RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 NPM2Q86SE8 214 aaKnown RBP9.1□□□□□ -0.95
RFC1-215ENST00000512881 SLC9A9Q8IVB4 645 aa9.1□□□□□ -0.95
RFC1-215ENST00000512881 TMEM151AQ8N4L1 468 aa9.1□□□□□ -0.95
RFC1-215ENST00000512881 TPCN2Q8NHX9 752 aa9.1□□□□□ -0.95
RFC1-215ENST00000512881 ZCCHC2Q9C0B9 1178 aaKnown RBP9.1□□□□□ -0.95
RFC1-215ENST00000512881 USP16Q9Y5T5 823 aa9.1□□□□□ -0.95
RFC1-215ENST00000512881 COL5A3P25940 1745 aaPredicted RBP9.1□□□□□ -0.95
RFC1-215ENST00000512881 SCN11AQ9UI33 1791 aa9.09□□□□□ -0.95
RFC1-215ENST00000512881 C4AP0C0L4 1744 aa9.09□□□□□ -0.95
RFC1-215ENST00000512881 A0A1W2PNR3 127 aa9.09□□□□□ -0.95
RFC1-215ENST00000512881 PRAMEF22A3QJZ6 481 aa9.09□□□□□ -0.95
RFC1-215ENST00000512881 NEFMP07197 916 aa9.09□□□□□ -0.95
RFC1-215ENST00000512881 SNRPA1P09661 255 aaKnown RBP9.09□□□□□ -0.95
RFC1-215ENST00000512881 TXLNAP40222 546 aa9.09□□□□□ -0.95
RFC1-215ENST00000512881 ATP1A2P50993 1020 aa9.09□□□□□ -0.95
RFC1-215ENST00000512881 C9orf131Q5VYM1 1079 aa9.09□□□□□ -0.95
RFC1-215ENST00000512881 TBC1D9BQ66K14 1250 aa9.09□□□□□ -0.95
RFC1-215ENST00000512881 C1orf229Q6ZS94 237 aaPredicted RBP9.09□□□□□ -0.95
RFC1-215ENST00000512881 C2CD5Q86YS7 1000 aa9.09□□□□□ -0.95
RFC1-215ENST00000512881 KCTD17Q8N5Z5 321 aa9.09□□□□□ -0.95
RFC1-215ENST00000512881 MIS18AQ9NYP9 233 aa9.09□□□□□ -0.95
RFC1-215ENST00000512881 PCDHGC4Q9Y5F7 938 aa9.09□□□□□ -0.95
RFC1-215ENST00000512881 TJP1Q07157 1748 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 ADAMTS7Q9UKP4 1686 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 SHISA8B8ZZ34 492 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 H0YIN7 160 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 CAMTA2O94983 1202 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 CTBSQ01459 385 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 TBCELQ5QJ74 424 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 CCDC102BQ68D86 513 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 TNS4Q8IZW8 715 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 SIX5Q8N196 739 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 OGFOD1Q8N543 542 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 PLEKHF1Q96S99 279 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 ZIC5Q96T25 663 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 SETDB2Q96T68 719 aa9.08□□□□□ -0.96
RFC1-215ENST00000512881 DCDC2BA2VCK2 349 aa9.07□□□□□ -0.96
RFC1-215ENST00000512881 ATXN7O15265 892 aaPredicted RBP9.07□□□□□ -0.96
RFC1-215ENST00000512881 DKK1O94907 266 aa9.07□□□□□ -0.96
RFC1-215ENST00000512881 BMP4P12644 408 aa9.07□□□□□ -0.96
RFC1-215ENST00000512881 PIP4K2AP48426 406 aaPredicted RBP9.07□□□□□ -0.96
RFC1-215ENST00000512881 TEAD4Q15561 434 aa9.07□□□□□ -0.96
RFC1-215ENST00000512881 NFE2L2Q16236 605 aa9.07□□□□□ -0.96
RFC1-215ENST00000512881 ARSJQ5FYB0 599 aaPredicted RBP9.07□□□□□ -0.96
RFC1-215ENST00000512881 KANK3Q6NY19 840 aa9.07□□□□□ -0.96
RFC1-215ENST00000512881 TTLL6Q8N841 843 aa9.07□□□□□ -0.96
RFC1-215ENST00000512881 NEDD1Q8NHV4 660 aa9.07□□□□□ -0.96
RFC1-215ENST00000512881 BRIP1Q9BX63 1249 aa9.07□□□□□ -0.96
RFC1-215ENST00000512881 PNNQ9H307 717 aaKnown RBP9.07□□□□□ -0.96
RFC1-215ENST00000512881 MKRN1Q9UHC7 482 aaKnown RBP9.07□□□□□ -0.96
RFC1-215ENST00000512881 GDF2Q9UK05 429 aaPredicted RBP9.07□□□□□ -0.96
RFC1-215ENST00000512881 MAFBQ9Y5Q3 323 aaPredicted RBP9.07□□□□□ -0.96
RFC1-215ENST00000512881 CNTNAP5Q8WYK1 1306 aa9.06□□□□□ -0.96
RFC1-215ENST00000512881 A6NJR5 290 aa9.06□□□□□ -0.96
RFC1-215ENST00000512881 PDE6BP35913 854 aa9.06□□□□□ -0.96
RFC1-215ENST00000512881 DDX10Q13206 875 aaKnown RBP9.06□□□□□ -0.96
RFC1-215ENST00000512881 RALBP1Q15311 655 aa9.06□□□□□ -0.96
RFC1-215ENST00000512881 SH3PXD2AQ5TCZ1 1133 aa9.06□□□□□ -0.96
RFC1-215ENST00000512881 PRR5LQ6MZQ0 368 aa9.06□□□□□ -0.96
RFC1-215ENST00000512881 SLCO4C1Q6ZQN7 724 aa9.06□□□□□ -0.96
RFC1-215ENST00000512881 LARGE2Q8N3Y3 721 aa9.06□□□□□ -0.96
RFC1-215ENST00000512881 GOLGA6L1Q8N7Z2 621 aa9.06□□□□□ -0.96
RFC1-215ENST00000512881 PNISRQ8TF01 805 aaKnown RBP9.06□□□□□ -0.96
RFC1-215ENST00000512881 RNF181Q9P0P0 153 aa9.06□□□□□ -0.96
RFC1-215ENST00000512881 EML1O00423 815 aa9.05□□□□□ -0.96
RFC1-215ENST00000512881 FAM157BP0CG42 384 aa9.05□□□□□ -0.96
RFC1-215ENST00000512881 MAPTP10636 758 aaKnown RBP9.05□□□□□ -0.96
RFC1-215ENST00000512881 TNP2Q05952 138 aa9.05□□□□□ -0.96
RFC1-215ENST00000512881 SAMD5Q5TGI4 173 aa9.05□□□□□ -0.96
RFC1-215ENST00000512881 CLEC4GQ6UXB4 293 aa9.05□□□□□ -0.96
RFC1-215ENST00000512881 CNBD1Q8NA66 436 aa9.05□□□□□ -0.96
RFC1-215ENST00000512881 ZNF622Q969S3 477 aaKnown RBP eCLIP9.05□□□□□ -0.961e-9■□□□□ 9.6
RFC1-215ENST00000512881 ZNF594Q96JF6 807 aaPredicted RBP9.05□□□□□ -0.96
RFC1-215ENST00000512881 THUMPD2Q9BTF0 503 aaKnown RBP9.05□□□□□ -0.96
RFC1-215ENST00000512881 NMRK2Q9NPI5 230 aa9.05□□□□□ -0.96
RFC1-215ENST00000512881 DNMT3AQ9Y6K1 912 aaPredicted RBP9.05□□□□□ -0.96
RFC1-215ENST00000512881 CARMIL3Q8ND23 1372 aa9.04□□□□□ -0.96
RFC1-215ENST00000512881 KIF13BQ9NQT8 1826 aa9.04□□□□□ -0.96
RFC1-215ENST00000512881 PALM3A6NDB9 673 aaPredicted RBP9.04□□□□□ -0.96
RFC1-215ENST00000512881 M0R2N6 131 aa9.04□□□□□ -0.96
RFC1-215ENST00000512881 NPHP1O15259 732 aa9.04□□□□□ -0.96
RFC1-215ENST00000512881 HSPA6P17066 643 aa9.04□□□□□ -0.96
RFC1-215ENST00000512881 CD33P20138 364 aa9.04□□□□□ -0.96
RFC1-215ENST00000512881 NOS2P35228 1153 aa9.04□□□□□ -0.96
RFC1-215ENST00000512881 EIF4A1P60842 406 aaKnown RBP9.04□□□□□ -0.96
RFC1-215ENST00000512881 TSPAN10Q9H1Z9 355 aaPredicted RBP9.04□□□□□ -0.96
RFC1-215ENST00000512881 TFIP11Q9UBB9 837 aaKnown RBP9.04□□□□□ -0.96
RFC1-215ENST00000512881 GGA1Q9UJY5 639 aa9.04□□□□□ -0.96
RFC1-215ENST00000512881 ZNF652Q9Y2D9 606 aa9.04□□□□□ -0.96
RFC1-215ENST00000512881 MAPK8IP3Q9UPT6 1336 aa9.04□□□□□ -0.96
RFC1-215ENST00000512881 KIAA1551Q9HCM1 1747 aa9.03□□□□□ -0.96
RFC1-215ENST00000512881 EFSO43281 561 aa9.03□□□□□ -0.96
RFC1-215ENST00000512881 TOMM70O94826 608 aa9.03□□□□□ -0.96
RFC1-215ENST00000512881 LMNB1P20700 586 aa9.03□□□□□ -0.96
RFC1-215ENST00000512881 PRELPP51888 382 aa9.03□□□□□ -0.96
RFC1-215ENST00000512881 RIPK4P57078 832 aa9.03□□□□□ -0.96
RFC1-215ENST00000512881 SNRPNP63162 240 aaKnown RBP9.03□□□□□ -0.96
RFC1-215ENST00000512881 ST5P78524 1137 aa9.03□□□□□ -0.96
RFC1-215ENST00000512881 NBPF5PQ86XG9 351 aaPredicted RBP9.03□□□□□ -0.96
RFC1-215ENST00000512881 NGEFQ8N5V2 710 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms