RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 GPATCH4Q5T3I0 446 aaKnown RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 IFIT1BQ5T764 474 aaKnown RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 ZNF830Q96NB3 372 aaPredicted RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 PSMD1Q99460 953 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 ZC3H12CQ9C0D7 883 aaKnown RBP5.57□□□□□ -1.52
PTPN13-209ENST00000511467 KIAA1217Q5T5P2 1943 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 ELP1O95163 1332 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 SH3TC1Q8TE82 1336 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 GON4LQ3T8J9 2241 aa5.57□□□□□ -1.52
PTPN13-209ENST00000511467 FSD2A1L4K1 749 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 FERP16591 822 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 CAPN2P17655 700 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 METAP2P50579 478 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTPN13-209ENST00000511467 ATP2B3Q16720 1220 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 KIF2CQ99661 725 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 NEBLO76041 1014 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 ANXA13P27216 316 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 RETREG2Q8NC44 543 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 NEK1Q96PY6 1258 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 METTL22Q9BUU2 404 aaPredicted RBP5.56□□□□□ -1.52
PTPN13-209ENST00000511467 MYO1AQ9UBC5 1043 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 IKBKGQ9Y6K9 419 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 TJP1Q07157 1748 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 LAMA4Q16363 1823 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 PDE8AO60658 829 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 LMNB2Q03252 620 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 RTN1Q16799 776 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 ELOA2Q8IYF1 753 aaPredicted RBP5.56□□□□□ -1.52
PTPN13-209ENST00000511467 MTUS1Q9ULD2 1270 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 ARFGEF2Q9Y6D5 1785 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 PTPRMP28827 1452 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 OPA1O60313 960 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 PRPF6O94906 941 aaKnown RBP5.56□□□□□ -1.52
PTPN13-209ENST00000511467 PPP4R3CPQ6ZMV5 832 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 CCDC87Q9NVE4 849 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 BSDC1Q9NW68 430 aaPredicted RBP5.56□□□□□ -1.52
PTPN13-209ENST00000511467 CALCOCO1Q9P1Z2 691 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 FRMD4BQ9Y2L6 1034 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 PARP3Q9Y6F1 533 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 WDR81Q562E7 1941 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 ZNFX1Q9P2E3 1918 aaKnown RBP5.56□□□□□ -1.52
PTPN13-209ENST00000511467 BAZ2AQ9UIF9 1905 aaKnown RBP5.56□□□□□ -1.52
PTPN13-209ENST00000511467 ZNF233A6NK53 670 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 TOP1P11387 765 aaKnown RBP5.56□□□□□ -1.52
PTPN13-209ENST00000511467 LDHAL6AQ6ZMR3 332 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 TBC1D32Q96NH3 1257 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 DEXIO95424 95 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 DNAJC21Q5F1R6 531 aaKnown RBP5.56□□□□□ -1.52
PTPN13-209ENST00000511467 ARHGAP27Q6ZUM4 889 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 UBXN4Q92575 508 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 HOMER2Q9NSB8 354 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 RNF14Q9UBS8 474 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 SHPRHQ149N8 1683 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 SLIT3O75094 1523 aa5.56□□□□□ -1.52
PTPN13-209ENST00000511467 FKBP4Q02790 459 aaKnown RBP eCLIP5.55□□□□□ -1.52
PTPN13-209ENST00000511467 FAM196AQ6ZSG2 479 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 DHX32Q7L7V1 743 aaKnown RBP5.55□□□□□ -1.52
PTPN13-209ENST00000511467 CFAP57Q96MR6 1250 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 TIPINQ9BVW5 301 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 UTP6Q9NYH9 597 aaKnown RBP5.55□□□□□ -1.52
PTPN13-209ENST00000511467 PNMA3Q9UL41 463 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 GOLGA8JA6NMD2 632 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 RFX1P22670 979 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 IL6STP40189 918 aaPredicted RBP5.55□□□□□ -1.52
PTPN13-209ENST00000511467 TMEM132EQ6IEE7 984 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 TMCO3Q6UWJ1 677 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 SSH1Q8WYL5 1049 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 RBM42Q9BTD8 480 aaKnown RBP5.55□□□□□ -1.52
PTPN13-209ENST00000511467 PRM3Q9NNZ6 103 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 OTUD6AQ7L8S5 288 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 IFIT3O14879 490 aaKnown RBP5.55□□□□□ -1.52
PTPN13-209ENST00000511467 BBOX1O75936 387 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 POLR2BP30876 1174 aaKnown RBP5.55□□□□□ -1.52
PTPN13-209ENST00000511467 MCM4P33991 863 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 PTPN14Q15678 1187 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 LRSAM1Q6UWE0 723 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 GBP6Q6ZN66 633 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 TTLL7Q6ZT98 887 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 CNNM3Q8NE01 707 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 FAM8A1Q9UBU6 413 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 RRP7AQ9Y3A4 280 aaKnown RBP5.55□□□□□ -1.52
PTPN13-209ENST00000511467 PRRC2BQ5JSZ5 2229 aaKnown RBP5.55□□□□□ -1.52
PTPN13-209ENST00000511467 SPATA31A6Q5VVP1 1343 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 TRIM75PA6NK02 468 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 CALUO43852 315 aaPredicted RBP5.55□□□□□ -1.52
PTPN13-209ENST00000511467 KRT10P13645 584 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 VAV2P52735 878 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 AOC3Q16853 763 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 TMEM67Q5HYA8 995 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 DAAM2Q86T65 1068 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 C16orf71Q8IYS4 520 aaPredicted RBP5.55□□□□□ -1.52
PTPN13-209ENST00000511467 CHURC1Q8WUH1 139 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 LPIN2Q92539 896 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 DHX36Q9H2U1 1008 aaKnown RBP5.55□□□□□ -1.52
PTPN13-209ENST00000511467 PICK1Q9NRD5 415 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 IQSEC2Q5JU85 1478 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 TSPY3P0CV98 308 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 TSPY8P0CW00 308 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 MAP3K21Q5TCX8 1036 aa5.55□□□□□ -1.52
PTPN13-209ENST00000511467 PPP1R18Q6NYC8 613 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms