RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 RGS3P49796 1198 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 KCTD2Q14681 263 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 TSGA10IPQ3SY00 556 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 KLHL10Q6JEL2 608 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 AMIGO3Q86WK7 504 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 SMAP1Q8IYB5 467 aaPredicted RBP5.36□□□□□ -1.55
MATR3-219ENST00000512040 DEPDC4Q8N2C3 294 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 TTC30BQ8N4P2 665 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 BORCS6Q96GS4 357 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 C8orf48Q96LL4 319 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 TTC14Q96N46 770 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 FMNL2Q96PY5 1086 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 SEZ6LQ9BYH1 1024 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 TANGO6Q9C0B7 1094 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 PDCL3Q9H2J4 239 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 PCDH12Q9NPG4 1184 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 SFMBT1Q9UHJ3 866 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 CTDP1Q9Y5B0 961 aaPredicted RBP5.36□□□□□ -1.55
MATR3-219ENST00000512040 PCDHB11Q9Y5F2 797 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 ATP10DQ9P241 1426 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 PKD1L3Q7Z443 1732 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 KIF13BQ9NQT8 1826 aa5.36□□□□□ -1.55
MATR3-219ENST00000512040 KAT6BQ8WYB5 2073 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 N4BP2Q86UW6 1770 aaPredicted RBP5.35□□□□□ -1.55
MATR3-219ENST00000512040 C4BP0C0L5 1744 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 USP47Q96K76 1375 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 CCDC7Q96M83 1385 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.35□□□□□ -1.55
MATR3-219ENST00000512040 CARNS1A5YM72 827 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 ERVH48-1M5A8F1 160 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 ATP9BO43861 1147 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 NR3C2P08235 984 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 FAM163BP0C2L3 166 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 CT47B1P0C2W7 299 aaPredicted RBP5.35□□□□□ -1.55
MATR3-219ENST00000512040 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
MATR3-219ENST00000512040 LMOD1P29536 600 aaPredicted RBP5.35□□□□□ -1.55
MATR3-219ENST00000512040 OXLD1Q5BKU9 147 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 L1TD1Q5T7N2 865 aaKnown RBP5.35□□□□□ -1.55
MATR3-219ENST00000512040 RNF20Q5VTR2 975 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 PHTF2Q8N3S3 785 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 OGFOD1Q8N543 542 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 PLPP7Q8NBV4 271 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 VPS37AQ8NEZ2 397 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 MUC3BQ9H195 1237 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 STK32BQ9NY57 414 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 TCEAL9Q9UHQ7 104 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 ACAD8Q9UKU7 415 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 DOLKQ9UPQ8 538 aa5.35□□□□□ -1.55
MATR3-219ENST00000512040 MAFBQ9Y5Q3 323 aaPredicted RBP5.35□□□□□ -1.55
MATR3-219ENST00000512040 ANKRD26Q9UPS8 1709 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 USP31Q70CQ4 1352 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 USP17L3A6NCW0 530 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 USP17L4A6NCW7 530 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 USP17L5A8MUK1 530 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 IFRD1O00458 451 aaPredicted RBP5.34□□□□□ -1.55
MATR3-219ENST00000512040 TGFB3P10600 412 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 EIF5P55010 431 aaKnown RBP5.34□□□□□ -1.55
MATR3-219ENST00000512040 TMF1P82094 1093 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 PRR20EP86478 221 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 PRR20CP86479 221 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 PRR20DP86480 221 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 PRR20BP86481 221 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 PRR20AP86496 221 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 PSMD2Q13200 908 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 NR5A1Q13285 461 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 NNTQ13423 1086 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 DCTN1Q14203 1278 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 USP17L2Q6R6M4 530 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 SMIM5Q71RC9 77 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 USP17L1Q7RTZ2 530 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 FMNL3Q8IVF7 1028 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 CCDC116Q8IYX3 515 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 FAM43AQ8N2R8 423 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 SLC43A3Q8NBI5 491 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 STAG1Q8WVM7 1258 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 PPM1EQ8WY54 764 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 PIK3R5Q8WYR1 880 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 CEP89Q96ST8 783 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 PIF1Q9H611 641 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 AVENQ9NQS1 362 aaPredicted RBP5.34□□□□□ -1.55
MATR3-219ENST00000512040 AAASQ9NRG9 546 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 TMPRSS4Q9NRS4 437 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 TYW1Q9NV66 732 aaKnown RBP5.34□□□□□ -1.55
MATR3-219ENST00000512040 TOR4AQ9NXH8 423 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 DDX56Q9NY93 547 aaKnown RBP5.34□□□□□ -1.55
MATR3-219ENST00000512040 FAM13BQ9NYF5 915 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 KLF15Q9UIH9 416 aa5.34□□□□□ -1.55
MATR3-219ENST00000512040 C4AP0C0L4 1744 aa5.34□□□□□ -1.56
MATR3-219ENST00000512040 WDR90Q96KV7 1748 aa5.34□□□□□ -1.56
MATR3-219ENST00000512040 A0A1W2PP64 1363 aa5.33□□□□□ -1.56
MATR3-219ENST00000512040 KIF20BQ96Q89 1820 aa5.33□□□□□ -1.56
MATR3-219ENST00000512040 IPO8O15397 1037 aaKnown RBP5.33□□□□□ -1.56
MATR3-219ENST00000512040 HIP1RO75146 1068 aa5.33□□□□□ -1.56
MATR3-219ENST00000512040 LDHCP07864 332 aa5.33□□□□□ -1.56
MATR3-219ENST00000512040 SMPD1P17405 629 aa5.33□□□□□ -1.56
MATR3-219ENST00000512040 FBLN1P23142 703 aa5.33□□□□□ -1.56
MATR3-219ENST00000512040 CASQ1P31415 396 aa5.33□□□□□ -1.56
MATR3-219ENST00000512040 ATICP31939 592 aa5.33□□□□□ -1.56
MATR3-219ENST00000512040 DHX9Q08211 1270 aaKnown RBP5.33□□□□□ -1.56
MATR3-219ENST00000512040 KCNMA1Q12791 1236 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms