RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 CPLX1O14810 134 aa18.09■□□□□ 0.49
THUMPD3-210ENST00000515662 METAP2P50579 478 aaKnown RBP eCLIP18.09■□□□□ 0.49
THUMPD3-210ENST00000515662 FOSBP53539 338 aa18.09■□□□□ 0.49
THUMPD3-210ENST00000515662 CTR9Q6PD62 1173 aa18.09■□□□□ 0.49
THUMPD3-210ENST00000515662 NFXL1Q6ZNB6 911 aa18.09■□□□□ 0.49
THUMPD3-210ENST00000515662 FAM43AQ8N2R8 423 aa18.09■□□□□ 0.49
THUMPD3-210ENST00000515662 ATP6V0A2Q9Y487 856 aa18.09■□□□□ 0.49
THUMPD3-210ENST00000515662 CYP2D7A0A087X1C5 515 aa18.08■□□□□ 0.48
THUMPD3-210ENST00000515662 ZBTB43O43298 467 aa18.08■□□□□ 0.48
THUMPD3-210ENST00000515662 GRIK5Q16478 980 aa18.08■□□□□ 0.48
THUMPD3-210ENST00000515662 GRPEL1Q9HAV7 217 aa18.08■□□□□ 0.48
THUMPD3-210ENST00000515662 ATP8A2Q9NTI2 1148 aa18.08■□□□□ 0.48
THUMPD3-210ENST00000515662 PDE6BP35913 854 aa18.08■□□□□ 0.48
THUMPD3-210ENST00000515662 MSL1Q68DK7 614 aa18.08■□□□□ 0.48
THUMPD3-210ENST00000515662 DCP1AQ9NPI6 582 aaPredicted RBP18.08■□□□□ 0.48
THUMPD3-210ENST00000515662 C6orf229H3BNL8 230 aa18.07■□□□□ 0.48
THUMPD3-210ENST00000515662 GSTO1P78417 241 aa18.07■□□□□ 0.48
THUMPD3-210ENST00000515662 SART3Q15020 963 aaKnown RBP18.07■□□□□ 0.48
THUMPD3-210ENST00000515662 TTC6Q86TZ1 520 aa18.07■□□□□ 0.48
THUMPD3-210ENST00000515662 ORC3Q9UBD5 711 aaPredicted RBP18.07■□□□□ 0.48
THUMPD3-210ENST00000515662 BAZ2AQ9UIF9 1905 aaKnown RBP18.07■□□□□ 0.48
THUMPD3-210ENST00000515662 DUOX1Q9NRD9 1551 aa18.07■□□□□ 0.48
THUMPD3-210ENST00000515662 ELP1O95163 1332 aa18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 USP17L12C9JPN9 530 aa18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 USP17L21D6R901 530 aa18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 ADD1P35611 737 aaKnown RBP18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 MICU3Q86XE3 530 aa18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 ESR2Q92731 530 aa18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 SYAP1Q96A49 352 aaPredicted RBP18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 ZKSCAN3Q9BRR0 538 aa18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 SCAND2PQ9GZW5 306 aaPredicted RBP18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 SLC12A7Q9Y666 1083 aa18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 CCDC69A6NI79 296 aa18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 FGRP09769 529 aa18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 RXRAP19793 462 aa18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 TFIP11Q9UBB9 837 aaKnown RBP18.06■□□□□ 0.48
THUMPD3-210ENST00000515662 COL11A2P13942 1736 aaPredicted RBP18.05■□□□□ 0.48
THUMPD3-210ENST00000515662 PCP11498 1178 aaKnown RBP18.05■□□□□ 0.48
THUMPD3-210ENST00000515662 CDC27P30260 824 aa18.05■□□□□ 0.48
THUMPD3-210ENST00000515662 WTAPQ15007 396 aa18.05■□□□□ 0.48
THUMPD3-210ENST00000515662 NID2Q14112 1375 aa18.05■□□□□ 0.48
THUMPD3-210ENST00000515662 GOLGA8AA7E2F4 631 aa18.05■□□□□ 0.48
THUMPD3-210ENST00000515662 CDKL5O76039 1030 aa18.05■□□□□ 0.48
THUMPD3-210ENST00000515662 ALDH1B1P30837 517 aa18.05■□□□□ 0.48
THUMPD3-210ENST00000515662 GUCY1B3Q02153 619 aa18.05■□□□□ 0.48
THUMPD3-210ENST00000515662 DIXDC1Q155Q3 683 aa18.05■□□□□ 0.48
THUMPD3-210ENST00000515662 CAMKK2Q96RR4 588 aa18.05■□□□□ 0.48
THUMPD3-210ENST00000515662 MYL10Q9BUA6 226 aa18.05■□□□□ 0.48
THUMPD3-210ENST00000515662 FAM217BQ9NTX9 383 aaPredicted RBP18.05■□□□□ 0.48
THUMPD3-210ENST00000515662 ERICH2A1L162 156 aa18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 EZH2Q15910 746 aaKnown RBP18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 SBK1Q52WX2 424 aa18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 TMTC2Q8N394 836 aa18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 MASTLQ96GX5 879 aa18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 UBAC1Q9BSL1 405 aa18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 SYCE3A1L190 88 aa18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 NTRK3Q16288 839 aa18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 CPLX2Q6PUV4 134 aaKnown RBP18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 SYNE3Q6ZMZ3 975 aa18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 CCDC144CPQ8IYA2 1237 aa18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 LEO1Q8WVC0 666 aaPredicted RBP18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 C8orf76Q96K31 380 aa18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 SPATA32Q96LK8 384 aa18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 ARPP21Q9UBL0 812 aaPredicted RBP18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 LAMB1P07942 1786 aa18.04■□□□□ 0.48
THUMPD3-210ENST00000515662 LDHCP07864 332 aa18.03■□□□□ 0.48
THUMPD3-210ENST00000515662 PPP4CP60510 307 aa18.03■□□□□ 0.48
THUMPD3-210ENST00000515662 EVX2Q03828 476 aa18.03■□□□□ 0.48
THUMPD3-210ENST00000515662 SLC15A2Q16348 729 aa18.03■□□□□ 0.48
THUMPD3-210ENST00000515662 SH3RF3Q8TEJ3 882 aaPredicted RBP18.03■□□□□ 0.48
THUMPD3-210ENST00000515662 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.03■□□□□ 0.48
THUMPD3-210ENST00000515662 MROH7-TTC4A0A0A0MT08 1334 aa18.03■□□□□ 0.48
THUMPD3-210ENST00000515662 BAG3O95817 575 aa18.03■□□□□ 0.48
THUMPD3-210ENST00000515662 EN1Q05925 392 aaPredicted RBP18.03■□□□□ 0.48
THUMPD3-210ENST00000515662 SEC23AQ15436 765 aa18.03■□□□□ 0.48
THUMPD3-210ENST00000515662 TPRNQ4KMQ1 711 aa18.03■□□□□ 0.48
THUMPD3-210ENST00000515662 FBXO18Q8NFZ0 1043 aa18.03■□□□□ 0.48
THUMPD3-210ENST00000515662 MKRN1Q9UHC7 482 aaKnown RBP18.03■□□□□ 0.48
THUMPD3-210ENST00000515662 TNKSO95271 1327 aa18.02■□□□□ 0.48
THUMPD3-210ENST00000515662 FAM205AQ6ZU69 1335 aa18.02■□□□□ 0.48
THUMPD3-210ENST00000515662 PRDM1O75626 825 aa18.02■□□□□ 0.48
THUMPD3-210ENST00000515662 CYP2D6P10635 497 aa18.02■□□□□ 0.48
THUMPD3-210ENST00000515662 LRSAM1Q6UWE0 723 aa18.02■□□□□ 0.48
THUMPD3-210ENST00000515662 OLFM4Q6UX06 510 aa18.02■□□□□ 0.48
THUMPD3-210ENST00000515662 MPNDQ8N594 471 aa18.02■□□□□ 0.48
THUMPD3-210ENST00000515662 RGS22Q8NE09 1264 aa18.02■□□□□ 0.48
THUMPD3-210ENST00000515662 CFAP45Q9UL16 551 aa18.02■□□□□ 0.48
THUMPD3-210ENST00000515662 ORC4O43929 436 aa18.02■□□□□ 0.47
THUMPD3-210ENST00000515662 OTUD7BQ6GQQ9 843 aa18.02■□□□□ 0.47
THUMPD3-210ENST00000515662 ILDR1Q86SU0 546 aaPredicted RBP18.02■□□□□ 0.47
THUMPD3-210ENST00000515662 TBC1D22AQ8WUA7 517 aa18.02■□□□□ 0.47
THUMPD3-210ENST00000515662 ZSCAN10Q96SZ4 725 aaPredicted RBP18.02■□□□□ 0.47
THUMPD3-210ENST00000515662 RTFDC1Q9BY42 306 aaPredicted RBP18.02■□□□□ 0.47
THUMPD3-210ENST00000515662 COA1Q9GZY4 146 aa18.02■□□□□ 0.47
THUMPD3-210ENST00000515662 MYH15Q9Y2K3 1946 aa18.01■□□□□ 0.47
THUMPD3-210ENST00000515662 RIMBP2O15034 1052 aa18.01■□□□□ 0.47
THUMPD3-210ENST00000515662 RANBP6O60518 1105 aaKnown RBP18.01■□□□□ 0.47
THUMPD3-210ENST00000515662 SLC3A2P08195 630 aaKnown RBP18.01■□□□□ 0.47
THUMPD3-210ENST00000515662 RCAN1P53805 252 aa18.01■□□□□ 0.47
THUMPD3-210ENST00000515662 MFSD14BQ5SR56 506 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms