RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 MAP3K10Q02779 954 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 MECOMQ03112 1051 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 NFIAQ12857 509 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 KIF22Q14807 665 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 TAF1CQ15572 869 aaPredicted RBP8.96□□□□□ -0.98
HTT-212ENST00000513639 HSP90AB4PQ58FF6 505 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 ERC1Q8IUD2 1116 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 PICK1Q9NRD5 415 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 TNNQ9UQP3 1299 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 TRIM17Q9Y577 477 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 SNCAIPQ9Y6H5 919 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 GAKO14976 1311 aa8.96□□□□□ -0.98
HTT-212ENST00000513639 ZNF646O15015 1829 aaPredicted RBP8.96□□□□□ -0.98
HTT-212ENST00000513639 TBC1D12O60347 775 aa8.95□□□□□ -0.98
HTT-212ENST00000513639 TLR2O60603 784 aa8.95□□□□□ -0.98
HTT-212ENST00000513639 CTNND1O60716 968 aaKnown RBP8.95□□□□□ -0.98
HTT-212ENST00000513639 GNRH1P01148 92 aa8.95□□□□□ -0.98
HTT-212ENST00000513639 BTDP43251 543 aa8.95□□□□□ -0.98
HTT-212ENST00000513639 TTC39AQ5SRH9 613 aa8.95□□□□□ -0.98
HTT-212ENST00000513639 NOL9Q5SY16 702 aaKnown RBP8.95□□□□□ -0.98
HTT-212ENST00000513639 TMED8Q6PL24 325 aaPredicted RBP8.95□□□□□ -0.98
HTT-212ENST00000513639 FASTKD5Q7L8L6 764 aaKnown RBP8.95□□□□□ -0.98
HTT-212ENST00000513639 OTOP1Q7RTM1 612 aa8.95□□□□□ -0.98
HTT-212ENST00000513639 NBPF11Q86T75 865 aa8.95□□□□□ -0.98
HTT-212ENST00000513639 ZFPM1Q8IX07 1006 aa8.95□□□□□ -0.98
HTT-212ENST00000513639 NSUN4Q96CB9 384 aaKnown RBP8.95□□□□□ -0.98
HTT-212ENST00000513639 ZNF512BQ96KM6 892 aaPredicted RBP8.95□□□□□ -0.98
HTT-212ENST00000513639 MROH7-TTC4A0A0A0MT08 1334 aa8.95□□□□□ -0.98
HTT-212ENST00000513639 PHF20L1A8MW92 1017 aa8.94□□□□□ -0.98
HTT-212ENST00000513639 BTBD19C9JJ37 291 aa8.94□□□□□ -0.98
HTT-212ENST00000513639 INPP5BP32019 993 aa8.94□□□□□ -0.98
HTT-212ENST00000513639 TNNI3KQ59H18 835 aa8.94□□□□□ -0.98
HTT-212ENST00000513639 TBC1D9Q6ZT07 1266 aa8.94□□□□□ -0.98
HTT-212ENST00000513639 ANKRD23Q86SG2 305 aa8.94□□□□□ -0.98
HTT-212ENST00000513639 RPAP2Q8IXW5 612 aaPredicted RBP8.94□□□□□ -0.98
HTT-212ENST00000513639 FAM43AQ8N2R8 423 aa8.94□□□□□ -0.98
HTT-212ENST00000513639 KCNH4Q9UQ05 1017 aa8.94□□□□□ -0.98
HTT-212ENST00000513639 PTPN22Q9Y2R2 807 aa8.94□□□□□ -0.98
HTT-212ENST00000513639 ZHX2Q9Y6X8 837 aa8.94□□□□□ -0.98
HTT-212ENST00000513639 FPGT-TNNI3KV9GXZ4 949 aa8.94□□□□□ -0.98
HTT-212ENST00000513639 HMMRO75330 724 aa8.93□□□□□ -0.98
HTT-212ENST00000513639 RLBP1P12271 317 aa8.93□□□□□ -0.98
HTT-212ENST00000513639 HOXD10P28358 340 aa8.93□□□□□ -0.98
HTT-212ENST00000513639 MCAMP43121 646 aa8.93□□□□□ -0.98
HTT-212ENST00000513639 VASPP50552 380 aaPredicted RBP8.93□□□□□ -0.98
HTT-212ENST00000513639 PRMT2P55345 433 aa8.93□□□□□ -0.98
HTT-212ENST00000513639 PPP4CP60510 307 aa8.93□□□□□ -0.98
HTT-212ENST00000513639 PICALMQ13492 652 aa8.93□□□□□ -0.98
HTT-212ENST00000513639 NAA16Q6N069 864 aaPredicted RBP8.93□□□□□ -0.98
HTT-212ENST00000513639 CERS3Q8IU89 383 aa8.93□□□□□ -0.98
HTT-212ENST00000513639 SCYL3Q8IZE3 742 aa8.93□□□□□ -0.98
HTT-212ENST00000513639 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.93□□□□□ -0.98
HTT-212ENST00000513639 CD99L2Q8TCZ2 262 aa8.93□□□□□ -0.98
HTT-212ENST00000513639 DHX36Q9H2U1 1008 aaKnown RBP8.93□□□□□ -0.98
HTT-212ENST00000513639 PI4KBQ9UBF8 816 aa8.93□□□□□ -0.98
HTT-212ENST00000513639 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.93□□□□□ -0.98
HTT-212ENST00000513639 A0A1B0GUL6 1792 aa8.93□□□□□ -0.98
HTT-212ENST00000513639 ECM29Q5VYK3 1845 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 DDTLA6NHG4 134 aaPredicted RBP8.92□□□□□ -0.98
HTT-212ENST00000513639 PDHXO00330 501 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 PTPRAP18433 802 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 SOX10P56693 466 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 RHBDL3P58872 404 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 CEP85Q6P2H3 762 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 SH3BP5LQ7L8J4 393 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 FOXP4Q8IVH2 680 aaPredicted RBP8.92□□□□□ -0.98
HTT-212ENST00000513639 TEX11Q8IYF3 940 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 PANK1Q8TE04 598 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 DBNDD2Q9BQY9 259 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 TBC1D2Q9BYX2 928 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 C1orf115Q9H7X2 142 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.92□□□□□ -0.98
HTT-212ENST00000513639 SNRKQ9NRH2 765 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 DDX19BQ9UMR2 479 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 AFG3L2Q9Y4W6 797 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 PDE4DIPQ5VU43 2346 aa8.92□□□□□ -0.98
HTT-212ENST00000513639 CYP2E1P05181 493 aaPredicted RBP8.91□□□□□ -0.98
HTT-212ENST00000513639 LACTBP83111 547 aaPredicted RBP8.91□□□□□ -0.98
HTT-212ENST00000513639 MAP3K12Q12852 859 aa8.91□□□□□ -0.98
HTT-212ENST00000513639 C17orf99Q6UX52 265 aa8.91□□□□□ -0.98
HTT-212ENST00000513639 PI16Q6UXB8 463 aa8.91□□□□□ -0.98
HTT-212ENST00000513639 CLASRPQ8N2M8 674 aaKnown RBP8.91□□□□□ -0.98
HTT-212ENST00000513639 ZNF384Q8TF68 577 aa8.91□□□□□ -0.98
HTT-212ENST00000513639 EAF2Q96CJ1 260 aaPredicted RBP8.91□□□□□ -0.98
HTT-212ENST00000513639 PARK7Q99497 189 aaKnown RBP8.91□□□□□ -0.98
HTT-212ENST00000513639 TMEM106CQ9BVX2 250 aa8.91□□□□□ -0.98
HTT-212ENST00000513639 TRIM34Q9BYJ4 488 aa8.91□□□□□ -0.98
HTT-212ENST00000513639 CCDC8Q9H0W5 538 aaPredicted RBP8.91□□□□□ -0.98
HTT-212ENST00000513639 OSBPL5Q9H0X9 879 aaPredicted RBP8.91□□□□□ -0.98
HTT-212ENST00000513639 DDX4Q9NQI0 724 aaKnown RBP8.91□□□□□ -0.98
HTT-212ENST00000513639 HERC5Q9UII4 1024 aaKnown RBP8.91□□□□□ -0.98
HTT-212ENST00000513639 RCAN3Q9UKA8 241 aa8.91□□□□□ -0.98
HTT-212ENST00000513639 SLC45A1Q9Y2W3 748 aa8.91□□□□□ -0.98
HTT-212ENST00000513639 A0A0G2JLL6 359 aaPredicted RBP8.9□□□□□ -0.98
HTT-212ENST00000513639 RAB11FIP3O75154 756 aa8.9□□□□□ -0.98
HTT-212ENST00000513639 PABPC4Q13310 644 aaKnown RBP eCLIP8.9□□□□□ -0.98
HTT-212ENST00000513639 TTF1Q15361 905 aaPredicted RBP8.9□□□□□ -0.98
HTT-212ENST00000513639 SLC9C1Q4G0N8 1177 aa8.9□□□□□ -0.98
HTT-212ENST00000513639 PRRT2Q7Z6L0 340 aaPredicted RBP8.9□□□□□ -0.98
HTT-212ENST00000513639 SH3RF3Q8TEJ3 882 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms