RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 CDPF1Q6NVV7 123 aa11.33□□□□□ -0.6
TRAPPC11-206ENST00000509857 CLEC10AQ8IUN9 316 aa11.33□□□□□ -0.6
TRAPPC11-206ENST00000509857 RELL1Q8IUW5 271 aa11.33□□□□□ -0.6
TRAPPC11-206ENST00000509857 MIR1-1HGQ9H1L0 117 aa11.33□□□□□ -0.6
TRAPPC11-206ENST00000509857 ACSS3Q9H6R3 686 aa11.33□□□□□ -0.6
TRAPPC11-206ENST00000509857 PCDHA4Q9UN74 947 aa11.33□□□□□ -0.6
TRAPPC11-206ENST00000509857 SCAMP3O14828 347 aaKnown RBP11.32□□□□□ -0.6
TRAPPC11-206ENST00000509857 LMNB1P20700 586 aa11.32□□□□□ -0.6
TRAPPC11-206ENST00000509857 ZNF76P36508 570 aa11.32□□□□□ -0.6
TRAPPC11-206ENST00000509857 ASPAP45381 313 aa11.32□□□□□ -0.6
TRAPPC11-206ENST00000509857 SEPT6Q14141 434 aa11.32□□□□□ -0.6
TRAPPC11-206ENST00000509857 ZNF428Q96B54 188 aa11.32□□□□□ -0.6
TRAPPC11-206ENST00000509857 FAM83CQ9BQN1 747 aa11.32□□□□□ -0.6
TRAPPC11-206ENST00000509857 COPRSQ9NQ92 184 aa11.32□□□□□ -0.6
TRAPPC11-206ENST00000509857 KBTBD4Q9NVX7 518 aa11.32□□□□□ -0.6
TRAPPC11-206ENST00000509857 SHROOM4Q9ULL8 1493 aa11.32□□□□□ -0.6
TRAPPC11-206ENST00000509857 USP11P51784 963 aa11.31□□□□□ -0.6
TRAPPC11-206ENST00000509857 RING1Q06587 406 aa11.31□□□□□ -0.6
TRAPPC11-206ENST00000509857 CAMK2GQ13555 558 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC11-206ENST00000509857 YIPF2Q9BWQ6 316 aa11.31□□□□□ -0.6
TRAPPC11-206ENST00000509857 C7orf69Q9H7B7 122 aa11.31□□□□□ -0.6
TRAPPC11-206ENST00000509857 KCNQ5Q9NR82 932 aa11.31□□□□□ -0.6
TRAPPC11-206ENST00000509857 STOML1Q9UBI4 398 aa11.31□□□□□ -0.6
TRAPPC11-206ENST00000509857 GGT7Q9UJ14 662 aa11.31□□□□□ -0.6
TRAPPC11-206ENST00000509857 NACADO15069 1562 aa11.3□□□□□ -0.6
TRAPPC11-206ENST00000509857 GBP2P32456 591 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC11-206ENST00000509857 BEND4Q6ZU67 534 aa11.3□□□□□ -0.6
TRAPPC11-206ENST00000509857 F6X3S4 739 aa11.29□□□□□ -0.6
TRAPPC11-206ENST00000509857 PF4P02776 101 aa11.29□□□□□ -0.6
TRAPPC11-206ENST00000509857 INPP5AQ14642 412 aa11.29□□□□□ -0.6
TRAPPC11-206ENST00000509857 LRFN4Q6PJG9 635 aa11.29□□□□□ -0.6
TRAPPC11-206ENST00000509857 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC11-206ENST00000509857 RNF214Q8ND24 703 aa11.29□□□□□ -0.6
TRAPPC11-206ENST00000509857 FBLIM1Q8WUP2 373 aa11.29□□□□□ -0.6
TRAPPC11-206ENST00000509857 SNCAIPQ9Y6H5 919 aa11.29□□□□□ -0.6
TRAPPC11-206ENST00000509857 K7ELQ4 463 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC11-206ENST00000509857 GARTP22102 1010 aa11.28□□□□□ -0.6
TRAPPC11-206ENST00000509857 RNF34Q969K3 372 aa11.28□□□□□ -0.6
TRAPPC11-206ENST00000509857 KCNF1Q9H3M0 494 aa11.28□□□□□ -0.6
TRAPPC11-206ENST00000509857 SEMA6CQ9H3T2 930 aa11.28□□□□□ -0.6
TRAPPC11-206ENST00000509857 FAM95CA0A1B0GW59 222 aa11.27□□□□□ -0.61
TRAPPC11-206ENST00000509857 NEFMP07197 916 aa11.27□□□□□ -0.61
TRAPPC11-206ENST00000509857 RAB6AP20340 208 aa11.27□□□□□ -0.61
TRAPPC11-206ENST00000509857 NTF4P34130 210 aa11.27□□□□□ -0.61
TRAPPC11-206ENST00000509857 TTLL4Q14679 1199 aa11.27□□□□□ -0.61
TRAPPC11-206ENST00000509857 CYFIP1Q7L576 1253 aa11.27□□□□□ -0.61
TRAPPC11-206ENST00000509857 HDXQ7Z353 690 aa11.27□□□□□ -0.61
TRAPPC11-206ENST00000509857 SLC51AQ86UW1 340 aa11.27□□□□□ -0.61
TRAPPC11-206ENST00000509857 PLPPR2Q96GM1 343 aa11.27□□□□□ -0.61
TRAPPC11-206ENST00000509857 SEMA6BQ9H3T3 888 aa11.27□□□□□ -0.61
TRAPPC11-206ENST00000509857 TACC3Q9Y6A5 838 aa11.27□□□□□ -0.61
TRAPPC11-206ENST00000509857 HMX2A2RU54 273 aa11.26□□□□□ -0.61
TRAPPC11-206ENST00000509857 FAM221AA4D161 298 aa11.26□□□□□ -0.61
TRAPPC11-206ENST00000509857 DCDC2CA8MYV0 355 aa11.26□□□□□ -0.61
TRAPPC11-206ENST00000509857 FANCGO15287 622 aa11.26□□□□□ -0.61
TRAPPC11-206ENST00000509857 ITGB7P26010 798 aa11.26□□□□□ -0.61
TRAPPC11-206ENST00000509857 MAP7Q14244 749 aa11.26□□□□□ -0.61
TRAPPC11-206ENST00000509857 WIPI1Q5MNZ9 446 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC11-206ENST00000509857 METTL16Q86W50 562 aaKnown RBP11.26□□□□□ -0.61
TRAPPC11-206ENST00000509857 PIDD1Q9HB75 910 aa11.26□□□□□ -0.61
TRAPPC11-206ENST00000509857 GFRA2O00451 464 aa11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 GSC2O15499 205 aa11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 CILPO75339 1184 aa11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 NFICP08651 508 aa11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 FSTP19883 344 aa11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 RXRBP28702 533 aa11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 RBM25P49756 843 aaKnown RBP11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 RPL6Q02878 288 aaKnown RBP11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 PPM1JQ5JR12 505 aa11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 ZBTB37Q5TC79 503 aa11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 RNF43Q68DV7 783 aa11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 PAOXQ6QHF9 649 aa11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 SEZ6L2Q6UXD5 910 aa11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 BNC2Q6ZN30 1099 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 GATAD2BQ8WXI9 593 aa11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 ELMO3Q96BJ8 720 aa11.25□□□□□ -0.61
TRAPPC11-206ENST00000509857 MINDY4BA8MYZ0 360 aa11.24□□□□□ -0.61
TRAPPC11-206ENST00000509857 ADAM23O75077 832 aa11.24□□□□□ -0.61
TRAPPC11-206ENST00000509857 CDK8P49336 464 aa11.24□□□□□ -0.61
TRAPPC11-206ENST00000509857 SNAP47Q5SQN1 464 aa11.24□□□□□ -0.61
TRAPPC11-206ENST00000509857 C12orf40Q86WS4 652 aa11.24□□□□□ -0.61
TRAPPC11-206ENST00000509857 SMYD4Q8IYR2 804 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC11-206ENST00000509857 ISL2Q96A47 359 aa11.24□□□□□ -0.61
TRAPPC11-206ENST00000509857 CSADQ9Y600 493 aa11.24□□□□□ -0.61
TRAPPC11-206ENST00000509857 F13A1P00488 732 aa11.23□□□□□ -0.61
TRAPPC11-206ENST00000509857 HCLS1P14317 486 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC11-206ENST00000509857 EIF4A3P38919 411 aaKnown RBP11.23□□□□□ -0.61
TRAPPC11-206ENST00000509857 HDLBPQ00341 1268 aaKnown RBP11.23□□□□□ -0.61
TRAPPC11-206ENST00000509857 FAM160A1Q05DH4 1040 aa11.23□□□□□ -0.61
TRAPPC11-206ENST00000509857 PRSS36Q5K4E3 855 aa11.23□□□□□ -0.61
TRAPPC11-206ENST00000509857 GOLM1Q8NBJ4 401 aa11.23□□□□□ -0.61
TRAPPC11-206ENST00000509857 JARID2Q92833 1246 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC11-206ENST00000509857 ADAMTS1Q9UHI8 967 aa11.23□□□□□ -0.61
TRAPPC11-206ENST00000509857 GREM1O60565 184 aa11.22□□□□□ -0.61
TRAPPC11-206ENST00000509857 NFIAQ12857 509 aa11.22□□□□□ -0.61
TRAPPC11-206ENST00000509857 DIEXFQ68CQ4 756 aaKnown RBP11.22□□□□□ -0.61
TRAPPC11-206ENST00000509857 FBXL19Q6PCT2 694 aa11.22□□□□□ -0.61
TRAPPC11-206ENST00000509857 FAM196AQ6ZSG2 479 aa11.22□□□□□ -0.61
TRAPPC11-206ENST00000509857 DAGLAQ9Y4D2 1042 aa11.22□□□□□ -0.61
TRAPPC11-206ENST00000509857 IGLV1-40P01703 118 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms