RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 JMYQ8N9B5 988 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 GSG1L2A8MUP6 293 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 KIF28PB7ZC32 967 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 NPHP1O15259 732 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 ZSCAN20P17040 1043 aaPredicted RBP12.69□□□□□ -0.38
SEC31A-228ENST00000509142 KCNQ4P56696 695 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 WTAPQ15007 396 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 SAFBQ15424 915 aaKnown RBP eCLIP12.69□□□□□ -0.38
SEC31A-228ENST00000509142 TRIM22Q8IYM9 498 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 IGDCC4Q8TDY8 1250 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 NUP133Q8WUM0 1156 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 BCL11BQ9C0K0 894 aaPredicted RBP12.69□□□□□ -0.38
SEC31A-228ENST00000509142 RNF41Q9H4P4 317 aaPredicted RBP12.69□□□□□ -0.38
SEC31A-228ENST00000509142 ATRNO75882 1429 aa12.69□□□□□ -0.38
SEC31A-228ENST00000509142 GYG1P46976 350 aa12.68□□□□□ -0.38
SEC31A-228ENST00000509142 FAM98CQ17RN3 349 aaKnown RBP12.68□□□□□ -0.38
SEC31A-228ENST00000509142 UBAC1Q9BSL1 405 aa12.68□□□□□ -0.38
SEC31A-228ENST00000509142 LY9Q9HBG7 655 aa12.68□□□□□ -0.38
SEC31A-228ENST00000509142 AKAP11Q9UKA4 1901 aa12.68□□□□□ -0.38
SEC31A-228ENST00000509142 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
SEC31A-228ENST00000509142 U2AF2P26368 475 aaKnown RBP eCLIP12.68□□□□□ -0.382e-7■■□□□ 14.5
SEC31A-228ENST00000509142 CDC25BP30305 580 aa12.68□□□□□ -0.38
SEC31A-228ENST00000509142 ERFEQ4G0M1 354 aa12.68□□□□□ -0.38
SEC31A-228ENST00000509142 SPATA31A5Q5VU36 1347 aa12.68□□□□□ -0.38
SEC31A-228ENST00000509142 SPATA31A7Q8IWB4 1347 aa12.68□□□□□ -0.38
SEC31A-228ENST00000509142 SLC3A2P08195 630 aaKnown RBP12.68□□□□□ -0.38
SEC31A-228ENST00000509142 CCZ1BP86790 482 aa12.68□□□□□ -0.38
SEC31A-228ENST00000509142 CCZ1P86791 482 aaPredicted RBP12.68□□□□□ -0.38
SEC31A-228ENST00000509142 CHAF1AQ13111 956 aaPredicted RBP12.68□□□□□ -0.38
SEC31A-228ENST00000509142 WASF1Q92558 559 aa12.68□□□□□ -0.38
SEC31A-228ENST00000509142 MYH7P12883 1935 aa12.67□□□□□ -0.38
SEC31A-228ENST00000509142 TNNT1P13805 278 aa12.67□□□□□ -0.38
SEC31A-228ENST00000509142 LIFRP42702 1097 aa12.67□□□□□ -0.38
SEC31A-228ENST00000509142 ROBO1Q9Y6N7 1651 aa12.67□□□□□ -0.38
SEC31A-228ENST00000509142 MAGEB6P1A0A0J9YX57 407 aa12.67□□□□□ -0.38
SEC31A-228ENST00000509142 RTN1Q16799 776 aa12.67□□□□□ -0.38
SEC31A-228ENST00000509142 MRFAP1L1Q96HT8 127 aa12.67□□□□□ -0.38
SEC31A-228ENST00000509142 BIN1O00499 593 aa12.67□□□□□ -0.38
SEC31A-228ENST00000509142 CLEC4GQ6UXB4 293 aa12.67□□□□□ -0.38
SEC31A-228ENST00000509142 SGMS1Q86VZ5 419 aa12.67□□□□□ -0.38
SEC31A-228ENST00000509142 ZNF202O95125 648 aa12.66□□□□□ -0.38
SEC31A-228ENST00000509142 DPCR1Q3MIW9 517 aa12.66□□□□□ -0.38
SEC31A-228ENST00000509142 SMAP1Q8IYB5 467 aaPredicted RBP12.66□□□□□ -0.38
SEC31A-228ENST00000509142 AOPEPQ8N6M6 819 aa12.66□□□□□ -0.38
SEC31A-228ENST00000509142 RBM6P78332 1123 aaKnown RBP12.66□□□□□ -0.38
SEC31A-228ENST00000509142 AKAP17AQ02040 695 aaKnown RBP12.66□□□□□ -0.38
SEC31A-228ENST00000509142 TMTC2Q8N394 836 aa12.66□□□□□ -0.38
SEC31A-228ENST00000509142 SDR42E1Q8WUS8 393 aa12.66□□□□□ -0.38
SEC31A-228ENST00000509142 NGLY1Q96IV0 654 aa12.66□□□□□ -0.38
SEC31A-228ENST00000509142 ANKRD36CQ5JPF3 1778 aa12.66□□□□□ -0.38
SEC31A-228ENST00000509142 CCDC196A0A1B0GTZ2 297 aa12.66□□□□□ -0.38
SEC31A-228ENST00000509142 SLC39A14Q15043 492 aa12.66□□□□□ -0.38
SEC31A-228ENST00000509142 PDCL2Q8N4E4 241 aa12.66□□□□□ -0.38
SEC31A-228ENST00000509142 KIAA1468Q9P260 1216 aa12.66□□□□□ -0.38
SEC31A-228ENST00000509142 TPM4P67936 248 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 DOT1LQ8TEK3 1739 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 PNPLA7Q6ZV29 1317 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 CMA1P23946 247 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 SYKP43405 635 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 PPARAQ07869 468 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 UBE4AQ14139 1066 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 BARGINQ6ZT62 677 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 NYAP1Q6ZVC0 841 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 FILIP1Q7Z7B0 1213 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 STAG1Q8WVM7 1258 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 MYO5AQ9Y4I1 1855 aaKnown RBP12.65□□□□□ -0.38
SEC31A-228ENST00000509142 C4AP0C0L4 1744 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 C4BP0C0L5 1744 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 PFKFB1P16118 471 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 ESR2Q92731 530 aa12.65□□□□□ -0.38
SEC31A-228ENST00000509142 SMIM5Q71RC9 77 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 C8orf37Q96NL8 207 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 MROH7-TTC4A0A0A0MT08 1334 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 SMTNL1A8MU46 457 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 UBE2Q2LH0YL09 131 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 RANBP6O60518 1105 aaKnown RBP12.64□□□□□ -0.39
SEC31A-228ENST00000509142 ZPR1O75312 459 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 WDHD1O75717 1129 aaPredicted RBP12.64□□□□□ -0.39
SEC31A-228ENST00000509142 ATP2B1P20020 1258 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 AXDND1Q5T1B0 1012 aaPredicted RBP12.64□□□□□ -0.39
SEC31A-228ENST00000509142 LINC00116Q8NCU8 138 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 NLRP3Q96P20 1036 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 SETDB2Q96T68 719 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 BSDC1Q9NW68 430 aaPredicted RBP12.64□□□□□ -0.39
SEC31A-228ENST00000509142 RTL9Q8NET4 1388 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 SKILP12757 684 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 NTRK3Q16288 839 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 TPD52L1Q16890 204 aaPredicted RBP12.64□□□□□ -0.39
SEC31A-228ENST00000509142 ISM2Q6H9L7 571 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 NBPF5PQ86XG9 351 aaPredicted RBP12.64□□□□□ -0.39
SEC31A-228ENST00000509142 CMTR1Q8N1G2 835 aaKnown RBP12.64□□□□□ -0.39
SEC31A-228ENST00000509142 HSD3B7Q9H2F3 369 aa12.64□□□□□ -0.39
SEC31A-228ENST00000509142 FMNL1O95466 1100 aaPredicted RBP12.63□□□□□ -0.39
SEC31A-228ENST00000509142 IFNAR1P17181 557 aa12.63□□□□□ -0.39
SEC31A-228ENST00000509142 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.63□□□□□ -0.39
SEC31A-228ENST00000509142 TRMT1Q9NXH9 659 aaKnown RBP12.63□□□□□ -0.39
SEC31A-228ENST00000509142 MINPP1Q9UNW1 487 aa12.63□□□□□ -0.39
SEC31A-228ENST00000509142 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.63□□□□□ -0.39
SEC31A-228ENST00000509142 NCAPHQ15003 741 aa12.63□□□□□ -0.39
SEC31A-228ENST00000509142 C3orf67Q6ZVT6 689 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms