RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-208ENST00000512064 DNAJC25Q9H1X3 360 aa4.73□□□□□ -1.65
GYPA-208ENST00000512064 C11orf16Q9NQ32 467 aa4.73□□□□□ -1.65
GYPA-208ENST00000512064 EXOC1Q9NV70 894 aa4.73□□□□□ -1.65
GYPA-208ENST00000512064 CHMP5Q9NZZ3 219 aa4.73□□□□□ -1.65
GYPA-208ENST00000512064 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.73□□□□□ -1.65
GYPA-208ENST00000512064 MYO6Q9UM54 1294 aa4.73□□□□□ -1.65
GYPA-208ENST00000512064 TGFBR3LH3BV60 316 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 ZBTB39O15060 712 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 CEP104O60308 925 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 TPPPO94811 219 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 KIAA0754O94854 1291 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 RPL17P18621 184 aaKnown RBP4.72□□□□□ -1.65
GYPA-208ENST00000512064 MCM4P33991 863 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 EIF5P55010 431 aaKnown RBP4.72□□□□□ -1.65
GYPA-208ENST00000512064 HNRNPUQ00839 825 aaKnown RBP eCLIP4.72□□□□□ -1.65
GYPA-208ENST00000512064 XPCQ01831 940 aaPredicted RBP4.72□□□□□ -1.65
GYPA-208ENST00000512064 TAGLNQ01995 201 aaKnown RBP4.72□□□□□ -1.65
GYPA-208ENST00000512064 DGKZQ13574 1117 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 TRIM29Q14134 588 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 CCDC144BQ3MJ40 725 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 CCDC38Q502W7 563 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 GNASQ5JWF2 1037 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 CEP135Q66GS9 1140 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 CLEC4GQ6UXB4 293 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 MMS22LQ6ZRQ5 1243 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 CEP57Q86XR8 500 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 LRRC49Q8IUZ0 686 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 CCDC144CPQ8IYA2 1237 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 ANKRD24Q8TF21 1146 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 C7orf43Q8WVR3 580 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 JAKMIP2Q96AA8 810 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 IFT43Q96FT9 208 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 DCAF5Q96JK2 942 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 NAP1L4Q99733 375 aaKnown RBP4.72□□□□□ -1.65
GYPA-208ENST00000512064 MMTAG2Q9BU76 263 aaKnown RBP4.72□□□□□ -1.65
GYPA-208ENST00000512064 C22orf23Q9BZE7 217 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 PHACTR1Q9C0D0 580 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 TIMMDC1Q9NPL8 285 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 LUC7LQ9NQ29 371 aaKnown RBP4.72□□□□□ -1.65
GYPA-208ENST00000512064 BATF3Q9NR55 127 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 ENAMQ9NRM1 1142 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 ZNHIT6Q9NWK9 470 aaKnown RBP4.72□□□□□ -1.65
GYPA-208ENST00000512064 CUEDC1Q9NWM3 386 aaPredicted RBP4.72□□□□□ -1.65
GYPA-208ENST00000512064 CABP1Q9NZU7 370 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 ZNF232Q9UNY5 417 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 ATP8A1Q9Y2Q0 1164 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 SUGT1Q9Y2Z0 365 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 KDRP35968 1356 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 ZMYM3Q14202 1370 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 SMARCA2P51531 1590 aa4.72□□□□□ -1.65
GYPA-208ENST00000512064 KRTAP4-8A0A0G2JLE6 195 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.71□□□□□ -1.66
GYPA-208ENST00000512064 SORBS3O60504 671 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 RLBP1P12271 317 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 GNA15P30679 374 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 CYP2C19P33261 490 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 MAN1A1P33908 653 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 RHBDL3P58872 404 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 MAP3K10Q02779 954 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 PSMD2Q13200 908 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 NEDD9Q14511 834 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 NOLC1Q14978 699 aaKnown RBP eCLIP4.71□□□□□ -1.66
GYPA-208ENST00000512064 SLMAPQ14BN4 828 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 TSNAXIP1Q2TAA8 658 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 LDLRAD1Q5T700 205 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 C16orf87Q6PH81 154 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 CCDC174Q6PII3 467 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 XKR5Q6UX68 686 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 MICALCLQ6ZW33 695 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 LMNTD2Q8IXW0 634 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 TEX11Q8IYF3 940 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 DRAXINQ8NBI3 349 aaPredicted RBP4.71□□□□□ -1.66
GYPA-208ENST00000512064 RNF214Q8ND24 703 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 ATL2Q8NHH9 583 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 GOLGA5Q8TBA6 731 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 WHAMMQ8TF30 809 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 SREK1Q8WXA9 508 aaKnown RBP4.71□□□□□ -1.66
GYPA-208ENST00000512064 CCDC47Q96A33 483 aaKnown RBP4.71□□□□□ -1.66
GYPA-208ENST00000512064 PPP1R14BQ96C90 147 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 SCYL1Q96KG9 808 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 IWS1Q96ST2 819 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 TRIM6Q9C030 488 aaPredicted RBP4.71□□□□□ -1.66
GYPA-208ENST00000512064 UNC45AQ9H3U1 944 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 RMI1Q9H9A7 625 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 MRS2Q9HD23 443 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 PSD3Q9NYI0 1048 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 PARP2Q9UGN5 583 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 DDX41Q9UJV9 622 aaKnown RBP4.71□□□□□ -1.66
GYPA-208ENST00000512064 MKL2Q9ULH7 1088 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 POLIQ9UNA4 740 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 DYRK1BQ9Y463 629 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 SMG6Q86US8 1419 aaKnown RBP4.71□□□□□ -1.66
GYPA-208ENST00000512064 KIAA1107Q9UPP5 1409 aa4.71□□□□□ -1.66
GYPA-208ENST00000512064 GPR25O00155 361 aa4.7□□□□□ -1.66
GYPA-208ENST00000512064 GIPC1O14908 333 aa4.7□□□□□ -1.66
GYPA-208ENST00000512064 ZBED4O75132 1171 aa4.7□□□□□ -1.66
GYPA-208ENST00000512064 PPFIA4O75335 1185 aa4.7□□□□□ -1.66
GYPA-208ENST00000512064 WDHD1O75717 1129 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms