RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, humanhuman

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-208ENST00000509620 GPAT2Q6NUI2 795 aa6.91□□□□□ -1.3
OTUD4-208ENST00000509620 USP48Q86UV5 1035 aa6.91□□□□□ -1.3
OTUD4-208ENST00000509620 SPOCK3Q9BQ16 436 aa6.91□□□□□ -1.3
OTUD4-208ENST00000509620 CEP41Q9BYV8 373 aa6.91□□□□□ -1.3
OTUD4-208ENST00000509620 TPSG1Q9NRR2 321 aa6.91□□□□□ -1.3
OTUD4-208ENST00000509620 ACTL7BQ9Y614 415 aa6.91□□□□□ -1.3
OTUD4-208ENST00000509620 SART1O43290 800 aaKnown RBP6.9□□□□□ -1.3
OTUD4-208ENST00000509620 F13A1P00488 732 aa6.9□□□□□ -1.3
OTUD4-208ENST00000509620 LMNB1P20700 586 aa6.9□□□□□ -1.3
OTUD4-208ENST00000509620 RAD51AP2Q09MP3 1159 aa6.9□□□□□ -1.3
OTUD4-208ENST00000509620 SGO2Q562F6 1265 aa6.9□□□□□ -1.3
OTUD4-208ENST00000509620 FBXL19Q6PCT2 694 aa6.9□□□□□ -1.3
OTUD4-208ENST00000509620 LRFN4Q6PJG9 635 aa6.9□□□□□ -1.3
OTUD4-208ENST00000509620 DYMQ7RTS9 669 aa6.9□□□□□ -1.3
OTUD4-208ENST00000509620 C12orf40Q86WS4 652 aa6.9□□□□□ -1.3
OTUD4-208ENST00000509620 TRIM42Q8IWZ5 723 aa6.9□□□□□ -1.3
OTUD4-208ENST00000509620 FBXO27Q8NI29 283 aa6.9□□□□□ -1.3
OTUD4-208ENST00000509620 MIR1-1HGQ9H1L0 117 aa6.9□□□□□ -1.3
OTUD4-208ENST00000509620 CRIM1Q9NZV1 1036 aa6.9□□□□□ -1.3
OTUD4-208ENST00000509620 DDX41Q9UJV9 622 aaKnown RBP6.9□□□□□ -1.3
OTUD4-208ENST00000509620 SLFN14P0C7P3 912 aa6.89□□□□□ -1.31
OTUD4-208ENST00000509620 EIF4A3P38919 411 aaKnown RBP6.89□□□□□ -1.31
OTUD4-208ENST00000509620 ID3Q02535 119 aa6.89□□□□□ -1.31
OTUD4-208ENST00000509620 PWP1Q13610 501 aa6.89□□□□□ -1.31
OTUD4-208ENST00000509620 ZC3H12AQ5D1E8 599 aaKnown RBP6.89□□□□□ -1.31
OTUD4-208ENST00000509620 SNAP47Q5SQN1 464 aa6.89□□□□□ -1.31
OTUD4-208ENST00000509620 CDPF1Q6NVV7 123 aa6.89□□□□□ -1.31
OTUD4-208ENST00000509620 GOLM1Q8NBJ4 401 aa6.89□□□□□ -1.31
OTUD4-208ENST00000509620 UTP4Q969X6 686 aaKnown RBP6.89□□□□□ -1.31
OTUD4-208ENST00000509620 TP53INP1Q96A56 240 aa6.89□□□□□ -1.31
OTUD4-208ENST00000509620 PLPPR2Q96GM1 343 aa6.89□□□□□ -1.31
OTUD4-208ENST00000509620 FANCD2OSQ96PS1 177 aa6.89□□□□□ -1.31
OTUD4-208ENST00000509620 DISC1Q9NRI5 854 aa6.89□□□□□ -1.31
OTUD4-208ENST00000509620 FAM105AQ9NUU6 356 aa6.89□□□□□ -1.31
OTUD4-208ENST00000509620 SYNGAP1Q96PV0 1343 aa6.88□□□□□ -1.31
OTUD4-208ENST00000509620 FAM221AA4D161 298 aa6.88□□□□□ -1.31
OTUD4-208ENST00000509620 TLR3O15455 904 aaKnown RBP6.88□□□□□ -1.31
OTUD4-208ENST00000509620 GAS2O43903 313 aaKnown RBP6.88□□□□□ -1.31
OTUD4-208ENST00000509620 PPM1JQ5JR12 505 aa6.88□□□□□ -1.31
OTUD4-208ENST00000509620 WIPI1Q5MNZ9 446 aaPredicted RBP6.88□□□□□ -1.31
OTUD4-208ENST00000509620 SCARA3Q6AZY7 606 aa6.88□□□□□ -1.31
OTUD4-208ENST00000509620 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.88□□□□□ -1.31
OTUD4-208ENST00000509620 ZNF296Q8WUU4 475 aaPredicted RBP6.88□□□□□ -1.31
OTUD4-208ENST00000509620 GSX1Q9H4S2 264 aaPredicted RBP6.88□□□□□ -1.31
OTUD4-208ENST00000509620 HIF3AQ9Y2N7 669 aa6.88□□□□□ -1.31
OTUD4-208ENST00000509620 MSTNO14793 375 aa6.87□□□□□ -1.31
OTUD4-208ENST00000509620 NEFMP07197 916 aa6.87□□□□□ -1.31
OTUD4-208ENST00000509620 BMP3P12645 472 aa6.87□□□□□ -1.31
OTUD4-208ENST00000509620 ASPAP45381 313 aa6.87□□□□□ -1.31
OTUD4-208ENST00000509620 CRKP46108 304 aa6.87□□□□□ -1.31
OTUD4-208ENST00000509620 TTLL4Q14679 1199 aa6.87□□□□□ -1.31
OTUD4-208ENST00000509620 UBE3DQ7Z6J8 389 aa6.87□□□□□ -1.31
OTUD4-208ENST00000509620 FBLIM1Q8WUP2 373 aa6.87□□□□□ -1.31
OTUD4-208ENST00000509620 ELMO3Q96BJ8 720 aa6.87□□□□□ -1.31
OTUD4-208ENST00000509620 MYRFLQ96LU7 910 aa6.87□□□□□ -1.31
OTUD4-208ENST00000509620 KCNQ5Q9NR82 932 aa6.87□□□□□ -1.31
OTUD4-208ENST00000509620 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.87□□□□□ -1.31
OTUD4-208ENST00000509620 BTBD11A6QL63 1104 aa6.86□□□□□ -1.31
OTUD4-208ENST00000509620 GFRA2O00451 464 aa6.86□□□□□ -1.31
OTUD4-208ENST00000509620 GREM1O60565 184 aa6.86□□□□□ -1.31
OTUD4-208ENST00000509620 CILPO75339 1184 aa6.86□□□□□ -1.31
OTUD4-208ENST00000509620 HCLS1P14317 486 aaPredicted RBP6.86□□□□□ -1.31
OTUD4-208ENST00000509620 RAB6AP20340 208 aa6.86□□□□□ -1.31
OTUD4-208ENST00000509620 ERCC5P28715 1186 aaPredicted RBP6.86□□□□□ -1.31
OTUD4-208ENST00000509620 USP11P51784 963 aa6.86□□□□□ -1.31
OTUD4-208ENST00000509620 RING1Q06587 406 aa6.86□□□□□ -1.31
OTUD4-208ENST00000509620 CYFIP1Q7L576 1253 aa6.86□□□□□ -1.31
OTUD4-208ENST00000509620 FAM20CQ8IXL6 584 aa6.86□□□□□ -1.31
OTUD4-208ENST00000509620 GATAD2BQ8WXI9 593 aa6.86□□□□□ -1.31
OTUD4-208ENST00000509620 EAF1Q96JC9 268 aaPredicted RBP6.86□□□□□ -1.31
OTUD4-208ENST00000509620 SPON2Q9BUD6 331 aa6.86□□□□□ -1.31
OTUD4-208ENST00000509620 ACBD3Q9H3P7 528 aa6.86□□□□□ -1.31
OTUD4-208ENST00000509620 UBP1Q9NZI7 540 aa6.86□□□□□ -1.31
OTUD4-208ENST00000509620 NTF4P34130 210 aa6.85□□□□□ -1.31
OTUD4-208ENST00000509620 TNNI2P48788 182 aa6.85□□□□□ -1.31
OTUD4-208ENST00000509620 ERVK-24P63145 666 aa6.85□□□□□ -1.31
OTUD4-208ENST00000509620 RPL6Q02878 288 aaKnown RBP6.85□□□□□ -1.31
OTUD4-208ENST00000509620 UVSSAQ2YD98 709 aa6.85□□□□□ -1.31
OTUD4-208ENST00000509620 FAM196AQ6ZSG2 479 aa6.85□□□□□ -1.31
OTUD4-208ENST00000509620 CCDC84Q86UT8 332 aaPredicted RBP6.85□□□□□ -1.31
OTUD4-208ENST00000509620 KIAA0825Q8IV33 1275 aa6.85□□□□□ -1.31
OTUD4-208ENST00000509620 ZNF654Q8IZM8 581 aa6.85□□□□□ -1.31
OTUD4-208ENST00000509620 ATXN3LQ9H3M9 355 aa6.85□□□□□ -1.31
OTUD4-208ENST00000509620 ACSS3Q9H6R3 686 aa6.85□□□□□ -1.31
OTUD4-208ENST00000509620 LGR6Q9HBX8 967 aa6.85□□□□□ -1.31
OTUD4-208ENST00000509620 SUPT16HQ9Y5B9 1047 aaKnown RBP6.85□□□□□ -1.31
OTUD4-208ENST00000509620 PRAMEF27A3QJZ7 478 aa6.84□□□□□ -1.31
OTUD4-208ENST00000509620 DYNC1LI2O43237 492 aaPredicted RBP6.84□□□□□ -1.31
OTUD4-208ENST00000509620 NFICP08651 508 aa6.84□□□□□ -1.31
OTUD4-208ENST00000509620 MAP4P27816 1152 aaKnown RBP6.84□□□□□ -1.31
OTUD4-208ENST00000509620 RXRBP28702 533 aa6.84□□□□□ -1.31
OTUD4-208ENST00000509620 HNRNPUQ00839 825 aaKnown RBP eCLIP6.84□□□□□ -1.31
OTUD4-208ENST00000509620 RSPO4Q2I0M5 234 aaPredicted RBP6.84□□□□□ -1.31
OTUD4-208ENST00000509620 HDXQ7Z353 690 aa6.84□□□□□ -1.31
OTUD4-208ENST00000509620 TGIF2Q9GZN2 237 aa6.84□□□□□ -1.31
OTUD4-208ENST00000509620 KCNF1Q9H3M0 494 aa6.84□□□□□ -1.31
OTUD4-208ENST00000509620 POLR3KQ9Y2Y1 108 aaPredicted RBP6.84□□□□□ -1.31
OTUD4-208ENST00000509620 RNGTTO60942 597 aaKnown RBP6.83□□□□□ -1.32
OTUD4-208ENST00000509620 PAK2Q13177 524 aa6.83□□□□□ -1.32
OTUD4-208ENST00000509620 NKAPLQ5M9Q1 402 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms