RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 SDR42E1Q8WUS8 393 aa17.77■□□□□ 0.44
RNF4-213ENST00000509388 GLIS2Q9BZE0 524 aaPredicted RBP17.77■□□□□ 0.44
RNF4-213ENST00000509388 ATP8A2Q9NTI2 1148 aa17.77■□□□□ 0.44
RNF4-213ENST00000509388 CCDC171Q6TFL3 1326 aa17.76■□□□□ 0.43
RNF4-213ENST00000509388 RAD50Q92878 1312 aa17.76■□□□□ 0.43
RNF4-213ENST00000509388 SUPT20HL1Q3ZLR7 823 aa17.76■□□□□ 0.43
RNF4-213ENST00000509388 TMEM39BQ9GZU3 492 aa17.76■□□□□ 0.43
RNF4-213ENST00000509388 OSBPL5Q9H0X9 879 aaPredicted RBP17.76■□□□□ 0.43
RNF4-213ENST00000509388 FAM198AQ9UFP1 575 aa17.76■□□□□ 0.43
RNF4-213ENST00000509388 FLT1P17948 1338 aa17.75■□□□□ 0.43
RNF4-213ENST00000509388 POLR3DP05423 398 aaPredicted RBP17.75■□□□□ 0.43
RNF4-213ENST00000509388 NF2P35240 595 aa17.75■□□□□ 0.43
RNF4-213ENST00000509388 TDO2P48775 406 aa17.75■□□□□ 0.43
RNF4-213ENST00000509388 HOOK2Q96ED9 719 aa17.75■□□□□ 0.43
RNF4-213ENST00000509388 DHX36Q9H2U1 1008 aaKnown RBP17.75■□□□□ 0.43
RNF4-213ENST00000509388 DDX4Q9NQI0 724 aaKnown RBP17.75■□□□□ 0.43
RNF4-213ENST00000509388 MCM9Q9NXL9 1143 aa17.75■□□□□ 0.43
RNF4-213ENST00000509388 MYO5AQ9Y4I1 1855 aaKnown RBP17.75■□□□□ 0.43
RNF4-213ENST00000509388 ADAMTSL1Q8N6G6 1762 aa17.74■□□□□ 0.43
RNF4-213ENST00000509388 SGSM2O43147 1006 aa17.74■□□□□ 0.43
RNF4-213ENST00000509388 HLA-DOAP06340 250 aa17.74■□□□□ 0.43
RNF4-213ENST00000509388 PRAMEF18Q5VWM3 479 aa17.74■□□□□ 0.43
RNF4-213ENST00000509388 ZNF589Q86UQ0 364 aaPredicted RBP17.74■□□□□ 0.43
RNF4-213ENST00000509388 ZFPM1Q8IX07 1006 aa17.74■□□□□ 0.43
RNF4-213ENST00000509388 NAPBQ9H115 298 aa17.74■□□□□ 0.43
RNF4-213ENST00000509388 DCP1AQ9NPI6 582 aaPredicted RBP17.74■□□□□ 0.43
RNF4-213ENST00000509388 SAP30BPQ9UHR5 308 aaKnown RBP17.74■□□□□ 0.43
RNF4-213ENST00000509388 RPAP1Q9BWH6 1393 aaPredicted RBP17.74■□□□□ 0.43
RNF4-213ENST00000509388 GSG1L2A8MUP6 293 aa17.73■□□□□ 0.43
RNF4-213ENST00000509388 FSTL1Q12841 308 aa17.73■□□□□ 0.43
RNF4-213ENST00000509388 GIMAP6Q6P9H5 292 aa17.73■□□□□ 0.43
RNF4-213ENST00000509388 TTC6Q86TZ1 520 aa17.73■□□□□ 0.43
RNF4-213ENST00000509388 IFNL3Q8IZI9 196 aa17.73■□□□□ 0.43
RNF4-213ENST00000509388 CDCA5Q96FF9 252 aa17.73■□□□□ 0.43
RNF4-213ENST00000509388 CSRNP1Q96S65 589 aa17.73■□□□□ 0.43
RNF4-213ENST00000509388 ESYT1Q9BSJ8 1104 aa17.73■□□□□ 0.43
RNF4-213ENST00000509388 TRIM34Q9BYJ4 488 aa17.73■□□□□ 0.43
RNF4-213ENST00000509388 ZNF408Q9H9D4 720 aa17.73■□□□□ 0.43
RNF4-213ENST00000509388 CNTNAP1P78357 1384 aa17.73■□□□□ 0.43
RNF4-213ENST00000509388 TRAF5O00463 557 aa17.72■□□□□ 0.43
RNF4-213ENST00000509388 HSPD1P10809 573 aaKnown RBP17.72■□□□□ 0.43
RNF4-213ENST00000509388 PI4KBQ9UBF8 816 aa17.72■□□□□ 0.43
RNF4-213ENST00000509388 PALD1Q9ULE6 856 aa17.72■□□□□ 0.43
RNF4-213ENST00000509388 EIF5BO60841 1220 aaKnown RBP17.71■□□□□ 0.43
RNF4-213ENST00000509388 ITGBL1O95965 494 aaPredicted RBP17.71■□□□□ 0.43
RNF4-213ENST00000509388 SLC4A8Q2Y0W8 1093 aa17.71■□□□□ 0.43
RNF4-213ENST00000509388 NBPF12Q5TAG4 269 aaPredicted RBP17.71■□□□□ 0.43
RNF4-213ENST00000509388 VPS53Q5VIR6 699 aa17.71■□□□□ 0.43
RNF4-213ENST00000509388 DLK2Q6UY11 383 aa17.71■□□□□ 0.43
RNF4-213ENST00000509388 CRACR2BQ8N4Y2 399 aaPredicted RBP17.71■□□□□ 0.43
RNF4-213ENST00000509388 ANO2Q9NQ90 1003 aa17.71■□□□□ 0.43
RNF4-213ENST00000509388 ARPP21Q9UBL0 812 aaPredicted RBP17.71■□□□□ 0.43
RNF4-213ENST00000509388 DDTLA6NHG4 134 aaPredicted RBP17.7■□□□□ 0.42
RNF4-213ENST00000509388 MINDY4BA8MYZ0 360 aa17.7■□□□□ 0.42
RNF4-213ENST00000509388 USP17L12C9JPN9 530 aa17.7■□□□□ 0.42
RNF4-213ENST00000509388 USP17L21D6R901 530 aa17.7■□□□□ 0.42
RNF4-213ENST00000509388 TTLL12Q14166 644 aaPredicted RBP17.7■□□□□ 0.42
RNF4-213ENST00000509388 DCAF15Q66K64 600 aa17.7■□□□□ 0.42
RNF4-213ENST00000509388 TEPSINQ96N21 525 aa17.7■□□□□ 0.42
RNF4-213ENST00000509388 DSCC1Q9BVC3 393 aa17.7■□□□□ 0.42
RNF4-213ENST00000509388 MKRN1Q9UHC7 482 aaKnown RBP17.7■□□□□ 0.42
RNF4-213ENST00000509388 CTNNA3Q9UI47 895 aa17.7■□□□□ 0.42
RNF4-213ENST00000509388 MYH7P12883 1935 aa17.7■□□□□ 0.42
RNF4-213ENST00000509388 AK9Q5TCS8 1911 aa17.69■□□□□ 0.42
RNF4-213ENST00000509388 PPP1R12BO60237 982 aaPredicted RBP17.69■□□□□ 0.42
RNF4-213ENST00000509388 CELF2O95319 508 aaKnown RBP17.69■□□□□ 0.42
RNF4-213ENST00000509388 SLC3A2P08195 630 aaKnown RBP17.69■□□□□ 0.42
RNF4-213ENST00000509388 CTR9Q6PD62 1173 aa17.69■□□□□ 0.42
RNF4-213ENST00000509388 SH3BP5LQ7L8J4 393 aa17.69■□□□□ 0.42
RNF4-213ENST00000509388 FOXP4Q8IVH2 680 aaPredicted RBP17.69■□□□□ 0.42
RNF4-213ENST00000509388 IL25Q9H293 177 aa17.69■□□□□ 0.42
RNF4-213ENST00000509388 EPB41L4AQ9HCS5 686 aaPredicted RBP17.69■□□□□ 0.42
RNF4-213ENST00000509388 ATRNL1Q5VV63 1379 aa17.68■□□□□ 0.42
RNF4-213ENST00000509388 REC8O95072 547 aa17.68■□□□□ 0.42
RNF4-213ENST00000509388 FGAP02671 866 aa17.68■□□□□ 0.42
RNF4-213ENST00000509388 PRKG1Q13976 671 aa17.68■□□□□ 0.42
RNF4-213ENST00000509388 ALX1Q15699 326 aa17.68■□□□□ 0.42
RNF4-213ENST00000509388 SBK1Q52WX2 424 aa17.68■□□□□ 0.42
RNF4-213ENST00000509388 MIGA2Q7L4E1 593 aa17.68■□□□□ 0.42
RNF4-213ENST00000509388 CDAN1Q8IWY9 1227 aa17.68■□□□□ 0.42
RNF4-213ENST00000509388 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.68■□□□□ 0.42
RNF4-213ENST00000509388 CYP2D6P10635 497 aa17.67■□□□□ 0.42
RNF4-213ENST00000509388 PLCD1P51178 756 aa17.67■□□□□ 0.42
RNF4-213ENST00000509388 FMR1Q06787 632 aaKnown RBP eCLIP17.67■□□□□ 0.42
RNF4-213ENST00000509388 C12orf60Q5U649 245 aa17.67■□□□□ 0.42
RNF4-213ENST00000509388 C2orf69Q8N8R5 385 aa17.67■□□□□ 0.42
RNF4-213ENST00000509388 HERC5Q9UII4 1024 aaKnown RBP17.67■□□□□ 0.42
RNF4-213ENST00000509388 SERPINB13Q9UIV8 391 aa17.67■□□□□ 0.42
RNF4-213ENST00000509388 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
RNF4-213ENST00000509388 COL2A1P02458 1487 aaPredicted RBP17.67■□□□□ 0.42
RNF4-213ENST00000509388 ZNF213O14771 459 aa17.66■□□□□ 0.42
RNF4-213ENST00000509388 IMMTQ16891 758 aaKnown RBP17.66■□□□□ 0.42
RNF4-213ENST00000509388 ARMC9Q7Z3E5 817 aa17.66■□□□□ 0.42
RNF4-213ENST00000509388 ZNF341Q9BYN7 854 aa17.66■□□□□ 0.42
RNF4-213ENST00000509388 EHD4Q9H223 541 aa17.66■□□□□ 0.42
RNF4-213ENST00000509388 ANGEL1Q9UNK9 670 aaKnown RBP17.66■□□□□ 0.42
RNF4-213ENST00000509388 CYP2D7A0A087X1C5 515 aa17.65■□□□□ 0.42
RNF4-213ENST00000509388 FOXP2O15409 715 aa17.65■□□□□ 0.42
RNF4-213ENST00000509388 IREB2P48200 963 aaKnown RBP17.65■□□□□ 0.42
RNF4-213ENST00000509388 PTH1RQ03431 593 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms