RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 KBTBD3Q8NAB2 608 aa31.39■■■□□ 2.62
DDR1-279ENST00000515529 CCDC102AQ96A19 550 aa31.39■■■□□ 2.62
DDR1-279ENST00000515529 DDX4Q9NQI0 724 aaKnown RBP31.39■■■□□ 2.62
DDR1-279ENST00000515529 FZD1Q9UP38 647 aa31.39■■■□□ 2.62
DDR1-279ENST00000515529 ADD2P35612 726 aa31.38■■■□□ 2.61
DDR1-279ENST00000515529 MAP3K11Q16584 847 aa31.37■■■□□ 2.61
DDR1-279ENST00000515529 ZFPM1Q8IX07 1006 aa31.37■■■□□ 2.61
DDR1-279ENST00000515529 TGFBRAP1Q8WUH2 860 aa31.37■■■□□ 2.61
DDR1-279ENST00000515529 CSRNP1Q96S65 589 aa31.37■■■□□ 2.61
DDR1-279ENST00000515529 AK9Q5TCS8 1911 aa31.36■■■□□ 2.61
DDR1-279ENST00000515529 UBE3CQ15386 1083 aa31.36■■■□□ 2.61
DDR1-279ENST00000515529 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.36■■■□□ 2.61
DDR1-279ENST00000515529 TCRBV5S4A2TA0A5A2 114 aa31.35■■■□□ 2.61
DDR1-279ENST00000515529 USP2O75604 605 aaPredicted RBP31.35■■■□□ 2.61
DDR1-279ENST00000515529 USP5P45974 858 aa31.35■■■□□ 2.61
DDR1-279ENST00000515529 FSD1Q9BTV5 496 aa31.35■■■□□ 2.61
DDR1-279ENST00000515529 OSBPL5Q9H0X9 879 aaPredicted RBP31.35■■■□□ 2.61
DDR1-279ENST00000515529 UNCXA6NJT0 531 aa31.34■■■□□ 2.61
DDR1-279ENST00000515529 LDLRAD1Q5T700 205 aa31.34■■■□□ 2.61
DDR1-279ENST00000515529 MIGA2Q7L4E1 593 aa31.34■■■□□ 2.61
DDR1-279ENST00000515529 MAPKAPK5Q8IW41 473 aa31.34■■■□□ 2.61
DDR1-279ENST00000515529 ANKRD13AQ8IZ07 590 aa31.34■■■□□ 2.61
DDR1-279ENST00000515529 ZNF341Q9BYN7 854 aa31.34■■■□□ 2.61
DDR1-279ENST00000515529 CEP350Q5VT06 3117 aa31.34■■■□□ 2.61
DDR1-279ENST00000515529 ZFYP08048 801 aaPredicted RBP31.33■■■□□ 2.61
DDR1-279ENST00000515529 SLC10A4Q96EP9 437 aa31.33■■■□□ 2.61
DDR1-279ENST00000515529 CRNKL1Q9BZJ0 848 aaKnown RBP31.33■■■□□ 2.61
DDR1-279ENST00000515529 FLT1P17948 1338 aa31.32■■■□□ 2.6
DDR1-279ENST00000515529 NOGQ13253 232 aa31.32■■■□□ 2.6
DDR1-279ENST00000515529 PLEKHM2Q8IWE5 1019 aa31.32■■■□□ 2.6
DDR1-279ENST00000515529 RIOK1Q9BRS2 568 aaKnown RBP31.32■■■□□ 2.6
DDR1-279ENST00000515529 CSADQ9Y600 493 aa31.32■■■□□ 2.6
DDR1-279ENST00000515529 DDTLA6NHG4 134 aaPredicted RBP31.31■■■□□ 2.6
DDR1-279ENST00000515529 RNF113AO15541 343 aaKnown RBP31.31■■■□□ 2.6
DDR1-279ENST00000515529 SLC10A3P09131 477 aa31.31■■■□□ 2.6
DDR1-279ENST00000515529 MAP3K9P80192 1104 aa31.31■■■□□ 2.6
DDR1-279ENST00000515529 RASAL3Q86YV0 1011 aa31.31■■■□□ 2.6
DDR1-279ENST00000515529 JMYQ8N9B5 988 aa31.31■■■□□ 2.6
DDR1-279ENST00000515529 AIDAQ96BJ3 306 aa31.31■■■□□ 2.6
DDR1-279ENST00000515529 EVI5LQ96CN4 794 aa31.31■■■□□ 2.6
DDR1-279ENST00000515529 WRNIP1Q96S55 665 aa31.31■■■□□ 2.6
DDR1-279ENST00000515529 COL2A1P02458 1487 aaPredicted RBP31.3■■■□□ 2.6
DDR1-279ENST00000515529 SH3BP5LQ7L8J4 393 aa31.3■■■□□ 2.6
DDR1-279ENST00000515529 DHX36Q9H2U1 1008 aaKnown RBP31.3■■■□□ 2.6
DDR1-279ENST00000515529 MYH7P12883 1935 aa31.3■■■□□ 2.6
DDR1-279ENST00000515529 ATRNL1Q5VV63 1379 aa31.3■■■□□ 2.6
DDR1-279ENST00000515529 TRIM6-TRIM34B2RNG4 842 aa31.29■■■□□ 2.6
DDR1-279ENST00000515529 AOC2O75106 756 aa31.29■■■□□ 2.6
DDR1-279ENST00000515529 MBD4O95243 580 aa31.29■■■□□ 2.6
DDR1-279ENST00000515529 MAP2K2P36507 400 aa31.29■■■□□ 2.6
DDR1-279ENST00000515529 SLFNL1Q499Z3 407 aa31.29■■■□□ 2.6
DDR1-279ENST00000515529 ARMT1Q9H993 441 aa31.29■■■□□ 2.6
DDR1-279ENST00000515529 LCORLQ8N3X6 602 aa31.28■■■□□ 2.6
DDR1-279ENST00000515529 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.28■■■□□ 2.6
DDR1-279ENST00000515529 CLMNQ96JQ2 1002 aa31.28■■■□□ 2.6
DDR1-279ENST00000515529 TRIM34Q9BYJ4 488 aa31.28■■■□□ 2.6
DDR1-279ENST00000515529 OSBPL3Q9H4L5 887 aa31.28■■■□□ 2.6
DDR1-279ENST00000515529 FAM155AB1AL88 458 aaPredicted RBP31.27■■■□□ 2.6
DDR1-279ENST00000515529 HLA-DOAP06340 250 aa31.27■■■□□ 2.6
DDR1-279ENST00000515529 CENPQQ7L2Z9 268 aaPredicted RBP31.27■■■□□ 2.6
DDR1-279ENST00000515529 APPBP2Q92624 585 aa31.27■■■□□ 2.6
DDR1-279ENST00000515529 CCDC136Q96JN2 1154 aa31.27■■■□□ 2.6
DDR1-279ENST00000515529 SAP30BPQ9UHR5 308 aaKnown RBP31.27■■■□□ 2.6
DDR1-279ENST00000515529 CHGBP05060 677 aa31.26■■■□□ 2.59
DDR1-279ENST00000515529 MAP2K1Q02750 393 aaPredicted RBP31.25■■■□□ 2.59
DDR1-279ENST00000515529 VGLL4Q14135 290 aa31.25■■■□□ 2.59
DDR1-279ENST00000515529 RILPL2Q969X0 211 aa31.25■■■□□ 2.59
DDR1-279ENST00000515529 DDRGK1Q96HY6 314 aa31.25■■■□□ 2.59
DDR1-279ENST00000515529 ELP3Q9H9T3 547 aa31.25■■■□□ 2.59
DDR1-279ENST00000515529 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.25■■■□□ 2.59
DDR1-279ENST00000515529 PI4KBQ9UBF8 816 aa31.25■■■□□ 2.59
DDR1-279ENST00000515529 PALD1Q9ULE6 856 aa31.25■■■□□ 2.59
DDR1-279ENST00000515529 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.24■■■□□ 2.59
DDR1-279ENST00000515529 PUS7LQ9H0K6 701 aaKnown RBP31.24■■■□□ 2.59
DDR1-279ENST00000515529 MKRN3Q13064 507 aaKnown RBP31.23■■■□□ 2.59
DDR1-279ENST00000515529 CRACR2BQ8N4Y2 399 aaPredicted RBP31.23■■■□□ 2.59
DDR1-279ENST00000515529 BEGAINQ9BUH8 593 aa31.23■■■□□ 2.59
DDR1-279ENST00000515529 FOCADQ5VW36 1801 aa31.22■■■□□ 2.59
DDR1-279ENST00000515529 TBC1D12O60347 775 aa31.22■■■□□ 2.59
DDR1-279ENST00000515529 PDE4AP27815 886 aa31.22■■■□□ 2.59
DDR1-279ENST00000515529 SPRYD7Q5W111 196 aa31.22■■■□□ 2.59
DDR1-279ENST00000515529 SDR42E1Q8WUS8 393 aa31.22■■■□□ 2.59
DDR1-279ENST00000515529 ZKSCAN4Q969J2 545 aaPredicted RBP31.22■■■□□ 2.59
DDR1-279ENST00000515529 HERC5Q9UII4 1024 aaKnown RBP31.22■■■□□ 2.59
DDR1-279ENST00000515529 ZNF112Q9UJU3 913 aa31.22■■■□□ 2.59
DDR1-279ENST00000515529 SLC4A4Q9Y6R1 1079 aa31.22■■■□□ 2.59
DDR1-279ENST00000515529 CDK5RAP2Q96SN8 1893 aa31.22■■■□□ 2.59
DDR1-279ENST00000515529 POLR3DP05423 398 aaPredicted RBP31.21■■■□□ 2.59
DDR1-279ENST00000515529 INPP5BP32019 993 aa31.21■■■□□ 2.59
DDR1-279ENST00000515529 KIF23Q02241 960 aaPredicted RBP31.21■■■□□ 2.59
DDR1-279ENST00000515529 SLC4A8Q2Y0W8 1093 aa31.21■■■□□ 2.59
DDR1-279ENST00000515529 TTC6Q86TZ1 520 aa31.21■■■□□ 2.59
DDR1-279ENST00000515529 OSBP2Q969R2 916 aa31.21■■■□□ 2.59
DDR1-279ENST00000515529 WNK4Q96J92 1243 aa31.21■■■□□ 2.59
DDR1-279ENST00000515529 ATP8A2Q9NTI2 1148 aa31.21■■■□□ 2.59
DDR1-279ENST00000515529 MCM9Q9NXL9 1143 aa31.21■■■□□ 2.59
DDR1-279ENST00000515529 OTOFQ9HC10 1997 aa31.2■■■□□ 2.59
DDR1-279ENST00000515529 ZBTB48P10074 688 aaPredicted RBP31.2■■■□□ 2.59
DDR1-279ENST00000515529 MAP3K10Q02779 954 aa31.2■■■□□ 2.59
DDR1-279ENST00000515529 FOXP4Q8IVH2 680 aaPredicted RBP31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms