RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 FAM83AQ86UY5 434 aa17.17■□□□□ 0.34
SMAD1-216ENST00000515527 MPHOSPH8Q99549 860 aa17.17■□□□□ 0.34
SMAD1-216ENST00000515527 CWC25Q9NXE8 425 aaPredicted RBP17.17■□□□□ 0.34
SMAD1-216ENST00000515527 CACNA1GO43497 2377 aa17.17■□□□□ 0.34
SMAD1-216ENST00000515527 HSPA5P11021 654 aaKnown RBP17.16■□□□□ 0.34
SMAD1-216ENST00000515527 ZKSCAN1P17029 563 aaPredicted RBP17.16■□□□□ 0.34
SMAD1-216ENST00000515527 CCDC129Q6ZRS4 1044 aa17.16■□□□□ 0.34
SMAD1-216ENST00000515527 PDLIM7Q9NR12 457 aa17.16■□□□□ 0.34
SMAD1-216ENST00000515527 ZNF112Q9UJU3 913 aa17.16■□□□□ 0.34
SMAD1-216ENST00000515527 ZHX2Q9Y6X8 837 aa17.16■□□□□ 0.34
SMAD1-216ENST00000515527 PI4K2BG5E9Z4 385 aa17.15■□□□□ 0.34
SMAD1-216ENST00000515527 EPHB4P54760 987 aa17.15■□□□□ 0.34
SMAD1-216ENST00000515527 CHRNDQ07001 517 aa17.15■□□□□ 0.34
SMAD1-216ENST00000515527 NOL9Q5SY16 702 aaKnown RBP17.15■□□□□ 0.34
SMAD1-216ENST00000515527 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
SMAD1-216ENST00000515527 SH3RF1Q7Z6J0 888 aa17.15■□□□□ 0.34
SMAD1-216ENST00000515527 DBF4Q9UBU7 674 aaPredicted RBP17.15■□□□□ 0.34
SMAD1-216ENST00000515527 CHD9Q3L8U1 2897 aa17.15■□□□□ 0.34
SMAD1-216ENST00000515527 RLFQ13129 1914 aa17.14■□□□□ 0.33
SMAD1-216ENST00000515527 TRIM43BA6NCK2 446 aa17.14■□□□□ 0.33
SMAD1-216ENST00000515527 GOLGA2Q08379 1002 aa17.14■□□□□ 0.33
SMAD1-216ENST00000515527 TRMT44Q8IYL2 757 aaKnown RBP17.14■□□□□ 0.33
SMAD1-216ENST00000515527 TRIM43Q96BQ3 446 aaPredicted RBP17.14■□□□□ 0.33
SMAD1-216ENST00000515527 PNMA3Q9UL41 463 aa17.14■□□□□ 0.33
SMAD1-216ENST00000515527 RPAP1Q9BWH6 1393 aaPredicted RBP17.14■□□□□ 0.33
SMAD1-216ENST00000515527 PTPRFP10586 1907 aa17.13■□□□□ 0.33
SMAD1-216ENST00000515527 LRRC37A2A6NM11 1700 aa17.13■□□□□ 0.33
SMAD1-216ENST00000515527 TAF5LO75529 589 aa17.13■□□□□ 0.33
SMAD1-216ENST00000515527 NFE2L2Q16236 605 aa17.13■□□□□ 0.33
SMAD1-216ENST00000515527 CSPP1Q1MSJ5 1256 aa17.13■□□□□ 0.33
SMAD1-216ENST00000515527 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
SMAD1-216ENST00000515527 C15orf52Q6ZUT6 534 aaKnown RBP17.13■□□□□ 0.33
SMAD1-216ENST00000515527 NUDT12Q9BQG2 462 aa17.13■□□□□ 0.33
SMAD1-216ENST00000515527 KCNH6Q9H252 994 aa17.13■□□□□ 0.33
SMAD1-216ENST00000515527 HYPKQ9NX55 129 aa17.13■□□□□ 0.33
SMAD1-216ENST00000515527 PER1O15534 1290 aaPredicted RBP17.12■□□□□ 0.33
SMAD1-216ENST00000515527 XRCC5P13010 732 aaKnown RBP17.12■□□□□ 0.33
SMAD1-216ENST00000515527 PBX2P40425 430 aa17.12■□□□□ 0.33
SMAD1-216ENST00000515527 TRIM60Q495X7 471 aa17.12■□□□□ 0.33
SMAD1-216ENST00000515527 SLC39A5Q6ZMH5 540 aa17.12■□□□□ 0.33
SMAD1-216ENST00000515527 PBX4Q9BYU1 374 aa17.12■□□□□ 0.33
SMAD1-216ENST00000515527 AGTPBP1Q9UPW5 1226 aa17.12■□□□□ 0.33
SMAD1-216ENST00000515527 DNM1LO00429 736 aa17.11■□□□□ 0.33
SMAD1-216ENST00000515527 ERC2O15083 957 aa17.11■□□□□ 0.33
SMAD1-216ENST00000515527 GCLCP48506 637 aaPredicted RBP17.11■□□□□ 0.33
SMAD1-216ENST00000515527 PICK1Q9NRD5 415 aa17.11■□□□□ 0.33
SMAD1-216ENST00000515527 USP34Q70CQ2 3546 aa17.11■□□□□ 0.33
SMAD1-216ENST00000515527 FKBP1CQ5VVH2 108 aa17.1■□□□□ 0.33
SMAD1-216ENST00000515527 SOCS4Q8WXH5 440 aa17.1■□□□□ 0.33
SMAD1-216ENST00000515527 AFG3L2Q9Y4W6 797 aa17.1■□□□□ 0.33
SMAD1-216ENST00000515527 CHD7Q9P2D1 2997 aa17.09■□□□□ 0.33
SMAD1-216ENST00000515527 GRXCR1A8MXD5 290 aa17.09■□□□□ 0.33
SMAD1-216ENST00000515527 TLL1O43897 1013 aa17.09■□□□□ 0.33
SMAD1-216ENST00000515527 ITGA6P23229 1130 aa17.09■□□□□ 0.33
SMAD1-216ENST00000515527 FPGSQ05932 587 aa17.09■□□□□ 0.33
SMAD1-216ENST00000515527 CCL14Q16627 93 aa17.09■□□□□ 0.33
SMAD1-216ENST00000515527 LPAR1Q92633 364 aa17.09■□□□□ 0.33
SMAD1-216ENST00000515527 TEKT1Q969V4 418 aa17.09■□□□□ 0.33
SMAD1-216ENST00000515527 PHOX2BQ99453 314 aa17.09■□□□□ 0.33
SMAD1-216ENST00000515527 BABAM1Q9NWV8 329 aa17.09■□□□□ 0.33
SMAD1-216ENST00000515527 CACNA1BQ00975 2339 aa17.09■□□□□ 0.33
SMAD1-216ENST00000515527 SPTBN4Q9H254 2564 aa17.09■□□□□ 0.33
SMAD1-216ENST00000515527 TRIM75PA6NK02 468 aa17.08■□□□□ 0.32
SMAD1-216ENST00000515527 PTPRAP18433 802 aa17.08■□□□□ 0.32
SMAD1-216ENST00000515527 ITGB8P26012 769 aa17.08■□□□□ 0.32
SMAD1-216ENST00000515527 CNGA1P29973 690 aa17.08■□□□□ 0.32
SMAD1-216ENST00000515527 TREML2Q5T2D2 321 aa17.08■□□□□ 0.32
SMAD1-216ENST00000515527 RAG1P15918 1043 aa17.07■□□□□ 0.32
SMAD1-216ENST00000515527 GJC2Q5T442 439 aaPredicted RBP17.07■□□□□ 0.32
SMAD1-216ENST00000515527 SCYL3Q8IZE3 742 aa17.07■□□□□ 0.32
SMAD1-216ENST00000515527 HERVK_113Q902F9 699 aa17.07■□□□□ 0.32
SMAD1-216ENST00000515527 DDX20Q9UHI6 824 aaKnown RBP17.07■□□□□ 0.32
SMAD1-216ENST00000515527 TCP10Q12799 353 aa17.06■□□□□ 0.32
SMAD1-216ENST00000515527 FAM151AQ8WW52 585 aa17.06■□□□□ 0.32
SMAD1-216ENST00000515527 TACC3Q9Y6A5 838 aa17.06■□□□□ 0.32
SMAD1-216ENST00000515527 KBTBD13C9JR72 458 aa17.05■□□□□ 0.32
SMAD1-216ENST00000515527 MSCO60682 206 aa17.05■□□□□ 0.32
SMAD1-216ENST00000515527 HDLBPQ00341 1268 aaKnown RBP17.05■□□□□ 0.32
SMAD1-216ENST00000515527 MSRAQ9UJ68 235 aa17.05■□□□□ 0.32
SMAD1-216ENST00000515527 DAGLAQ9Y4D2 1042 aa17.05■□□□□ 0.32
SMAD1-216ENST00000515527 A0A1B0GUL6 1792 aa17.05■□□□□ 0.32
SMAD1-216ENST00000515527 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
SMAD1-216ENST00000515527 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
SMAD1-216ENST00000515527 RGS2P41220 211 aa17.04■□□□□ 0.32
SMAD1-216ENST00000515527 GRIK5Q16478 980 aa17.04■□□□□ 0.32
SMAD1-216ENST00000515527 TDRD7Q8NHU6 1098 aaKnown RBP17.04■□□□□ 0.32
SMAD1-216ENST00000515527 ZDHHC15Q96MV8 337 aa17.04■□□□□ 0.32
SMAD1-216ENST00000515527 CD320Q9NPF0 282 aa17.04■□□□□ 0.32
SMAD1-216ENST00000515527 COG5Q9UP83 839 aa17.04■□□□□ 0.32
SMAD1-216ENST00000515527 C5orf42Q9H799 3197 aa17.04■□□□□ 0.32
SMAD1-216ENST00000515527 TLE2Q04725 743 aa17.03■□□□□ 0.32
SMAD1-216ENST00000515527 SNX17Q15036 470 aa17.03■□□□□ 0.32
SMAD1-216ENST00000515527 ARRDC4Q8NCT1 418 aa17.03■□□□□ 0.32
SMAD1-216ENST00000515527 PHAXQ9H814 394 aaKnown RBP17.03■□□□□ 0.32
SMAD1-216ENST00000515527 SLC28A3Q9HAS3 691 aa17.03■□□□□ 0.32
SMAD1-216ENST00000515527 PHIPQ8WWQ0 1821 aa17.03■□□□□ 0.32
SMAD1-216ENST00000515527 PRRC2BQ5JSZ5 2229 aaKnown RBP17.02■□□□□ 0.32
SMAD1-216ENST00000515527 MAPK8IP3Q9UPT6 1336 aa17.02■□□□□ 0.32
SMAD1-216ENST00000515527 PLIN1O60240 522 aa17.02■□□□□ 0.32
SMAD1-216ENST00000515527 CLTBP09497 229 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms