13866 664 aa11.17□□□□□ -0.62
PVT1-207ENST00000518528 PUM3Q15397 648 aaKnown RBP11.17□□□□□ -0.62
PVT1-207ENST00000518528 SLC4A10Q6U841 1118 aa11.17□□□□□ -0.62
PVT1-207ENST00000518528 WWC1Q8IX03 1113 aa11.17□□□□□ -0.62
PVT1-207ENST00000518528 LBHD1Q9BQE6 289 aaPredicted RBP11.17□□□□□ -0.62
PVT1-207ENST00000518528 GNL3LQ9NVN8 582 aaKnown RBP11.17□□□□□ -0.62
PVT1-207ENST00000518528 DAGLAQ9Y4D2 1042 aa11.17□□□□□ -0.62
PVT1-207ENST00000518528 ARAP2Q8WZ64 1704 aa11.16□□□□□ -0.62
PVT1-207ENST00000518528 TRIM75PA6NK02 468 aa11.16□□□□□ -0.62
PVT1-207ENST00000518528 PHF20L1A8MW92 1017 aa11.16□□□□□ -0.62
PVT1-207ENST00000518528 ENTPD3O75355 529 aa11.16□□□□□ -0.62
PVT1-207ENST00000518528 LDHBP07195 334 aaKnown RBP11.16□□□□□ -0.62
PVT1-207ENST00000518528 NFIAQ12857 509 aa11.16□□□□□ -0.62
PVT1-207ENST00000518528 TRMT44Q8IYL2 757 aaKnown RBP11.16□□□□□ -0.62
PVT1-207ENST00000518528 OGDHLQ9ULD0 1010 aa11.16□□□□□ -0.62
PVT1-207ENST00000518528 COL6A3P12111 3177 aa11.16□□□□□ -0.62
PVT1-207ENST00000518528 ZSWIM8A7E2V4 1837 aa11.16□□□□□ -0.62
PVT1-207ENST00000518528 VAMP4O75379 141 aa11.15□□□□□ -0.62
PVT1-207ENST00000518528 DIXDC1Q155Q3 683 aa11.15□□□□□ -0.62
PVT1-207ENST00000518528 LRRC24Q50LG9 513 aa11.15□□□□□ -0.62
PVT1-207ENST00000518528 SLF2Q8IX21 1173 aa11.15□□□□□ -0.62
PVT1-207ENST00000518528 PROCA1Q8NCQ7 364 aaPredicted RBP11.15□□□□□ -0.62
PVT1-207ENST00000518528 SUCLG2Q96I99 432 aa11.15□□□□□ -0.62
PVT1-207ENST00000518528 PRDM6Q9NQX0 595 aa11.15□□□□□ -0.62
PVT1-207ENST00000518528 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
PVT1-207ENST00000518528 LAMA3Q16787 3333 aa11.14□□□□□ -0.63
PVT1-207ENST00000518528 POTEB2H3BUK9 544 aa11.14□□□□□ -0.63
PVT1-207ENST00000518528 RGS3P49796 1198 aa11.14□□□□□ -0.63
PVT1-207ENST00000518528 ZNF697Q5TEC3 545 aa11.14□□□□□ -0.63
PVT1-207ENST00000518528 VGLL2Q8N8G2 317 aa11.14□□□□□ -0.63
PVT1-207ENST00000518528 LPIN2Q92539 896 aa11.14□□□□□ -0.63
PVT1-207ENST00000518528 SYMPKQ92797 1274 aaKnown RBP11.14□□□□□ -0.63
PVT1-207ENST00000518528 IDI2Q9BXS1 227 aa11.14□□□□□ -0.63
PVT1-207ENST00000518528 TBC1D2Q9BYX2 928 aa11.14□□□□□ -0.63
PVT1-207ENST00000518528 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
PVT1-207ENST00000518528 SPINK5Q9NQ38 1064 aaPredicted RBP11.14□□□□□ -0.63
PVT1-207ENST00000518528 FANCIQ9NVI1 1328 aa11.13□□□□□ -0.63
PVT1-207ENST00000518528 MDM2Q00987 491 aaPredicted RBP11.13□□□□□ -0.63
PVT1-207ENST00000518528 PDE3AQ14432 1141 aa11.13□□□□□ -0.63
PVT1-207ENST00000518528 RABL6Q3YEC7 729 aaPredicted RBP11.13□□□□□ -0.63
PVT1-207ENST00000518528 NCBP3Q53F19 620 aaKnown RBP11.13□□□□□ -0.63
PVT1-207ENST00000518528 CCAR1Q8IX12 1150 aaKnown RBP11.13□□□□□ -0.63
PVT1-207ENST00000518528 ZGPATQ8N5A5 531 aaKnown RBP11.13□□□□□ -0.63
PVT1-207ENST00000518528 SOCS4Q8WXH5 440 aa11.13□□□□□ -0.63
PVT1-207ENST00000518528 BICC1Q9H694 974 aaKnown RBP11.13□□□□□ -0.63
PVT1-207ENST00000518528 PRKAG2Q9UGJ0 569 aa11.13□□□□□ -0.63
PVT1-207ENST00000518528 GJD2Q9UKL4 321 aa11.13□□□□□ -0.63
PVT1-207ENST00000518528 XRCC5P13010 732 aaKnown RBP11.12□□□□□ -0.63
PVT1-207ENST00000518528 PRKAR2AP13861 404 aaKnown RBP11.12□□□□□ -0.63
PVT1-207ENST00000518528 ZKSCAN1P17029 563 aaPredicted RBP11.12□□□□□ -0.63
PVT1-207ENST00000518528 FGFR2P21802 821 aa11.12□□□□□ -0.63
PVT1-207ENST00000518528 PRDX5P30044 214 aa11.12□□□□□ -0.63
PVT1-207ENST00000518528 MAP3K10Q02779 954 aa11.12□□□□□ -0.63
PVT1-207ENST00000518528 EXOSC9Q06265 439 aaKnown RBP11.12□□□□□ -0.63
PVT1-207ENST00000518528 TREML2Q5T2D2 321 aa11.12□□□□□ -0.63
PVT1-207ENST00000518528 ZFPM1Q8IX07 1006 aa11.12□□□□□ -0.63
PVT1-207ENST00000518528 FAM161BQ96MY7 647 aa11.12□□□□□ -0.63
PVT1-207ENST00000518528 GUCD1Q96NT3 240 aa11.12□□□□□ -0.63
PVT1-207ENST00000518528 NUDT12Q9BQG2 462 aa11.12□□□□□ -0.63
PVT1-207ENST00000518528 DENND2AQ9ULE3 1009 aa11.12□□□□□ -0.63
PVT1-207ENST00000518528 TTC28Q96AY4 2481 aa11.11□□□□□ -0.63
PVT1-207ENST00000518528 SEMA3EO15041 775 aa11.11□□□□□ -0.63
PVT1-207ENST00000518528 NBPF7P0C2Y1 421 aaPredicted RBP11.11□□□□□ -0.63
PVT1-207ENST00000518528 CYP2B6P20813 491 aa11.11□□□□□ -0.63
PVT1-207ENST00000518528 IRX3P78415 501 aaPredicted RBP11.11□□□□□ -0.63
PVT1-207ENST00000518528 TRIM32Q13049 653 aa11.11□□□□□ -0.63
PVT1-207ENST00000518528 SPP2Q13103 211 aa11.11□□□□□ -0.63
PVT1-207ENST00000518528 MAP3K21Q5TCX8 1036 aa11.11□□□□□ -0.63
PVT1-207ENST00000518528 DZIP1Q86YF9 867 aaKnown RBP11.11□□□□□ -0.63
PVT1-207ENST00000518528 WDR63Q8IWG1 891 aa11.11□□□□□ -0.63
PVT1-207ENST00000518528 ZNF280CQ8ND82 737 aa11.11□□□□□ -0.63
PVT1-207ENST00000518528 MAFAQ8NHW3 353 aaPredicted RBP11.11□□□□□ -0.63
PVT1-207ENST00000518528 KAZALD1Q96I82 304 aa11.11□□□□□ -0.63
PVT1-207ENST00000518528 OSBPL5Q9H0X9 879 aaPredicted RBP11.11□□□□□ -0.63
PVT1-207ENST00000518528 ATRNL1Q5VV63 1379 aa11.11□□□□□ -0.63
PVT1-207ENST00000518528 UTYO14607 1347 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 PFASO15067 1338 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 SALL1Q9NSC2 1324 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 EYA2O00167 538 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 TBC1D12O60347 775 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 COL6A1P12109 1028 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 MAPK4P31152 587 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 HMGCS2P54868 508 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 PICALMQ13492 652 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 LRRC26Q2I0M4 334 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 SPTY2D1Q68D10 685 aaPredicted RBP11.1□□□□□ -0.63
PVT1-207ENST00000518528 GPRC5AQ8NFJ5 357 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 TRIB2Q92519 343 aa11.1□□□□□ -0.63
PVT1-207ENST00000518528 ASCC2Q9H1I8 757 aaPredicted RBP11.1□□□□□ -0.63
PVT1-207ENST00000518528 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.1□□□□□ -0.633e-9■■■■□ 25.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms