RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 USP5P45974 858 aa13.63□□□□□ -0.23
HTT-213ENST00000513806 PRKG1Q13976 671 aa13.63□□□□□ -0.23
HTT-213ENST00000513806 NBPF12Q5TAG4 269 aaPredicted RBP13.63□□□□□ -0.23
HTT-213ENST00000513806 SULF1Q8IWU6 871 aa13.63□□□□□ -0.23
HTT-213ENST00000513806 ZC3H15Q8WU90 426 aaKnown RBP13.63□□□□□ -0.23
HTT-213ENST00000513806 CDCA5Q96FF9 252 aa13.63□□□□□ -0.23
HTT-213ENST00000513806 STRBPQ96SI9 672 aaKnown RBP13.63□□□□□ -0.23
HTT-213ENST00000513806 DEFB129Q9H1M3 183 aa13.63□□□□□ -0.23
HTT-213ENST00000513806 SLC4A4Q9Y6R1 1079 aa13.63□□□□□ -0.23
HTT-213ENST00000513806 OTOFQ9HC10 1997 aa13.63□□□□□ -0.23
HTT-213ENST00000513806 PITPNM2Q9BZ72 1349 aa13.63□□□□□ -0.23
HTT-213ENST00000513806 SSC5DA1L4H1 1573 aa13.62□□□□□ -0.23
HTT-213ENST00000513806 CYP2D7A0A087X1C5 515 aa13.62□□□□□ -0.23
HTT-213ENST00000513806 DDTLA6NHG4 134 aaPredicted RBP13.62□□□□□ -0.23
HTT-213ENST00000513806 FAM196BA6NMK8 535 aa13.62□□□□□ -0.23
HTT-213ENST00000513806 FOXP2O15409 715 aa13.62□□□□□ -0.23
HTT-213ENST00000513806 ITGBL1O95965 494 aaPredicted RBP13.62□□□□□ -0.23
HTT-213ENST00000513806 MOB2Q70IA6 237 aa13.62□□□□□ -0.23
HTT-213ENST00000513806 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
HTT-213ENST00000513806 TEPSINQ96N21 525 aa13.62□□□□□ -0.23
HTT-213ENST00000513806 IDI2Q9BXS1 227 aa13.62□□□□□ -0.23
HTT-213ENST00000513806 EPB41L4AQ9HCS5 686 aaPredicted RBP13.62□□□□□ -0.23
HTT-213ENST00000513806 GSG1L2A8MUP6 293 aa13.61□□□□□ -0.23
HTT-213ENST00000513806 LRRFIP1Q32MZ4 808 aaKnown RBP13.61□□□□□ -0.23
HTT-213ENST00000513806 MCMDC2Q4G0Z9 681 aa13.61□□□□□ -0.23
HTT-213ENST00000513806 CDC37L1Q7L3B6 337 aa13.61□□□□□ -0.23
HTT-213ENST00000513806 STK11IPQ8N1F8 1099 aa13.61□□□□□ -0.23
HTT-213ENST00000513806 SMC1BQ8NDV3 1235 aa13.61□□□□□ -0.23
HTT-213ENST00000513806 CRNKL1Q9BZJ0 848 aaKnown RBP13.61□□□□□ -0.23
HTT-213ENST00000513806 OSBPL5Q9H0X9 879 aaPredicted RBP13.61□□□□□ -0.23
HTT-213ENST00000513806 HELLSQ9NRZ9 838 aa13.61□□□□□ -0.23
HTT-213ENST00000513806 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.61□□□□□ -0.23
HTT-213ENST00000513806 PALD1Q9ULE6 856 aa13.61□□□□□ -0.23
HTT-213ENST00000513806 ATAD5Q96QE3 1844 aa13.61□□□□□ -0.23
HTT-213ENST00000513806 IGSF3O75054 1194 aa13.6□□□□□ -0.23
HTT-213ENST00000513806 APPP05067 770 aa13.6□□□□□ -0.23
HTT-213ENST00000513806 PLCG2P16885 1265 aa13.6□□□□□ -0.23
HTT-213ENST00000513806 TNNI2P48788 182 aa13.6□□□□□ -0.23
HTT-213ENST00000513806 MIGA2Q7L4E1 593 aa13.6□□□□□ -0.23
HTT-213ENST00000513806 ZSCAN29Q8IWY8 852 aaPredicted RBP13.6□□□□□ -0.23
HTT-213ENST00000513806 FAM151AQ8WW52 585 aa13.6□□□□□ -0.23
HTT-213ENST00000513806 DCP1AQ9NPI6 582 aaPredicted RBP13.6□□□□□ -0.23
HTT-213ENST00000513806 CCDC171Q6TFL3 1326 aa13.6□□□□□ -0.23
HTT-213ENST00000513806 LAMA4Q16363 1823 aa13.6□□□□□ -0.23
HTT-213ENST00000513806 PAPPA2Q9BXP8 1791 aa13.59□□□□□ -0.23
HTT-213ENST00000513806 HIP1O00291 1037 aa13.59□□□□□ -0.23
HTT-213ENST00000513806 CDC45O75419 566 aa13.59□□□□□ -0.23
HTT-213ENST00000513806 FAM83AQ86UY5 434 aa13.59□□□□□ -0.23
HTT-213ENST00000513806 MKRN1Q9UHC7 482 aaKnown RBP13.59□□□□□ -0.23
HTT-213ENST00000513806 PASKQ96RG2 1323 aa13.59□□□□□ -0.23
HTT-213ENST00000513806 ENTPD3O75355 529 aa13.58□□□□□ -0.24
HTT-213ENST00000513806 CELF2O95319 508 aaKnown RBP13.58□□□□□ -0.24
HTT-213ENST00000513806 HSPD1P10809 573 aaKnown RBP13.58□□□□□ -0.24
HTT-213ENST00000513806 PLCD1P51178 756 aa13.58□□□□□ -0.24
HTT-213ENST00000513806 PTH1RQ03431 593 aa13.58□□□□□ -0.24
HTT-213ENST00000513806 TNFAIP1Q13829 316 aa13.58□□□□□ -0.24
HTT-213ENST00000513806 FKBP1CQ5VVH2 108 aa13.58□□□□□ -0.24
HTT-213ENST00000513806 CST9Q5W186 159 aa13.58□□□□□ -0.24
HTT-213ENST00000513806 CSRNP1Q96S65 589 aa13.58□□□□□ -0.24
HTT-213ENST00000513806 ESYT1Q9BSJ8 1104 aa13.58□□□□□ -0.24
HTT-213ENST00000513806 MCM9Q9NXL9 1143 aa13.58□□□□□ -0.24
HTT-213ENST00000513806 PATL2C9JE40 543 aaKnown RBP13.57□□□□□ -0.24
HTT-213ENST00000513806 USP17L12C9JPN9 530 aa13.57□□□□□ -0.24
HTT-213ENST00000513806 USP17L21D6R901 530 aa13.57□□□□□ -0.24
HTT-213ENST00000513806 SGSM2O43147 1006 aa13.57□□□□□ -0.24
HTT-213ENST00000513806 POLR3DP05423 398 aaPredicted RBP13.57□□□□□ -0.24
HTT-213ENST00000513806 HTRA3P83110 453 aa13.57□□□□□ -0.24
HTT-213ENST00000513806 SHROOM1Q2M3G4 852 aaPredicted RBP13.57□□□□□ -0.24
HTT-213ENST00000513806 CTR9Q6PD62 1173 aa13.57□□□□□ -0.24
HTT-213ENST00000513806 TMED8Q6PL24 325 aaPredicted RBP13.57□□□□□ -0.24
HTT-213ENST00000513806 IFNL3Q8IZI9 196 aa13.57□□□□□ -0.24
HTT-213ENST00000513806 DYNLL2Q96FJ2 89 aa13.57□□□□□ -0.24
HTT-213ENST00000513806 ATRNL1Q5VV63 1379 aa13.57□□□□□ -0.24
HTT-213ENST00000513806 MINDY4BA8MYZ0 360 aa13.56□□□□□ -0.24
HTT-213ENST00000513806 TDO2P48775 406 aa13.56□□□□□ -0.24
HTT-213ENST00000513806 HAND2P61296 217 aa13.56□□□□□ -0.24
HTT-213ENST00000513806 FSTL1Q12841 308 aa13.56□□□□□ -0.24
HTT-213ENST00000513806 TTLL12Q14166 644 aaPredicted RBP13.56□□□□□ -0.24
HTT-213ENST00000513806 SLC44A5Q8NCS7 719 aa13.56□□□□□ -0.24
HTT-213ENST00000513806 DNAJC18Q9H819 358 aa13.56□□□□□ -0.24
HTT-213ENST00000513806 INCENPQ9NQS7 918 aa13.56□□□□□ -0.24
HTT-213ENST00000513806 RPAP1Q9BWH6 1393 aaPredicted RBP13.56□□□□□ -0.24
HTT-213ENST00000513806 DOCK1Q14185 1865 aa13.55□□□□□ -0.24
HTT-213ENST00000513806 UBE2Q2LH0YL09 131 aa13.55□□□□□ -0.24
HTT-213ENST00000513806 CTDSPL2Q05D32 466 aa13.55□□□□□ -0.24
HTT-213ENST00000513806 RRP1BQ14684 758 aaKnown RBP13.55□□□□□ -0.24
HTT-213ENST00000513806 RUFY2Q8WXA3 655 aa13.55□□□□□ -0.24
HTT-213ENST00000513806 NAPBQ9H115 298 aa13.55□□□□□ -0.24
HTT-213ENST00000513806 ATP8A2Q9NTI2 1148 aa13.55□□□□□ -0.24
HTT-213ENST00000513806 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.55□□□□□ -0.24
HTT-213ENST00000513806 ANGEL1Q9UNK9 670 aaKnown RBP13.55□□□□□ -0.24
HTT-213ENST00000513806 PPP2R3BQ9Y5P8 575 aa13.55□□□□□ -0.24
HTT-213ENST00000513806 TACC3Q9Y6A5 838 aa13.55□□□□□ -0.24
HTT-213ENST00000513806 COL2A1P02458 1487 aaPredicted RBP13.55□□□□□ -0.24
HTT-213ENST00000513806 USP2O75604 605 aaPredicted RBP13.54□□□□□ -0.24
HTT-213ENST00000513806 NPM3O75607 178 aaKnown RBP13.54□□□□□ -0.24
HTT-213ENST00000513806 FGAP02671 866 aa13.54□□□□□ -0.24
HTT-213ENST00000513806 GNAT2P19087 354 aa13.54□□□□□ -0.24
HTT-213ENST00000513806 C12orf60Q5U649 245 aa13.54□□□□□ -0.24
HTT-213ENST00000513806 TICAM2Q86XR7 235 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms