RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ADM5C9JUS6 153 aa11.88□□□□□ -0.51
CLN8-202ENST00000517514 MAP1SQ66K74 1059 aaPredicted RBP11.88□□□□□ -0.51
CLN8-202ENST00000517514 LDHDQ86WU2 507 aa11.88□□□□□ -0.51
CLN8-202ENST00000517514 MAPKAPK5Q8IW41 473 aa11.88□□□□□ -0.51
CLN8-202ENST00000517514 GLIS2Q9BZE0 524 aaPredicted RBP11.88□□□□□ -0.51
CLN8-202ENST00000517514 VEZTQ9HBM0 779 aa11.88□□□□□ -0.51
CLN8-202ENST00000517514 DCP1AQ9NPI6 582 aaPredicted RBP11.88□□□□□ -0.51
CLN8-202ENST00000517514 TRPM7Q96QT4 1865 aa11.88□□□□□ -0.51
CLN8-202ENST00000517514 ATRNL1Q5VV63 1379 aa11.88□□□□□ -0.51
CLN8-202ENST00000517514 COL2A1P02458 1487 aaPredicted RBP11.88□□□□□ -0.51
CLN8-202ENST00000517514 DDTLA6NHG4 134 aaPredicted RBP11.87□□□□□ -0.51
CLN8-202ENST00000517514 ENTPD3O75355 529 aa11.87□□□□□ -0.51
CLN8-202ENST00000517514 SEC24BO95487 1268 aa11.87□□□□□ -0.51
CLN8-202ENST00000517514 ITGBL1O95965 494 aaPredicted RBP11.87□□□□□ -0.51
CLN8-202ENST00000517514 CYP2D6P10635 497 aa11.87□□□□□ -0.51
CLN8-202ENST00000517514 HSPD1P10809 573 aaKnown RBP11.87□□□□□ -0.51
CLN8-202ENST00000517514 PLCG2P16885 1265 aa11.87□□□□□ -0.51
CLN8-202ENST00000517514 TCP10Q12799 353 aa11.87□□□□□ -0.51
CLN8-202ENST00000517514 PICALMQ13492 652 aa11.87□□□□□ -0.51
CLN8-202ENST00000517514 RASA3Q14644 834 aa11.87□□□□□ -0.51
CLN8-202ENST00000517514 PRAMEF18Q5VWM3 479 aa11.87□□□□□ -0.51
CLN8-202ENST00000517514 USP48Q86UV5 1035 aa11.87□□□□□ -0.51
CLN8-202ENST00000517514 FAM83AQ86UY5 434 aa11.87□□□□□ -0.51
CLN8-202ENST00000517514 NOL10Q9BSC4 688 aaKnown RBP11.87□□□□□ -0.51
CLN8-202ENST00000517514 CRNKL1Q9BZJ0 848 aaKnown RBP11.87□□□□□ -0.51
CLN8-202ENST00000517514 TMEM39BQ9GZU3 492 aa11.87□□□□□ -0.51
CLN8-202ENST00000517514 LSG1Q9H089 658 aaKnown RBP11.87□□□□□ -0.51
CLN8-202ENST00000517514 OSBPL5Q9H0X9 879 aaPredicted RBP11.87□□□□□ -0.51
CLN8-202ENST00000517514 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
CLN8-202ENST00000517514 SLC4A4Q9Y6R1 1079 aa11.87□□□□□ -0.51
CLN8-202ENST00000517514 CYP2D7A0A087X1C5 515 aa11.86□□□□□ -0.51
CLN8-202ENST00000517514 PATL2C9JE40 543 aaKnown RBP11.86□□□□□ -0.51
CLN8-202ENST00000517514 MYO1BO43795 1136 aa11.86□□□□□ -0.51
CLN8-202ENST00000517514 ALX1Q15699 326 aa11.86□□□□□ -0.51
CLN8-202ENST00000517514 CERS3Q8IU89 383 aa11.86□□□□□ -0.51
CLN8-202ENST00000517514 APOBEC3FQ8IUX4 373 aaKnown RBP11.86□□□□□ -0.51
CLN8-202ENST00000517514 IFNL3Q8IZI9 196 aa11.86□□□□□ -0.51
CLN8-202ENST00000517514 FAM151AQ8WW52 585 aa11.86□□□□□ -0.51
CLN8-202ENST00000517514 DEFB129Q9H1M3 183 aa11.86□□□□□ -0.51
CLN8-202ENST00000517514 ATP8A2Q9NTI2 1148 aa11.86□□□□□ -0.51
CLN8-202ENST00000517514 SAP30BPQ9UHR5 308 aaKnown RBP11.86□□□□□ -0.51
CLN8-202ENST00000517514 OTOFQ9HC10 1997 aa11.86□□□□□ -0.51
CLN8-202ENST00000517514 TRAF5O00463 557 aa11.85□□□□□ -0.51
CLN8-202ENST00000517514 FGAP02671 866 aa11.85□□□□□ -0.51
CLN8-202ENST00000517514 USP5P45974 858 aa11.85□□□□□ -0.51
CLN8-202ENST00000517514 NBPF12Q5TAG4 269 aaPredicted RBP11.85□□□□□ -0.51
CLN8-202ENST00000517514 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
CLN8-202ENST00000517514 CTR9Q6PD62 1173 aa11.85□□□□□ -0.51
CLN8-202ENST00000517514 KRT26Q7Z3Y9 468 aa11.85□□□□□ -0.51
CLN8-202ENST00000517514 DCPSQ96C86 337 aaKnown RBP11.85□□□□□ -0.51
CLN8-202ENST00000517514 NBPF3Q9H094 633 aa11.85□□□□□ -0.51
CLN8-202ENST00000517514 PALD1Q9ULE6 856 aa11.85□□□□□ -0.51
CLN8-202ENST00000517514 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
CLN8-202ENST00000517514 MYH8P13535 1937 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 USP17L12C9JPN9 530 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 USP17L21D6R901 530 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 GNAT2P19087 354 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 PLCD1P51178 756 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 SLC4A8Q2Y0W8 1093 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 SBK1Q52WX2 424 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 GIMAP6Q6P9H5 292 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 METTL16Q86W50 562 aaKnown RBP11.84□□□□□ -0.51
CLN8-202ENST00000517514 PIAS4Q8N2W9 510 aaPredicted RBP11.84□□□□□ -0.51
CLN8-202ENST00000517514 NKX2-3Q8TAU0 364 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 RUFY2Q8WXA3 655 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 MAP4K1Q92918 833 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 DSCC1Q9BVC3 393 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 DNAJC18Q9H819 358 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 TMOD2Q9NZR1 351 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 TAF6LQ9Y6J9 622 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 ZMYM6O95789 1325 aa11.84□□□□□ -0.51
CLN8-202ENST00000517514 ATAD5Q96QE3 1844 aa11.83□□□□□ -0.51
CLN8-202ENST00000517514 MAP3K10Q02779 954 aa11.83□□□□□ -0.52
CLN8-202ENST00000517514 GABPAQ06546 454 aa11.83□□□□□ -0.52
CLN8-202ENST00000517514 RRP1BQ14684 758 aaKnown RBP11.83□□□□□ -0.52
CLN8-202ENST00000517514 C12orf60Q5U649 245 aa11.83□□□□□ -0.52
CLN8-202ENST00000517514 CDC37L1Q7L3B6 337 aa11.83□□□□□ -0.52
CLN8-202ENST00000517514 SULF1Q8IWU6 871 aa11.83□□□□□ -0.52
CLN8-202ENST00000517514 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
CLN8-202ENST00000517514 CDCA5Q96FF9 252 aa11.83□□□□□ -0.52
CLN8-202ENST00000517514 MCM9Q9NXL9 1143 aa11.83□□□□□ -0.52
CLN8-202ENST00000517514 FZD1Q9UP38 647 aa11.83□□□□□ -0.52
CLN8-202ENST00000517514 PPP2R3BQ9Y5P8 575 aa11.83□□□□□ -0.52
CLN8-202ENST00000517514 PASKQ96RG2 1323 aa11.83□□□□□ -0.52
CLN8-202ENST00000517514 GREB1LQ9C091 1923 aaPredicted RBP11.82□□□□□ -0.52
CLN8-202ENST00000517514 FAM196BA6NMK8 535 aa11.82□□□□□ -0.52
CLN8-202ENST00000517514 TOMM70O94826 608 aa11.82□□□□□ -0.52
CLN8-202ENST00000517514 TNNI2P48788 182 aa11.82□□□□□ -0.52
CLN8-202ENST00000517514 TNFAIP1Q13829 316 aa11.82□□□□□ -0.52
CLN8-202ENST00000517514 CST9Q5W186 159 aa11.82□□□□□ -0.52
CLN8-202ENST00000517514 DYNLL2Q96FJ2 89 aa11.82□□□□□ -0.52
CLN8-202ENST00000517514 INCENPQ9NQS7 918 aa11.82□□□□□ -0.52
CLN8-202ENST00000517514 PHIPQ8WWQ0 1821 aa11.81□□□□□ -0.52
CLN8-202ENST00000517514 ROBO3Q96MS0 1386 aa11.81□□□□□ -0.52
CLN8-202ENST00000517514 APPP05067 770 aa11.81□□□□□ -0.52
CLN8-202ENST00000517514 MFAP1P55081 439 aaKnown RBP11.81□□□□□ -0.52
CLN8-202ENST00000517514 JAG1P78504 1218 aa11.81□□□□□ -0.52
CLN8-202ENST00000517514 COL9A3Q14050 684 aaPredicted RBP11.81□□□□□ -0.52
CLN8-202ENST00000517514 NECTIN1Q15223 517 aa11.81□□□□□ -0.52
CLN8-202ENST00000517514 SLC44A5Q8NCS7 719 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms