RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	POTEI	P0CG38	1075 aa		18.83	■□□□□ 0.6
SH3TC1-223	ENST00000513495	POTEJ	P0CG39	1038 aa		18.83	■□□□□ 0.6
SH3TC1-223	ENST00000513495	NF2	P35240	595 aa		18.83	■□□□□ 0.6
SH3TC1-223	ENST00000513495	NFIA	Q12857	509 aa		18.83	■□□□□ 0.6
SH3TC1-223	ENST00000513495	RASA3	Q14644	834 aa		18.83	■□□□□ 0.6
SH3TC1-223	ENST00000513495	MAP1S	Q66K74	1059 aa	Predicted RBP	18.83	■□□□□ 0.6
SH3TC1-223	ENST00000513495	GIMAP6	Q6P9H5	292 aa		18.83	■□□□□ 0.6
SH3TC1-223	ENST00000513495	CCDC129	Q6ZRS4	1044 aa		18.83	■□□□□ 0.6
SH3TC1-223	ENST00000513495	FOCAD	Q5VW36	1801 aa		18.82	■□□□□ 0.6
SH3TC1-223	ENST00000513495	PATL2	C9JE40	543 aa	Known RBP	18.82	■□□□□ 0.6
SH3TC1-223	ENST00000513495	HLA-DOA	P06340	250 aa		18.82	■□□□□ 0.6
SH3TC1-223	ENST00000513495	TDO2	P48775	406 aa		18.82	■□□□□ 0.6
SH3TC1-223	ENST00000513495	USP48	Q86UV5	1035 aa		18.82	■□□□□ 0.6
SH3TC1-223	ENST00000513495	RBM46	Q8TBY0	533 aa	Known RBP	18.82	■□□□□ 0.6
SH3TC1-223	ENST00000513495	SDR42E1	Q8WUS8	393 aa		18.82	■□□□□ 0.6
SH3TC1-223	ENST00000513495	ESYT1	Q9BSJ8	1104 aa		18.82	■□□□□ 0.6
SH3TC1-223	ENST00000513495	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.82	■□□□□ 0.6
SH3TC1-223	ENST00000513495	DHX36	Q9H2U1	1008 aa	Known RBP	18.82	■□□□□ 0.6
SH3TC1-223	ENST00000513495	MCM9	Q9NXL9	1143 aa		18.82	■□□□□ 0.6
SH3TC1-223	ENST00000513495	POLR2A	P24928	1970 aa	Known RBP	18.82	■□□□□ 0.6
SH3TC1-223	ENST00000513495	CDK5RAP2	Q96SN8	1893 aa		18.82	■□□□□ 0.6
SH3TC1-223	ENST00000513495	SGSM2	O43147	1006 aa		18.81	■□□□□ 0.6
SH3TC1-223	ENST00000513495	PRKAB2	O43741	272 aa		18.81	■□□□□ 0.6
SH3TC1-223	ENST00000513495	SUPT20HL1	Q3ZLR7	823 aa		18.81	■□□□□ 0.6
SH3TC1-223	ENST00000513495	TTC6	Q86TZ1	520 aa		18.81	■□□□□ 0.6
SH3TC1-223	ENST00000513495	TRIM34	Q9BYJ4	488 aa		18.81	■□□□□ 0.6
SH3TC1-223	ENST00000513495	NAPB	Q9H115	298 aa		18.81	■□□□□ 0.6
SH3TC1-223	ENST00000513495	FAM198A	Q9UFP1	575 aa		18.81	■□□□□ 0.6
SH3TC1-223	ENST00000513495	NAV1	Q8NEY1	1877 aa		18.81	■□□□□ 0.6
SH3TC1-223	ENST00000513495	COL2A1	P02458	1487 aa	Predicted RBP	18.8	■□□□□ 0.6
SH3TC1-223	ENST00000513495	ADM5	C9JUS6	153 aa		18.8	■□□□□ 0.6
SH3TC1-223	ENST00000513495	POLR3D	P05423	398 aa	Predicted RBP	18.8	■□□□□ 0.6
SH3TC1-223	ENST00000513495	ZNF589	Q86UQ0	364 aa	Predicted RBP	18.8	■□□□□ 0.6
SH3TC1-223	ENST00000513495	GLIS2	Q9BZE0	524 aa	Predicted RBP	18.8	■□□□□ 0.6
SH3TC1-223	ENST00000513495	DCP1A	Q9NPI6	582 aa	Predicted RBP	18.8	■□□□□ 0.6
SH3TC1-223	ENST00000513495	DDX4	Q9NQI0	724 aa	Known RBP	18.8	■□□□□ 0.6
SH3TC1-223	ENST00000513495	ARPP21	Q9UBL0	812 aa	Predicted RBP	18.8	■□□□□ 0.6
SH3TC1-223	ENST00000513495	CNTNAP1	P78357	1384 aa		18.8	■□□□□ 0.6
SH3TC1-223	ENST00000513495	MYH1	P12882	1939 aa		18.79	■□□□□ 0.6
SH3TC1-223	ENST00000513495	GSG1L2	A8MUP6	293 aa		18.79	■□□□□ 0.6
SH3TC1-223	ENST00000513495	REC8	O95072	547 aa		18.79	■□□□□ 0.6
SH3TC1-223	ENST00000513495	FSTL1	Q12841	308 aa		18.79	■□□□□ 0.6
SH3TC1-223	ENST00000513495	IFNL3	Q8IZI9	196 aa		18.79	■□□□□ 0.6
SH3TC1-223	ENST00000513495	CSRNP1	Q96S65	589 aa		18.79	■□□□□ 0.6
SH3TC1-223	ENST00000513495	DSCC1	Q9BVC3	393 aa		18.79	■□□□□ 0.6
SH3TC1-223	ENST00000513495	TMEM39B	Q9GZU3	492 aa		18.79	■□□□□ 0.6
SH3TC1-223	ENST00000513495	SAP30BP	Q9UHR5	308 aa	Known RBP	18.79	■□□□□ 0.6
SH3TC1-223	ENST00000513495	CTNNA3	Q9UI47	895 aa		18.79	■□□□□ 0.6
SH3TC1-223	ENST00000513495	HSPD1	P10809	573 aa	Known RBP	18.78	■□□□□ 0.6
SH3TC1-223	ENST00000513495	DCAF15	Q66K64	600 aa		18.78	■□□□□ 0.6
SH3TC1-223	ENST00000513495	CDCA5	Q96FF9	252 aa		18.78	■□□□□ 0.6
SH3TC1-223	ENST00000513495	ANO2	Q9NQ90	1003 aa		18.78	■□□□□ 0.6
SH3TC1-223	ENST00000513495	PI4KB	Q9UBF8	816 aa		18.78	■□□□□ 0.6
SH3TC1-223	ENST00000513495	SCAF8	Q9UPN6	1271 aa	Known RBP	18.78	■□□□□ 0.6
SH3TC1-223	ENST00000513495	ATRNL1	Q5VV63	1379 aa		18.78	■□□□□ 0.6
SH3TC1-223	ENST00000513495	SLC3A2	P08195	630 aa	Known RBP	18.77	■□□□□ 0.6
SH3TC1-223	ENST00000513495	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	18.77	■□□□□ 0.6
SH3TC1-223	ENST00000513495	TAOK2	Q9UL54	1235 aa		18.77	■□□□□ 0.6
SH3TC1-223	ENST00000513495	PALD1	Q9ULE6	856 aa		18.77	■□□□□ 0.6
SH3TC1-223	ENST00000513495	ZMYM6	O95789	1325 aa		18.76	■□□□□ 0.59
SH3TC1-223	ENST00000513495	PPP1R12B	O60237	982 aa	Predicted RBP	18.76	■□□□□ 0.59
SH3TC1-223	ENST00000513495	ALX1	Q15699	326 aa		18.76	■□□□□ 0.59
SH3TC1-223	ENST00000513495	VPS53	Q5VIR6	699 aa		18.76	■□□□□ 0.59
SH3TC1-223	ENST00000513495	FOXP4	Q8IVH2	680 aa	Predicted RBP	18.76	■□□□□ 0.59
SH3TC1-223	ENST00000513495	MKRN1	Q9UHC7	482 aa	Known RBP	18.76	■□□□□ 0.59
SH3TC1-223	ENST00000513495		U3KPZ7	1027 aa	Predicted RBP	18.76	■□□□□ 0.59
SH3TC1-223	ENST00000513495	BAZ2A	Q9UIF9	1905 aa	Known RBP	18.75	■□□□□ 0.59
SH3TC1-223	ENST00000513495	MINDY4B	A8MYZ0	360 aa		18.75	■□□□□ 0.59
SH3TC1-223	ENST00000513495	USP17L12	C9JPN9	530 aa		18.75	■□□□□ 0.59
SH3TC1-223	ENST00000513495	USP17L21	D6R901	530 aa		18.75	■□□□□ 0.59
SH3TC1-223	ENST00000513495	SBK1	Q52WX2	424 aa		18.75	■□□□□ 0.59
SH3TC1-223	ENST00000513495	ZFPM1	Q8IX07	1006 aa		18.75	■□□□□ 0.59
SH3TC1-223	ENST00000513495	ZNF408	Q9H9D4	720 aa		18.75	■□□□□ 0.59
SH3TC1-223	ENST00000513495	ZNF287	Q9HBT7	754 aa		18.75	■□□□□ 0.59
SH3TC1-223	ENST00000513495	HERC5	Q9UII4	1024 aa	Known RBP	18.75	■□□□□ 0.59
SH3TC1-223	ENST00000513495	DDTL	A6NHG4	134 aa	Predicted RBP	18.74	■□□□□ 0.59
SH3TC1-223	ENST00000513495	TRAF5	O00463	557 aa		18.74	■□□□□ 0.59
SH3TC1-223	ENST00000513495	TTLL12	Q14166	644 aa	Predicted RBP	18.74	■□□□□ 0.59
SH3TC1-223	ENST00000513495	SLC4A8	Q2Y0W8	1093 aa		18.74	■□□□□ 0.59
SH3TC1-223	ENST00000513495	NBPF12	Q5TAG4	269 aa	Predicted RBP	18.74	■□□□□ 0.59
SH3TC1-223	ENST00000513495	PRAMEF18	Q5VWM3	479 aa		18.74	■□□□□ 0.59
SH3TC1-223	ENST00000513495	CTR9	Q6PD62	1173 aa		18.74	■□□□□ 0.59
SH3TC1-223	ENST00000513495	TEPSIN	Q96N21	525 aa		18.74	■□□□□ 0.59
SH3TC1-223	ENST00000513495	EHD4	Q9H223	541 aa		18.74	■□□□□ 0.59
SH3TC1-223	ENST00000513495	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	18.74	■□□□□ 0.59
SH3TC1-223	ENST00000513495	SERPINB13	Q9UIV8	391 aa		18.74	■□□□□ 0.59
SH3TC1-223	ENST00000513495	ITGBL1	O95965	494 aa	Predicted RBP	18.73	■□□□□ 0.59
SH3TC1-223	ENST00000513495	FGA	P02671	866 aa		18.73	■□□□□ 0.59
SH3TC1-223	ENST00000513495	IMMT	Q16891	758 aa	Known RBP	18.73	■□□□□ 0.59
SH3TC1-223	ENST00000513495	C12orf60	Q5U649	245 aa		18.73	■□□□□ 0.59
SH3TC1-223	ENST00000513495	IL25	Q9H293	177 aa		18.73	■□□□□ 0.59
SH3TC1-223	ENST00000513495	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	18.73	■□□□□ 0.59	6e-7	■■■■■ 29.2
SH3TC1-223	ENST00000513495	DDX60L	Q5H9U9	1706 aa	Known RBP	18.72	■□□□□ 0.59
SH3TC1-223	ENST00000513495	ZNF213	O14771	459 aa		18.72	■□□□□ 0.59
SH3TC1-223	ENST00000513495	CELF2	O95319	508 aa	Known RBP	18.72	■□□□□ 0.59
SH3TC1-223	ENST00000513495	FKBP1B	P68106	108 aa		18.72	■□□□□ 0.59
SH3TC1-223	ENST00000513495	PPARA	Q07869	468 aa		18.72	■□□□□ 0.59
SH3TC1-223	ENST00000513495	RNF20	Q5VTR2	975 aa		18.72	■□□□□ 0.59
SH3TC1-223	ENST00000513495	SH3BP5L	Q7L8J4	393 aa		18.72	■□□□□ 0.59
SH3TC1-223	ENST00000513495	ARMC9	Q7Z3E5	817 aa		18.72	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms