RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 COA7Q96BR5 231 aa12.78□□□□□ -0.36
DDR1-276ENST00000514534 BICC1Q9H694 974 aaKnown RBP12.78□□□□□ -0.36
DDR1-276ENST00000514534 PAK6Q9NQU5 681 aaPredicted RBP12.78□□□□□ -0.36
DDR1-276ENST00000514534 DAGLAQ9Y4D2 1042 aa12.78□□□□□ -0.36
DDR1-276ENST00000514534 UTYO14607 1347 aa12.78□□□□□ -0.36
DDR1-276ENST00000514534 DOCK1Q14185 1865 aa12.77□□□□□ -0.37
DDR1-276ENST00000514534 NBPF7P0C2Y1 421 aaPredicted RBP12.77□□□□□ -0.37
DDR1-276ENST00000514534 SLC5A1P13866 664 aa12.77□□□□□ -0.37
DDR1-276ENST00000514534 ELNP15502 786 aa12.77□□□□□ -0.37
DDR1-276ENST00000514534 GADL1Q6ZQY3 521 aa12.77□□□□□ -0.37
DDR1-276ENST00000514534 ANKLE1Q8NAG6 615 aa12.77□□□□□ -0.37
DDR1-276ENST00000514534 PAWRQ96IZ0 340 aaKnown RBP12.77□□□□□ -0.37
DDR1-276ENST00000514534 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
DDR1-276ENST00000514534 ZHX2Q9Y6X8 837 aa12.77□□□□□ -0.37
DDR1-276ENST00000514534 MYH2Q9UKX2 1941 aa12.76□□□□□ -0.37
DDR1-276ENST00000514534 PTPRAP18433 802 aa12.76□□□□□ -0.37
DDR1-276ENST00000514534 FGFR2P21802 821 aa12.76□□□□□ -0.37
DDR1-276ENST00000514534 NFIAQ12857 509 aa12.76□□□□□ -0.37
DDR1-276ENST00000514534 LPIN2Q92539 896 aa12.76□□□□□ -0.37
DDR1-276ENST00000514534 GDF15Q99988 308 aa12.76□□□□□ -0.37
DDR1-276ENST00000514534 USP40Q9NVE5 1235 aa12.76□□□□□ -0.37
DDR1-276ENST00000514534 FAM198AQ9UFP1 575 aa12.76□□□□□ -0.37
DDR1-276ENST00000514534 PNMA3Q9UL41 463 aa12.76□□□□□ -0.37
DDR1-276ENST00000514534 TAOK2Q9UL54 1235 aa12.76□□□□□ -0.37
DDR1-276ENST00000514534 AFG3L2Q9Y4W6 797 aa12.76□□□□□ -0.37
DDR1-276ENST00000514534 LRRFIP2Q9Y608 721 aaKnown RBP12.76□□□□□ -0.37
DDR1-276ENST00000514534 RANBP2P49792 3224 aaKnown RBP12.76□□□□□ -0.37
DDR1-276ENST00000514534 LDHBP07195 334 aaKnown RBP12.75□□□□□ -0.37
DDR1-276ENST00000514534 PHIPQ8WWQ0 1821 aa12.75□□□□□ -0.37
DDR1-276ENST00000514534 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.75□□□□□ -0.37
DDR1-276ENST00000514534 GNL3LQ9NVN8 582 aaKnown RBP12.75□□□□□ -0.37
DDR1-276ENST00000514534 PHF20L1A8MW92 1017 aa12.74□□□□□ -0.37
DDR1-276ENST00000514534 CTNND1O60716 968 aaKnown RBP12.74□□□□□ -0.37
DDR1-276ENST00000514534 ENTPD3O75355 529 aa12.74□□□□□ -0.37
DDR1-276ENST00000514534 HMGCRP04035 888 aa12.74□□□□□ -0.37
DDR1-276ENST00000514534 DIXDC1Q155Q3 683 aa12.74□□□□□ -0.37
DDR1-276ENST00000514534 FAM110CQ1W6H9 321 aa12.74□□□□□ -0.37
DDR1-276ENST00000514534 LRIT3Q3SXY7 679 aa12.74□□□□□ -0.37
DDR1-276ENST00000514534 C7orf61Q8IZ16 206 aa12.74□□□□□ -0.37
DDR1-276ENST00000514534 DEFB123Q8N688 67 aa12.74□□□□□ -0.37
DDR1-276ENST00000514534 ANKRD44Q8N8A2 993 aa12.74□□□□□ -0.37
DDR1-276ENST00000514534 STXBP5LQ9Y2K9 1186 aa12.74□□□□□ -0.37
DDR1-276ENST00000514534 ATRNL1Q5VV63 1379 aa12.73□□□□□ -0.37
DDR1-276ENST00000514534 RPTORQ8N122 1335 aa12.73□□□□□ -0.37
DDR1-276ENST00000514534 SALL1Q9NSC2 1324 aa12.73□□□□□ -0.37
DDR1-276ENST00000514534 EYA2O00167 538 aa12.73□□□□□ -0.37
DDR1-276ENST00000514534 PRDX5P30044 214 aa12.73□□□□□ -0.37
DDR1-276ENST00000514534 ZSCAN29Q8IWY8 852 aaPredicted RBP12.73□□□□□ -0.37
DDR1-276ENST00000514534 ZGPATQ8N5A5 531 aaKnown RBP12.73□□□□□ -0.37
DDR1-276ENST00000514534 ANKRD13CQ8N6S4 541 aa12.73□□□□□ -0.37
DDR1-276ENST00000514534 KLHDC4Q8TBB5 520 aa12.73□□□□□ -0.37
DDR1-276ENST00000514534 IDI2Q9BXS1 227 aa12.73□□□□□ -0.37
DDR1-276ENST00000514534 NBPF3Q9H094 633 aa12.73□□□□□ -0.37
DDR1-276ENST00000514534 HMX1Q9NP08 348 aaPredicted RBP12.73□□□□□ -0.37
DDR1-276ENST00000514534 AGTPBP1Q9UPW5 1226 aa12.73□□□□□ -0.37
DDR1-276ENST00000514534 SALL2Q9Y467 1007 aaPredicted RBP12.73□□□□□ -0.37
DDR1-276ENST00000514534 DDX60LQ5H9U9 1706 aaKnown RBP12.73□□□□□ -0.37
DDR1-276ENST00000514534 TRIM75PA6NK02 468 aa12.72□□□□□ -0.37
DDR1-276ENST00000514534 SEMA3EO15041 775 aa12.72□□□□□ -0.37
DDR1-276ENST00000514534 GCLCP48506 637 aaPredicted RBP12.72□□□□□ -0.37
DDR1-276ENST00000514534 RGS3P49796 1198 aa12.72□□□□□ -0.37
DDR1-276ENST00000514534 MAP3K10Q02779 954 aa12.72□□□□□ -0.37
DDR1-276ENST00000514534 SLF2Q8IX21 1173 aa12.72□□□□□ -0.37
DDR1-276ENST00000514534 TDHQ8IZJ6 230 aa12.72□□□□□ -0.37
DDR1-276ENST00000514534 DIS3LQ8TF46 1054 aaKnown RBP12.72□□□□□ -0.37
DDR1-276ENST00000514534 SPINK5Q9NQ38 1064 aaPredicted RBP12.72□□□□□ -0.37
DDR1-276ENST00000514534 DENND2AQ9ULE3 1009 aa12.72□□□□□ -0.37
DDR1-276ENST00000514534 ZMYND8Q9ULU4 1186 aaPredicted RBP12.72□□□□□ -0.37
DDR1-276ENST00000514534 PABPC4Q13310 644 aaKnown RBP eCLIP12.71□□□□□ -0.37
DDR1-276ENST00000514534 CCDC184Q52MB2 194 aa12.71□□□□□ -0.37
DDR1-276ENST00000514534 ZFPM1Q8IX07 1006 aa12.71□□□□□ -0.37
DDR1-276ENST00000514534 PROCA1Q8NCQ7 364 aaPredicted RBP12.71□□□□□ -0.37
DDR1-276ENST00000514534 TBC1D2Q9BYX2 928 aa12.71□□□□□ -0.37
DDR1-276ENST00000514534 C11orf49Q9H6J7 331 aa12.71□□□□□ -0.37
DDR1-276ENST00000514534 FBXO3Q9UK99 471 aa12.71□□□□□ -0.37
DDR1-276ENST00000514534 CUL9Q8IWT3 2517 aa12.71□□□□□ -0.37
DDR1-276ENST00000514534 LOC285556D6RIA3 1793 aa12.71□□□□□ -0.38
DDR1-276ENST00000514534 ATAD5Q96QE3 1844 aa12.7□□□□□ -0.38
DDR1-276ENST00000514534 MAGEA10P43363 369 aaPredicted RBP12.7□□□□□ -0.38
DDR1-276ENST00000514534 MTMR10Q9NXD2 777 aa12.7□□□□□ -0.38
DDR1-276ENST00000514534 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
DDR1-276ENST00000514534 RFX7Q2KHR2 1363 aa12.69□□□□□ -0.38
DDR1-276ENST00000514534 GAKO14976 1311 aa12.69□□□□□ -0.38
DDR1-276ENST00000514534 PTPRCP08575 1304 aa12.69□□□□□ -0.38
DDR1-276ENST00000514534 ZBTB22O15209 634 aa12.69□□□□□ -0.38
DDR1-276ENST00000514534 SYN1P17600 705 aa12.69□□□□□ -0.38
DDR1-276ENST00000514534 ATP2B3Q16720 1220 aa12.69□□□□□ -0.38
DDR1-276ENST00000514534 Q7L0L9 218 aa12.69□□□□□ -0.38
DDR1-276ENST00000514534 DZIP1Q86YF9 867 aaKnown RBP12.69□□□□□ -0.38
DDR1-276ENST00000514534 UBE2OQ9C0C9 1292 aaKnown RBP12.69□□□□□ -0.38
DDR1-276ENST00000514534 OSBPL5Q9H0X9 879 aaPredicted RBP12.69□□□□□ -0.38
DDR1-276ENST00000514534 OGDHLQ9ULD0 1010 aa12.69□□□□□ -0.38
DDR1-276ENST00000514534 DDTLA6NHG4 134 aaPredicted RBP12.68□□□□□ -0.38
DDR1-276ENST00000514534 TBC1D12O60347 775 aa12.68□□□□□ -0.38
DDR1-276ENST00000514534 RFX5P48382 616 aaPredicted RBP12.68□□□□□ -0.38
DDR1-276ENST00000514534 TREML2Q5T2D2 321 aa12.68□□□□□ -0.38
DDR1-276ENST00000514534 SH3BP5LQ7L8J4 393 aa12.68□□□□□ -0.38
DDR1-276ENST00000514534 MRS2Q9HD23 443 aa12.68□□□□□ -0.38
DDR1-276ENST00000514534 CEP126Q9P2H0 1117 aa12.68□□□□□ -0.38
DDR1-276ENST00000514534 COL6A3P12111 3177 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms