RNA–Protein interactions for RNA: ENST00000510310.1

SEC31A-231, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 4

Gene SEC31A, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-231	ENST00000510310	USP50	Q70EL3	339 aa	Predicted RBP	29.33	■■■□□ 2.29
SEC31A-231	ENST00000510310	USP26	Q9BXU7	913 aa		29.33	■■■□□ 2.29
SEC31A-231	ENST00000510310	WDHD1	O75717	1129 aa	Predicted RBP	29.32	■■■□□ 2.28
SEC31A-231	ENST00000510310	EPHX2	P34913	555 aa		29.32	■■■□□ 2.28
SEC31A-231	ENST00000510310	DCP1A	Q9NPI6	582 aa	Predicted RBP	29.32	■■■□□ 2.28
SEC31A-231	ENST00000510310	RBM8A	Q9Y5S9	174 aa	Known RBP	29.32	■■■□□ 2.28
SEC31A-231	ENST00000510310	FLT1	P17948	1338 aa		29.31	■■■□□ 2.28
SEC31A-231	ENST00000510310	CLRN2	A0PK11	232 aa		29.31	■■■□□ 2.28
SEC31A-231	ENST00000510310	EGFR	P00533	1210 aa		29.31	■■■□□ 2.28
SEC31A-231	ENST00000510310	TNNI2	P48788	182 aa		29.31	■■■□□ 2.28
SEC31A-231	ENST00000510310	TNFAIP1	Q13829	316 aa		29.31	■■■□□ 2.28
SEC31A-231	ENST00000510310	RNF20	Q5VTR2	975 aa		29.31	■■■□□ 2.28
SEC31A-231	ENST00000510310	MAPKAPK5	Q8IW41	473 aa		29.31	■■■□□ 2.28
SEC31A-231	ENST00000510310	TRPM4	Q8TD43	1214 aa		29.31	■■■□□ 2.28
SEC31A-231	ENST00000510310	VEZT	Q9HBM0	779 aa		29.31	■■■□□ 2.28
SEC31A-231	ENST00000510310	ARPP21	Q9UBL0	812 aa	Predicted RBP	29.31	■■■□□ 2.28
SEC31A-231	ENST00000510310	FOXP2	O15409	715 aa		29.3	■■■□□ 2.28
SEC31A-231	ENST00000510310	ENTPD3	O75355	529 aa		29.3	■■■□□ 2.28
SEC31A-231	ENST00000510310	FGA	P02671	866 aa		29.3	■■■□□ 2.28
SEC31A-231	ENST00000510310	PICALM	Q13492	652 aa		29.3	■■■□□ 2.28
SEC31A-231	ENST00000510310	PNMA8A	Q86V59	439 aa	Predicted RBP	29.3	■■■□□ 2.28
SEC31A-231	ENST00000510310	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	29.3	■■■□□ 2.28
SEC31A-231	ENST00000510310	MYH1	P12882	1939 aa		29.3	■■■□□ 2.28
SEC31A-231	ENST00000510310	APOBEC3F	Q8IUX4	373 aa	Known RBP	29.29	■■■□□ 2.28
SEC31A-231	ENST00000510310	MCM9	Q9NXL9	1143 aa		29.29	■■■□□ 2.28
SEC31A-231	ENST00000510310	BAZ2A	Q9UIF9	1905 aa	Known RBP	29.28	■■■□□ 2.28
SEC31A-231	ENST00000510310	POTEC	B2RU33	542 aa		29.28	■■■□□ 2.28
SEC31A-231	ENST00000510310	HTRA3	P83110	453 aa		29.28	■■■□□ 2.28
SEC31A-231	ENST00000510310	IMMT	Q16891	758 aa	Known RBP	29.28	■■■□□ 2.28
SEC31A-231	ENST00000510310	TAF1D	Q9H5J8	278 aa	Predicted RBP	29.28	■■■□□ 2.28
SEC31A-231	ENST00000510310	MKRN1	Q9UHC7	482 aa	Known RBP	29.28	■■■□□ 2.28
SEC31A-231	ENST00000510310	LAMB1	P07942	1786 aa		29.28	■■■□□ 2.28
SEC31A-231	ENST00000510310	LAMA4	Q16363	1823 aa		29.27	■■■□□ 2.28
SEC31A-231	ENST00000510310	CACNB3	P54284	484 aa		29.27	■■■□□ 2.28
SEC31A-231	ENST00000510310	FAM83A	Q86UY5	434 aa		29.27	■■■□□ 2.28
SEC31A-231	ENST00000510310	OSBPL5	Q9H0X9	879 aa	Predicted RBP	29.27	■■■□□ 2.28
SEC31A-231	ENST00000510310	DDX60L	Q5H9U9	1706 aa	Known RBP	29.27	■■■□□ 2.28
SEC31A-231	ENST00000510310	PITPNM2	Q9BZ72	1349 aa		29.26	■■■□□ 2.27
SEC31A-231	ENST00000510310	COL2A1	P02458	1487 aa	Predicted RBP	29.26	■■■□□ 2.27
SEC31A-231	ENST00000510310	TCP10L2	B9ZVM9	353 aa		29.26	■■■□□ 2.27
SEC31A-231	ENST00000510310	ZNF213	O14771	459 aa		29.26	■■■□□ 2.27
SEC31A-231	ENST00000510310	POLR3D	P05423	398 aa	Predicted RBP	29.26	■■■□□ 2.27
SEC31A-231	ENST00000510310	HSPA4	P34932	840 aa		29.26	■■■□□ 2.27
SEC31A-231	ENST00000510310	NFIA	Q12857	509 aa		29.26	■■■□□ 2.27
SEC31A-231	ENST00000510310	SBK1	Q52WX2	424 aa		29.26	■■■□□ 2.27
SEC31A-231	ENST00000510310	KLRG1	Q96E93	195 aa		29.26	■■■□□ 2.27
SEC31A-231	ENST00000510310	DHX36	Q9H2U1	1008 aa	Known RBP	29.26	■■■□□ 2.27
SEC31A-231	ENST00000510310	DDX4	Q9NQI0	724 aa	Known RBP	29.26	■■■□□ 2.27
SEC31A-231	ENST00000510310	FAM198A	Q9UFP1	575 aa		29.26	■■■□□ 2.27
SEC31A-231	ENST00000510310	ZKSCAN1	P17029	563 aa	Predicted RBP	29.25	■■■□□ 2.27
SEC31A-231	ENST00000510310	HIRA	P54198	1017 aa	Predicted RBP	29.25	■■■□□ 2.27
SEC31A-231	ENST00000510310	NECTIN1	Q15223	517 aa		29.25	■■■□□ 2.27
SEC31A-231	ENST00000510310	TTC6	Q86TZ1	520 aa		29.25	■■■□□ 2.27
SEC31A-231	ENST00000510310	ZC3H15	Q8WU90	426 aa	Known RBP	29.25	■■■□□ 2.27
SEC31A-231	ENST00000510310	FAM151A	Q8WW52	585 aa		29.25	■■■□□ 2.27
SEC31A-231	ENST00000510310	C22orf23	Q9BZE7	217 aa		29.25	■■■□□ 2.27
SEC31A-231	ENST00000510310	USP17L12	C9JPN9	530 aa		29.24	■■■□□ 2.27
SEC31A-231	ENST00000510310	USP17L21	D6R901	530 aa		29.24	■■■□□ 2.27
SEC31A-231	ENST00000510310	SLC3A2	P08195	630 aa	Known RBP	29.24	■■■□□ 2.27
SEC31A-231	ENST00000510310	TCP10	Q12799	353 aa		29.24	■■■□□ 2.27
SEC31A-231	ENST00000510310	IFFO2	Q5TF58	517 aa		29.24	■■■□□ 2.27
SEC31A-231	ENST00000510310	ANGEL2	Q5VTE6	544 aa	Known RBP	29.24	■■■□□ 2.27
SEC31A-231	ENST00000510310	CTR9	Q6PD62	1173 aa		29.24	■■■□□ 2.27
SEC31A-231	ENST00000510310	GGA3	Q9NZ52	723 aa		29.24	■■■□□ 2.27
SEC31A-231	ENST00000510310	SAP30BP	Q9UHR5	308 aa	Known RBP	29.24	■■■□□ 2.27
SEC31A-231	ENST00000510310	MINDY4B	A8MYZ0	360 aa		29.23	■■■□□ 2.27
SEC31A-231	ENST00000510310	HLA-DOA	P06340	250 aa		29.23	■■■□□ 2.27
SEC31A-231	ENST00000510310	CREB3L3	Q68CJ9	461 aa		29.23	■■■□□ 2.27
SEC31A-231	ENST00000510310	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	29.23	■■■□□ 2.27
SEC31A-231	ENST00000510310	DCPS	Q96C86	337 aa	Known RBP	29.23	■■■□□ 2.27
SEC31A-231	ENST00000510310	EAPP	Q56P03	285 aa	Predicted RBP	29.22	■■■□□ 2.27
SEC31A-231	ENST00000510310	SLC27A2	O14975	620 aa		29.21	■■■□□ 2.27
SEC31A-231	ENST00000510310	PPARA	Q07869	468 aa		29.21	■■■□□ 2.27
SEC31A-231	ENST00000510310	C12orf60	Q5U649	245 aa		29.21	■■■□□ 2.27
SEC31A-231	ENST00000510310	ANAPC4	Q9UJX5	808 aa		29.21	■■■□□ 2.27
SEC31A-231	ENST00000510310	TAOK2	Q9UL54	1235 aa		29.21	■■■□□ 2.27
SEC31A-231	ENST00000510310	PPP2R3B	Q9Y5P8	575 aa		29.21	■■■□□ 2.27
SEC31A-231	ENST00000510310	ATRNL1	Q5VV63	1379 aa		29.21	■■■□□ 2.27
SEC31A-231	ENST00000510310	ASTN2	O75129	1339 aa	Predicted RBP	29.2	■■■□□ 2.27
SEC31A-231	ENST00000510310	PALD1	Q9ULE6	856 aa		29.2	■■■□□ 2.26
SEC31A-231	ENST00000510310	CNTNAP1	P78357	1384 aa		29.2	■■■□□ 2.26
SEC31A-231	ENST00000510310	CYP21A2	P08686	494 aa		29.19	■■■□□ 2.26
SEC31A-231	ENST00000510310	RBM25	P49756	843 aa	Known RBP	29.19	■■■□□ 2.26
SEC31A-231	ENST00000510310	ANAPC15	P60006	121 aa		29.19	■■■□□ 2.26
SEC31A-231	ENST00000510310	HAND2	P61296	217 aa		29.19	■■■□□ 2.26
SEC31A-231	ENST00000510310	KRT32	Q14532	448 aa		29.19	■■■□□ 2.26
SEC31A-231	ENST00000510310	RASA3	Q14644	834 aa		29.19	■■■□□ 2.26
SEC31A-231	ENST00000510310	KCNB2	Q92953	911 aa		29.19	■■■□□ 2.26
SEC31A-231	ENST00000510310	RNF41	Q9H4P4	317 aa	Predicted RBP	29.19	■■■□□ 2.26
SEC31A-231	ENST00000510310	PC	P11498	1178 aa	Known RBP	29.18	■■■□□ 2.26
SEC31A-231	ENST00000510310	SULF1	Q8IWU6	871 aa		29.18	■■■□□ 2.26
SEC31A-231	ENST00000510310	TBC1D32	Q96NH3	1257 aa		29.18	■■■□□ 2.26
SEC31A-231	ENST00000510310	ZNF287	Q9HBT7	754 aa		29.18	■■■□□ 2.26
SEC31A-231	ENST00000510310	PI4KB	Q9UBF8	816 aa		29.18	■■■□□ 2.26
SEC31A-231	ENST00000510310	PGAP2	Q9UHJ9	254 aa		29.18	■■■□□ 2.26
SEC31A-231	ENST00000510310	ROBO3	Q96MS0	1386 aa		29.17	■■■□□ 2.26
SEC31A-231	ENST00000510310	TSGA10IP	Q3SY00	556 aa		29.17	■■■□□ 2.26
SEC31A-231	ENST00000510310	ZFPM1	Q8IX07	1006 aa		29.17	■■■□□ 2.26
SEC31A-231	ENST00000510310	JMY	Q8N9B5	988 aa		29.17	■■■□□ 2.26
SEC31A-231	ENST00000510310	HOOK2	Q96ED9	719 aa		29.17	■■■□□ 2.26

Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms