RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 GRIK5Q16478 980 aa12.16□□□□□ -0.46
NEK1-205ENST00000510108 DOK7Q18PE1 504 aa12.16□□□□□ -0.46
NEK1-205ENST00000510108 DACT2Q5SW24 774 aa12.16□□□□□ -0.46
NEK1-205ENST00000510108 CERS5Q8N5B7 392 aa12.16□□□□□ -0.46
NEK1-205ENST00000510108 TAOK3Q9H2K8 898 aa12.16□□□□□ -0.46
NEK1-205ENST00000510108 DBNDD1Q9H9R9 158 aa12.16□□□□□ -0.46
NEK1-205ENST00000510108 CTNNA3Q9UI47 895 aa12.16□□□□□ -0.46
NEK1-205ENST00000510108 JAG2Q9Y219 1238 aa12.16□□□□□ -0.46
NEK1-205ENST00000510108 NAV1Q8NEY1 1877 aa12.16□□□□□ -0.46
NEK1-205ENST00000510108 YDJCA8MPS7 323 aa12.15□□□□□ -0.46
NEK1-205ENST00000510108 PATL2C9JE40 543 aaKnown RBP12.15□□□□□ -0.46
NEK1-205ENST00000510108 NFKBIEO00221 500 aa12.15□□□□□ -0.46
NEK1-205ENST00000510108 CYP21A2P08686 494 aa12.15□□□□□ -0.46
NEK1-205ENST00000510108 IARSP41252 1262 aaKnown RBP12.15□□□□□ -0.46
NEK1-205ENST00000510108 KRT32Q14532 448 aa12.15□□□□□ -0.46
NEK1-205ENST00000510108 TTLL5Q6EMB2 1281 aa12.15□□□□□ -0.46
NEK1-205ENST00000510108 GIMAP6Q6P9H5 292 aa12.15□□□□□ -0.46
NEK1-205ENST00000510108 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
NEK1-205ENST00000510108 MRIQ9BWK5 157 aa12.15□□□□□ -0.46
NEK1-205ENST00000510108 ARMT1Q9H993 441 aa12.15□□□□□ -0.46
NEK1-205ENST00000510108 EPB41L4AQ9HCS5 686 aaPredicted RBP12.15□□□□□ -0.46
NEK1-205ENST00000510108 ADAMTSL1Q8N6G6 1762 aa12.14□□□□□ -0.47
NEK1-205ENST00000510108 GPR75-ASB3A0A0A6YYF3 556 aa12.14□□□□□ -0.47
NEK1-205ENST00000510108 USP17L3A6NCW0 530 aa12.14□□□□□ -0.47
NEK1-205ENST00000510108 USP17L4A6NCW7 530 aa12.14□□□□□ -0.47
NEK1-205ENST00000510108 GSG1L2A8MUP6 293 aa12.14□□□□□ -0.47
NEK1-205ENST00000510108 FGAP02671 866 aa12.14□□□□□ -0.47
NEK1-205ENST00000510108 USP17L1Q7RTZ2 530 aa12.14□□□□□ -0.47
NEK1-205ENST00000510108 MIGA1Q8NAN2 632 aa12.14□□□□□ -0.47
NEK1-205ENST00000510108 LARP6Q9BRS8 491 aaKnown RBP12.14□□□□□ -0.47
NEK1-205ENST00000510108 ZSWIM6Q9HCJ5 1215 aa12.14□□□□□ -0.47
NEK1-205ENST00000510108 DICER1Q9UPY3 1922 aaKnown RBP12.14□□□□□ -0.47
NEK1-205ENST00000510108 ECM29Q5VYK3 1845 aa12.14□□□□□ -0.47
NEK1-205ENST00000510108 MYO3BQ8WXR4 1341 aa12.14□□□□□ -0.47
NEK1-205ENST00000510108 PSMA5P28066 241 aa12.13□□□□□ -0.47
NEK1-205ENST00000510108 HDLBPQ00341 1268 aaKnown RBP12.13□□□□□ -0.47
NEK1-205ENST00000510108 BECN1Q14457 450 aa12.13□□□□□ -0.47
NEK1-205ENST00000510108 IMMTQ16891 758 aaKnown RBP12.13□□□□□ -0.47
NEK1-205ENST00000510108 ADCK5Q3MIX3 580 aa12.13□□□□□ -0.47
NEK1-205ENST00000510108 IFNL3Q8IZI9 196 aa12.13□□□□□ -0.47
NEK1-205ENST00000510108 LARGE2Q8N3Y3 721 aa12.13□□□□□ -0.47
NEK1-205ENST00000510108 TTC14Q96N46 770 aa12.13□□□□□ -0.47
NEK1-205ENST00000510108 TBC1D2Q9BYX2 928 aa12.13□□□□□ -0.47
NEK1-205ENST00000510108 ZNF277Q9NRM2 450 aaPredicted RBP12.13□□□□□ -0.47
NEK1-205ENST00000510108 SLC4A4Q9Y6R1 1079 aa12.13□□□□□ -0.47
NEK1-205ENST00000510108 ST18O60284 1047 aa12.12□□□□□ -0.47
NEK1-205ENST00000510108 BAG3O95817 575 aa12.12□□□□□ -0.47
NEK1-205ENST00000510108 DYNLL1P63167 89 aaKnown RBP12.12□□□□□ -0.47
NEK1-205ENST00000510108 MFSD10Q14728 455 aa12.12□□□□□ -0.47
NEK1-205ENST00000510108 DIXDC1Q155Q3 683 aa12.12□□□□□ -0.47
NEK1-205ENST00000510108 HHIPL2Q6UWX4 724 aa12.12□□□□□ -0.47
NEK1-205ENST00000510108 JDP2Q8WYK2 163 aa12.12□□□□□ -0.47
NEK1-205ENST00000510108 CRNKL1Q9BZJ0 848 aaKnown RBP12.12□□□□□ -0.47
NEK1-205ENST00000510108 NACAP1Q9BZK3 213 aa12.12□□□□□ -0.47
NEK1-205ENST00000510108 ALDH8A1Q9H2A2 487 aaPredicted RBP12.12□□□□□ -0.47
NEK1-205ENST00000510108 ATP8A2Q9NTI2 1148 aa12.12□□□□□ -0.47
NEK1-205ENST00000510108 AATFQ9NY61 560 aaKnown RBP eCLIP12.12□□□□□ -0.47
NEK1-205ENST00000510108 DAGLAQ9Y4D2 1042 aa12.12□□□□□ -0.47
NEK1-205ENST00000510108 TAF6LQ9Y6J9 622 aa12.12□□□□□ -0.47
NEK1-205ENST00000510108 GOLGB1Q14789 3259 aaKnown RBP12.12□□□□□ -0.47
NEK1-205ENST00000510108 PRKAB2O43741 272 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 CD2BP2O95400 341 aaKnown RBP12.11□□□□□ -0.47
NEK1-205ENST00000510108 VIL1P09327 827 aaKnown RBP12.11□□□□□ -0.47
NEK1-205ENST00000510108 MCM2P49736 904 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 FOXK1P85037 733 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 DSG2Q14126 1118 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 STOX1Q6ZVD7 989 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 HSCBQ8IWL3 235 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 NIM1KQ8IY84 436 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 JAKMIP1Q96N16 626 aaKnown RBP12.11□□□□□ -0.47
NEK1-205ENST00000510108 GMLQ99445 158 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 NBPF3Q9H094 633 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 NAPBQ9H115 298 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 KCNQ5Q9NR82 932 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 MKRN1Q9UHC7 482 aaKnown RBP12.11□□□□□ -0.47
NEK1-205ENST00000510108 ANAPC4Q9UJX5 808 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 ZNRF3Q9ULT6 936 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 BAZ2AQ9UIF9 1905 aaKnown RBP12.11□□□□□ -0.47
NEK1-205ENST00000510108 ROBO3Q96MS0 1386 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 E7EWF7 191 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 SBF1O95248 1867 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 HMGB1P09429 215 aaKnown RBP12.11□□□□□ -0.47
NEK1-205ENST00000510108 YBX3P16989 372 aaKnown RBP eCLIP12.11□□□□□ -0.47
NEK1-205ENST00000510108 LMNB1P20700 586 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 CASTP20810 708 aaKnown RBP12.11□□□□□ -0.47
NEK1-205ENST00000510108 BTDP43251 543 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 NEK4P51957 841 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 RHBDL3P58872 404 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 SBK1Q52WX2 424 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 RSBN1LQ6PCB5 846 aaPredicted RBP12.11□□□□□ -0.47
NEK1-205ENST00000510108 RUFY3Q7L099 469 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 FBXW7Q969H0 707 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 DDX27Q96GQ7 796 aaKnown RBP12.11□□□□□ -0.47
NEK1-205ENST00000510108 NEK1Q96PY6 1258 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
NEK1-205ENST00000510108 DCP1AQ9NPI6 582 aaPredicted RBP12.11□□□□□ -0.47
NEK1-205ENST00000510108 SERPINA10Q9UK55 444 aa12.11□□□□□ -0.47
NEK1-205ENST00000510108 TTF2Q9UNY4 1162 aaKnown RBP12.11□□□□□ -0.47
NEK1-205ENST00000510108 WDR19Q8NEZ3 1342 aa12.1□□□□□ -0.47
NEK1-205ENST00000510108 K7ELQ4 463 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms