RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 COL13A1Q5TAT6 717 aaPredicted RBP14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 CCDC129Q6ZRS4 1044 aa14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 FAM83AQ86UY5 434 aa14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 TEX11Q8IYF3 940 aa14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 TRPM4Q8TD43 1214 aa14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 MAP4K1Q92918 833 aa14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 LSG1Q9H089 658 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 TDRD3Q9H7E2 651 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 TMOD2Q9NZR1 351 aa14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 ATRNL1Q5VV63 1379 aa14.34□□□□□ -0.11
PDLIM5-220ENST00000514830 KIAA1211Q6ZU35 1233 aa14.33□□□□□ -0.12
PDLIM5-220ENST00000514830 BACH2Q9BYV9 841 aa14.33□□□□□ -0.12
PDLIM5-220ENST00000514830 NACAP1Q9BZK3 213 aa14.33□□□□□ -0.12
PDLIM5-220ENST00000514830 DCP1AQ9NPI6 582 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-220ENST00000514830 SLC4A4Q9Y6R1 1079 aa14.33□□□□□ -0.12
PDLIM5-220ENST00000514830 SIPA1L1O43166 1804 aa14.33□□□□□ -0.12
PDLIM5-220ENST00000514830 FLT1P17948 1338 aa14.33□□□□□ -0.12
PDLIM5-220ENST00000514830 HTRA3P83110 453 aa14.32□□□□□ -0.12
PDLIM5-220ENST00000514830 TNFAIP1Q13829 316 aa14.32□□□□□ -0.12
PDLIM5-220ENST00000514830 SBK1Q52WX2 424 aa14.32□□□□□ -0.12
PDLIM5-220ENST00000514830 VPS53Q5VIR6 699 aa14.32□□□□□ -0.12
PDLIM5-220ENST00000514830 APOBEC3FQ8IUX4 373 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-220ENST00000514830 IFNL3Q8IZI9 196 aa14.32□□□□□ -0.12
PDLIM5-220ENST00000514830 EPB41L4AQ9HCS5 686 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-220ENST00000514830 FAM198AQ9UFP1 575 aa14.32□□□□□ -0.12
PDLIM5-220ENST00000514830 PPP2R3BQ9Y5P8 575 aa14.32□□□□□ -0.12
PDLIM5-220ENST00000514830 PRKAB2O43741 272 aa14.31□□□□□ -0.12
PDLIM5-220ENST00000514830 USP5P45974 858 aa14.31□□□□□ -0.12
PDLIM5-220ENST00000514830 TGFBRAP1Q8WUH2 860 aa14.31□□□□□ -0.12
PDLIM5-220ENST00000514830 FAM151AQ8WW52 585 aa14.31□□□□□ -0.12
PDLIM5-220ENST00000514830 DDRGK1Q96HY6 314 aa14.31□□□□□ -0.12
PDLIM5-220ENST00000514830 OSBPL5Q9H0X9 879 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-220ENST00000514830 DHX36Q9H2U1 1008 aaKnown RBP14.31□□□□□ -0.12
PDLIM5-220ENST00000514830 ANO2Q9NQ90 1003 aa14.31□□□□□ -0.12
PDLIM5-220ENST00000514830 DDX4Q9NQI0 724 aaKnown RBP14.31□□□□□ -0.12
PDLIM5-220ENST00000514830 CTNNA3Q9UI47 895 aa14.31□□□□□ -0.12
PDLIM5-220ENST00000514830 U3KPZ7 1027 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-220ENST00000514830 CNTNAP1P78357 1384 aa14.31□□□□□ -0.12
PDLIM5-220ENST00000514830 MYH8P13535 1937 aa14.31□□□□□ -0.12
PDLIM5-220ENST00000514830 FGAP02671 866 aa14.3□□□□□ -0.12
PDLIM5-220ENST00000514830 TNNI2P48788 182 aa14.3□□□□□ -0.12
PDLIM5-220ENST00000514830 PTH1RQ03431 593 aa14.3□□□□□ -0.12
PDLIM5-220ENST00000514830 NFIAQ12857 509 aa14.3□□□□□ -0.12
PDLIM5-220ENST00000514830 RBM26Q5T8P6 1007 aaKnown RBP14.3□□□□□ -0.12
PDLIM5-220ENST00000514830 SDR42E1Q8WUS8 393 aa14.3□□□□□ -0.12
PDLIM5-220ENST00000514830 USP26Q9BXU7 913 aa14.3□□□□□ -0.12
PDLIM5-220ENST00000514830 ARPP21Q9UBL0 812 aaPredicted RBP14.3□□□□□ -0.12
PDLIM5-220ENST00000514830 ANAPC4Q9UJX5 808 aa14.3□□□□□ -0.12
PDLIM5-220ENST00000514830 ROBO3Q96MS0 1386 aa14.3□□□□□ -0.12
PDLIM5-220ENST00000514830 CLRN2A0PK11 232 aa14.29□□□□□ -0.12
PDLIM5-220ENST00000514830 NECTIN1Q15223 517 aa14.29□□□□□ -0.12
PDLIM5-220ENST00000514830 ANGEL2Q5VTE6 544 aaKnown RBP14.29□□□□□ -0.12
PDLIM5-220ENST00000514830 METTL16Q86W50 562 aaKnown RBP14.29□□□□□ -0.12
PDLIM5-220ENST00000514830 KCNB2Q92953 911 aa14.29□□□□□ -0.12
PDLIM5-220ENST00000514830 EHD4Q9H223 541 aa14.29□□□□□ -0.12
PDLIM5-220ENST00000514830 GGA3Q9NZ52 723 aa14.29□□□□□ -0.12
PDLIM5-220ENST00000514830 ASTN2O75129 1339 aaPredicted RBP14.28□□□□□ -0.12
PDLIM5-220ENST00000514830 SEC24BO95487 1268 aa14.28□□□□□ -0.12
PDLIM5-220ENST00000514830 APPP05067 770 aa14.28□□□□□ -0.12
PDLIM5-220ENST00000514830 NT5C2P49902 561 aa14.28□□□□□ -0.12
PDLIM5-220ENST00000514830 TSGA10IPQ3SY00 556 aa14.28□□□□□ -0.12
PDLIM5-220ENST00000514830 C12orf60Q5U649 245 aa14.28□□□□□ -0.12
PDLIM5-220ENST00000514830 CTR9Q6PD62 1173 aa14.28□□□□□ -0.12
PDLIM5-220ENST00000514830 TTC6Q86TZ1 520 aa14.28□□□□□ -0.12
PDLIM5-220ENST00000514830 LDHDQ86WU2 507 aa14.28□□□□□ -0.12
PDLIM5-220ENST00000514830 MAPKAPK5Q8IW41 473 aa14.28□□□□□ -0.12
PDLIM5-220ENST00000514830 IL17RAQ96F46 866 aa14.28□□□□□ -0.12
PDLIM5-220ENST00000514830 NAPBQ9H115 298 aa14.28□□□□□ -0.12
PDLIM5-220ENST00000514830 RBM8AQ9Y5S9 174 aaKnown RBP14.28□□□□□ -0.12
PDLIM5-220ENST00000514830 TCP10L2B9ZVM9 353 aa14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 HSPA1AP0DMV8 641 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 HSPA1BP0DMV9 641 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 PCP11498 1178 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 HSPA4P34932 840 aa14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 TDO2P48775 406 aa14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 CACNB3P54284 484 aa14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 MAP3K10Q02779 954 aa14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 RASA3Q14644 834 aa14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 AMOTL1Q8IY63 956 aa14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 DCPSQ96C86 337 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 TEPSINQ96N21 525 aa14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 DEFB129Q9H1M3 183 aa14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 VEZTQ9HBM0 779 aa14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 MCM9Q9NXL9 1143 aa14.27□□□□□ -0.13
PDLIM5-220ENST00000514830 USP17L12C9JPN9 530 aa14.26□□□□□ -0.13
PDLIM5-220ENST00000514830 USP17L21D6R901 530 aa14.26□□□□□ -0.13
PDLIM5-220ENST00000514830 TBC1D12O60347 775 aa14.26□□□□□ -0.13
PDLIM5-220ENST00000514830 FGRP09769 529 aa14.26□□□□□ -0.13
PDLIM5-220ENST00000514830 PICALMQ13492 652 aa14.26□□□□□ -0.13
PDLIM5-220ENST00000514830 IMMTQ16891 758 aaKnown RBP14.26□□□□□ -0.13
PDLIM5-220ENST00000514830 SH3BP5LQ7L8J4 393 aa14.26□□□□□ -0.13
PDLIM5-220ENST00000514830 ZFPM1Q8IX07 1006 aa14.26□□□□□ -0.13
PDLIM5-220ENST00000514830 HOOK2Q96ED9 719 aa14.26□□□□□ -0.13
PDLIM5-220ENST00000514830 PI4KBQ9UBF8 816 aa14.26□□□□□ -0.13
PDLIM5-220ENST00000514830 TRPM7Q96QT4 1865 aa14.26□□□□□ -0.13
PDLIM5-220ENST00000514830 PAPPA2Q9BXP8 1791 aa14.26□□□□□ -0.13
PDLIM5-220ENST00000514830 ANAPC15P60006 121 aa14.25□□□□□ -0.13
PDLIM5-220ENST00000514830 GABPAQ06546 454 aa14.25□□□□□ -0.13
PDLIM5-220ENST00000514830 PPARAQ07869 468 aa14.25□□□□□ -0.13
PDLIM5-220ENST00000514830 EAPPQ56P03 285 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms