RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 MINDY4BA8MYZ0 360 aa17.5■□□□□ 0.39
VCAN-211ENST00000513984 CPLX1O14810 134 aa17.5■□□□□ 0.39
VCAN-211ENST00000513984 IFIT3O14879 490 aaKnown RBP17.5■□□□□ 0.39
VCAN-211ENST00000513984 MMP10P09238 476 aa17.5■□□□□ 0.39
VCAN-211ENST00000513984 FGRP09769 529 aa17.5■□□□□ 0.39
VCAN-211ENST00000513984 XRCC6P12956 609 aaKnown RBP eCLIP17.5■□□□□ 0.39
VCAN-211ENST00000513984 NPR1P16066 1061 aa17.5■□□□□ 0.39
VCAN-211ENST00000513984 METAP2P50579 478 aaKnown RBP eCLIP17.5■□□□□ 0.39
VCAN-211ENST00000513984 SART3Q15020 963 aaKnown RBP17.5■□□□□ 0.39
VCAN-211ENST00000513984 POTEAQ6S8J7 498 aa17.5■□□□□ 0.39
VCAN-211ENST00000513984 RGS22Q8NE09 1264 aa17.5■□□□□ 0.39
VCAN-211ENST00000513984 ATP6V0A2Q9Y487 856 aa17.5■□□□□ 0.39
VCAN-211ENST00000513984 PARP3Q9Y6F1 533 aa17.5■□□□□ 0.39
VCAN-211ENST00000513984 ZBTB43O43298 467 aa17.49■□□□□ 0.39
VCAN-211ENST00000513984 PDE6BP35913 854 aa17.49■□□□□ 0.39
VCAN-211ENST00000513984 RRP12Q5JTH9 1297 aaKnown RBP17.49■□□□□ 0.39
VCAN-211ENST00000513984 FAM173BQ6P4H8 233 aa17.49■□□□□ 0.39
VCAN-211ENST00000513984 CTR9Q6PD62 1173 aa17.49■□□□□ 0.39
VCAN-211ENST00000513984 SCAND2PQ9GZW5 306 aaPredicted RBP17.49■□□□□ 0.39
VCAN-211ENST00000513984 DCP1AQ9NPI6 582 aaPredicted RBP17.49■□□□□ 0.39
VCAN-211ENST00000513984 DDX60LQ5H9U9 1706 aaKnown RBP17.49■□□□□ 0.39
VCAN-211ENST00000513984 GSTO1P78417 241 aa17.49■□□□□ 0.39
VCAN-211ENST00000513984 NFXL1Q6ZNB6 911 aa17.49■□□□□ 0.39
VCAN-211ENST00000513984 TTC6Q86TZ1 520 aa17.49■□□□□ 0.39
VCAN-211ENST00000513984 RAB11FIP4Q86YS3 637 aa17.49■□□□□ 0.39
VCAN-211ENST00000513984 TOMM22Q9NS69 142 aa17.49■□□□□ 0.39
VCAN-211ENST00000513984 ORC3Q9UBD5 711 aaPredicted RBP17.49■□□□□ 0.39
VCAN-211ENST00000513984 CDKL5O76039 1030 aa17.48■□□□□ 0.39
VCAN-211ENST00000513984 SBK1Q52WX2 424 aa17.48■□□□□ 0.39
VCAN-211ENST00000513984 ESR2Q92731 530 aa17.48■□□□□ 0.39
VCAN-211ENST00000513984 CCDC69A6NI79 296 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 ALDH1B1P30837 517 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 RCAN1P53805 252 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 WTAPQ15007 396 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 MICU3Q86XE3 530 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 TMTC2Q8N394 836 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 ARPP21Q9UBL0 812 aaPredicted RBP17.47■□□□□ 0.39
VCAN-211ENST00000513984 SLC12A7Q9Y666 1083 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 ERICH2A1L162 156 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 GOLGA8AA7E2F4 631 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 USP17L12C9JPN9 530 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 USP17L21D6R901 530 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 SMIM22K7EJ46 135 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 PPFIA3O75145 1194 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 CDC27P30260 824 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 PPP4CP60510 307 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 GRIK5Q16478 980 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 CPLX2Q6PUV4 134 aaKnown RBP17.47■□□□□ 0.39
VCAN-211ENST00000513984 MASTLQ96GX5 879 aa17.47■□□□□ 0.39
VCAN-211ENST00000513984 FAM217BQ9NTX9 383 aaPredicted RBP17.47■□□□□ 0.39
VCAN-211ENST00000513984 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.47■□□□□ 0.39
VCAN-211ENST00000513984 MYH1P12882 1939 aa17.46■□□□□ 0.39
VCAN-211ENST00000513984 CYP2D7A0A087X1C5 515 aa17.46■□□□□ 0.39
VCAN-211ENST00000513984 MROH7-TTC4A0A0A0MT08 1334 aa17.46■□□□□ 0.39
VCAN-211ENST00000513984 C6orf229H3BNL8 230 aa17.46■□□□□ 0.39
VCAN-211ENST00000513984 LDHCP07864 332 aa17.46■□□□□ 0.39
VCAN-211ENST00000513984 ADD1P35611 737 aaKnown RBP17.46■□□□□ 0.39
VCAN-211ENST00000513984 SEC23AQ15436 765 aa17.46■□□□□ 0.39
VCAN-211ENST00000513984 NTRK3Q16288 839 aa17.46■□□□□ 0.39
VCAN-211ENST00000513984 LRSAM1Q6UWE0 723 aa17.46■□□□□ 0.39
VCAN-211ENST00000513984 FAM205AQ6ZU69 1335 aa17.46■□□□□ 0.39
VCAN-211ENST00000513984 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
VCAN-211ENST00000513984 CAMKK2Q96RR4 588 aa17.46■□□□□ 0.39
VCAN-211ENST00000513984 MKRN1Q9UHC7 482 aaKnown RBP17.46■□□□□ 0.39
VCAN-211ENST00000513984 STK36Q9NRP7 1315 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 ORC4O43929 436 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 RXRAP19793 462 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 FOSBP53539 338 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 ATL3Q6DD88 541 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 SYNE3Q6ZMZ3 975 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 CERS3Q8IU89 383 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 STK11IPQ8N1F8 1099 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 FBXO18Q8NFZ0 1043 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 TBC1D22AQ8WUA7 517 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 LEO1Q8WVC0 666 aaPredicted RBP17.45■□□□□ 0.38
VCAN-211ENST00000513984 SPATA32Q96LK8 384 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 ZKSCAN3Q9BRR0 538 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 UBAC1Q9BSL1 405 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 ANO8Q9HCE9 1232 aaPredicted RBP17.45■□□□□ 0.38
VCAN-211ENST00000513984 TNKSO95271 1327 aa17.45■□□□□ 0.38
VCAN-211ENST00000513984 SYCE3A1L190 88 aa17.44■□□□□ 0.38
VCAN-211ENST00000513984 BAG3O95817 575 aa17.44■□□□□ 0.38
VCAN-211ENST00000513984 DIXDC1Q155Q3 683 aa17.44■□□□□ 0.38
VCAN-211ENST00000513984 SLC15A2Q16348 729 aa17.44■□□□□ 0.38
VCAN-211ENST00000513984 CCDC183Q5T5S1 534 aa17.44■□□□□ 0.38
VCAN-211ENST00000513984 MSL1Q68DK7 614 aa17.44■□□□□ 0.38
VCAN-211ENST00000513984 TFIP11Q9UBB9 837 aaKnown RBP17.44■□□□□ 0.38
VCAN-211ENST00000513984 CFAP45Q9UL16 551 aa17.44■□□□□ 0.38
VCAN-211ENST00000513984 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
VCAN-211ENST00000513984 MYL10Q9BUA6 226 aa17.44■□□□□ 0.38
VCAN-211ENST00000513984 RTFDC1Q9BY42 306 aaPredicted RBP17.44■□□□□ 0.38
VCAN-211ENST00000513984 COA1Q9GZY4 146 aa17.44■□□□□ 0.38
VCAN-211ENST00000513984 ROBO3Q96MS0 1386 aa17.43■□□□□ 0.38
VCAN-211ENST00000513984 SLC3A2P08195 630 aaKnown RBP17.43■□□□□ 0.38
VCAN-211ENST00000513984 NT5C2P49902 561 aa17.43■□□□□ 0.38
VCAN-211ENST00000513984 GUCY1B3Q02153 619 aa17.43■□□□□ 0.38
VCAN-211ENST00000513984 EZH2Q15910 746 aaKnown RBP17.43■□□□□ 0.38
VCAN-211ENST00000513984 ILDR1Q86SU0 546 aaPredicted RBP17.43■□□□□ 0.38
VCAN-211ENST00000513984 KLHL34Q8N239 644 aa17.43■□□□□ 0.38
VCAN-211ENST00000513984 MPNDQ8N594 471 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms