RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CRISPLD2Q9H0B8 497 aa23.93■■□□□ 1.42
HMGCS1-206ENST00000511774 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.93■■□□□ 1.42
HMGCS1-206ENST00000511774 KIF16BQ96L93 1317 aa23.92■■□□□ 1.42
HMGCS1-206ENST00000511774 SH3BP5LQ7L8J4 393 aa23.92■■□□□ 1.42
HMGCS1-206ENST00000511774 GDF15Q99988 308 aa23.92■■□□□ 1.42
HMGCS1-206ENST00000511774 AFG3L2Q9Y4W6 797 aa23.92■■□□□ 1.42
HMGCS1-206ENST00000511774 ZHX2Q9Y6X8 837 aa23.92■■□□□ 1.42
HMGCS1-206ENST00000511774 PTPRAP18433 802 aa23.91■■□□□ 1.42
HMGCS1-206ENST00000511774 IRF5Q13568 498 aa23.91■■□□□ 1.42
HMGCS1-206ENST00000511774 PUM3Q15397 648 aaKnown RBP23.91■■□□□ 1.42
HMGCS1-206ENST00000511774 PXYLP1Q8TE99 480 aa23.91■■□□□ 1.42
HMGCS1-206ENST00000511774 DOCK1Q14185 1865 aa23.91■■□□□ 1.42
HMGCS1-206ENST00000511774 MYH2Q9UKX2 1941 aa23.9■■□□□ 1.42
HMGCS1-206ENST00000511774 GADL1Q6ZQY3 521 aa23.9■■□□□ 1.42
HMGCS1-206ENST00000511774 Q7L0L9 218 aa23.9■■□□□ 1.42
HMGCS1-206ENST00000511774 CCDC84Q86UT8 332 aaPredicted RBP23.9■■□□□ 1.42
HMGCS1-206ENST00000511774 SCYL3Q8IZE3 742 aa23.9■■□□□ 1.42
HMGCS1-206ENST00000511774 WDR66Q8TBY9 1149 aa23.9■■□□□ 1.42
HMGCS1-206ENST00000511774 USP40Q9NVE5 1235 aa23.9■■□□□ 1.42
HMGCS1-206ENST00000511774 TNPO2O14787 897 aaKnown RBP23.89■■□□□ 1.41
HMGCS1-206ENST00000511774 IFIT1P09914 478 aaKnown RBP23.89■■□□□ 1.41
HMGCS1-206ENST00000511774 RFX5P48382 616 aaPredicted RBP23.89■■□□□ 1.41
HMGCS1-206ENST00000511774 RFX7Q2KHR2 1363 aa23.89■■□□□ 1.41
HMGCS1-206ENST00000511774 LAMA2P24043 3122 aaKnown RBP23.88■■□□□ 1.41
HMGCS1-206ENST00000511774 ZMYND8Q9ULU4 1186 aaPredicted RBP23.88■■□□□ 1.41
HMGCS1-206ENST00000511774 RGS3P49796 1198 aa23.87■■□□□ 1.41
HMGCS1-206ENST00000511774 MNX1P50219 401 aaPredicted RBP23.87■■□□□ 1.41
HMGCS1-206ENST00000511774 FASTKD5Q7L8L6 764 aaKnown RBP23.87■■□□□ 1.41
HMGCS1-206ENST00000511774 C7orf61Q8IZ16 206 aa23.87■■□□□ 1.41
HMGCS1-206ENST00000511774 TAOK2Q9UL54 1235 aa23.87■■□□□ 1.41
HMGCS1-206ENST00000511774 DDX60LQ5H9U9 1706 aaKnown RBP23.87■■□□□ 1.41
HMGCS1-206ENST00000511774 PLXNB2O15031 1838 aa23.87■■□□□ 1.41
HMGCS1-206ENST00000511774 BMP8BP34820 402 aa23.86■■□□□ 1.41
HMGCS1-206ENST00000511774 ATG9AQ7Z3C6 839 aa23.86■■□□□ 1.41
HMGCS1-206ENST00000511774 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.86■■□□□ 1.41
HMGCS1-206ENST00000511774 SLC45A1Q9Y2W3 748 aa23.86■■□□□ 1.41
HMGCS1-206ENST00000511774 DDTLA6NHG4 134 aaPredicted RBP23.85■■□□□ 1.41
HMGCS1-206ENST00000511774 MAP3K10Q02779 954 aa23.85■■□□□ 1.41
HMGCS1-206ENST00000511774 TRIM32Q13049 653 aa23.85■■□□□ 1.41
HMGCS1-206ENST00000511774 TREML2Q5T2D2 321 aa23.85■■□□□ 1.41
HMGCS1-206ENST00000511774 DEFB123Q8N688 67 aa23.85■■□□□ 1.41
HMGCS1-206ENST00000511774 ANKRD13CQ8N6S4 541 aa23.85■■□□□ 1.41
HMGCS1-206ENST00000511774 LPIN2Q92539 896 aa23.85■■□□□ 1.41
HMGCS1-206ENST00000511774 PICK1Q9NRD5 415 aa23.85■■□□□ 1.41
HMGCS1-206ENST00000511774 TRIM75PA6NK02 468 aa23.84■■□□□ 1.41
HMGCS1-206ENST00000511774 EYA2O00167 538 aa23.84■■□□□ 1.41
HMGCS1-206ENST00000511774 SLC5A1P13866 664 aa23.84■■□□□ 1.41
HMGCS1-206ENST00000511774 NECAB2Q7Z6G3 386 aa23.84■■□□□ 1.41
HMGCS1-206ENST00000511774 USP44Q9H0E7 712 aa23.84■■□□□ 1.41
HMGCS1-206ENST00000511774 DDX4Q9NQI0 724 aaKnown RBP23.84■■□□□ 1.41
HMGCS1-206ENST00000511774 LDHBP07195 334 aaKnown RBP23.83■■□□□ 1.41
HMGCS1-206ENST00000511774 SYN1P17600 705 aa23.83■■□□□ 1.41
HMGCS1-206ENST00000511774 SMCR8Q8TEV9 937 aaPredicted RBP23.83■■□□□ 1.41
HMGCS1-206ENST00000511774 IDI2Q9BXS1 227 aa23.83■■□□□ 1.41
HMGCS1-206ENST00000511774 LOC285556D6RIA3 1793 aa23.83■■□□□ 1.4
HMGCS1-206ENST00000511774 ZEB1P37275 1124 aaPredicted RBP23.82■■□□□ 1.4
HMGCS1-206ENST00000511774 AGTPBP1Q9UPW5 1226 aa23.82■■□□□ 1.4
HMGCS1-206ENST00000511774 VCANP13611 3396 aa23.82■■□□□ 1.4
HMGCS1-206ENST00000511774 ENTPD3O75355 529 aa23.81■■□□□ 1.4
HMGCS1-206ENST00000511774 MAGEA10P43363 369 aaPredicted RBP23.81■■□□□ 1.4
HMGCS1-206ENST00000511774 PHKA1P46020 1223 aa23.81■■□□□ 1.4
HMGCS1-206ENST00000511774 GPR153Q6NV75 609 aa23.81■■□□□ 1.4
HMGCS1-206ENST00000511774 MTMR10Q9NXD2 777 aa23.81■■□□□ 1.4
HMGCS1-206ENST00000511774 GAKO14976 1311 aa23.81■■□□□ 1.4
HMGCS1-206ENST00000511774 SALL1Q9NSC2 1324 aa23.81■■□□□ 1.4
HMGCS1-206ENST00000511774 DNAH12Q6ZR08 3092 aa23.8■■□□□ 1.4
HMGCS1-206ENST00000511774 MRPL50Q8N5N7 158 aaKnown RBP23.8■■□□□ 1.4
HMGCS1-206ENST00000511774 COA7Q96BR5 231 aa23.8■■□□□ 1.4
HMGCS1-206ENST00000511774 GJD2Q9UKL4 321 aa23.8■■□□□ 1.4
HMGCS1-206ENST00000511774 CTNND1O60716 968 aaKnown RBP23.79■■□□□ 1.4
HMGCS1-206ENST00000511774 CAPN2P17655 700 aa23.79■■□□□ 1.4
HMGCS1-206ENST00000511774 FAM110CQ1W6H9 321 aa23.79■■□□□ 1.4
HMGCS1-206ENST00000511774 LRIT3Q3SXY7 679 aa23.79■■□□□ 1.4
HMGCS1-206ENST00000511774 STXBP5LQ9Y2K9 1186 aa23.79■■□□□ 1.4
HMGCS1-206ENST00000511774 LRRFIP2Q9Y608 721 aaKnown RBP23.79■■□□□ 1.4
HMGCS1-206ENST00000511774 ATAD5Q96QE3 1844 aa23.79■■□□□ 1.4
HMGCS1-206ENST00000511774 FAM196BA6NMK8 535 aa23.78■■□□□ 1.4
HMGCS1-206ENST00000511774 ZSCAN29Q8IWY8 852 aaPredicted RBP23.78■■□□□ 1.4
HMGCS1-206ENST00000511774 EYSQ5T1H1 3165 aa23.78■■□□□ 1.4
HMGCS1-206ENST00000511774 HMGCRP04035 888 aa23.77■■□□□ 1.4
HMGCS1-206ENST00000511774 ATP2B3Q16720 1220 aa23.77■■□□□ 1.4
HMGCS1-206ENST00000511774 ANKLE1Q8NAG6 615 aa23.77■■□□□ 1.4
HMGCS1-206ENST00000511774 SIL1Q9H173 461 aa23.77■■□□□ 1.4
HMGCS1-206ENST00000511774 MRS2Q9HD23 443 aa23.77■■□□□ 1.4
HMGCS1-206ENST00000511774 ADORA1P30542 326 aa23.76■■□□□ 1.39
HMGCS1-206ENST00000511774 PICALMQ13492 652 aa23.76■■□□□ 1.39
HMGCS1-206ENST00000511774 RRP1BQ14684 758 aaKnown RBP23.76■■□□□ 1.39
HMGCS1-206ENST00000511774 NBPF3Q9H094 633 aa23.76■■□□□ 1.39
HMGCS1-206ENST00000511774 PFASO15067 1338 aa23.76■■□□□ 1.39
HMGCS1-206ENST00000511774 SPTBN5Q9NRC6 3674 aaKnown RBP23.75■■□□□ 1.39
HMGCS1-206ENST00000511774 PEX10O60683 326 aa23.75■■□□□ 1.39
HMGCS1-206ENST00000511774 TDHQ8IZJ6 230 aa23.75■■□□□ 1.39
HMGCS1-206ENST00000511774 ZNF384Q8TF68 577 aa23.75■■□□□ 1.39
HMGCS1-206ENST00000511774 TRIB2Q92519 343 aa23.75■■□□□ 1.39
HMGCS1-206ENST00000511774 RPTORQ8N122 1335 aa23.75■■□□□ 1.39
HMGCS1-206ENST00000511774 COL25A1Q9BXS0 654 aaPredicted RBP23.74■■□□□ 1.39
HMGCS1-206ENST00000511774 C11orf49Q9H6J7 331 aa23.74■■□□□ 1.39
HMGCS1-206ENST00000511774 OGDHLQ9ULD0 1010 aa23.74■■□□□ 1.39
HMGCS1-206ENST00000511774 DENND2AQ9ULE3 1009 aa23.74■■□□□ 1.39
HMGCS1-206ENST00000511774 BTDP43251 543 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms