RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 CFAP100Q494V2 611 aa12.35□□□□□ -0.43
RFC1-211ENST00000509084 APOBEC3HQ6NTF7 200 aaKnown RBP12.35□□□□□ -0.43
RFC1-211ENST00000509084 SH3RF3Q8TEJ3 882 aaPredicted RBP12.35□□□□□ -0.43
RFC1-211ENST00000509084 EPB41L4AQ9HCS5 686 aaPredicted RBP12.35□□□□□ -0.43
RFC1-211ENST00000509084 GJA3Q9Y6H8 435 aa12.35□□□□□ -0.43
RFC1-211ENST00000509084 ADAMTSL1Q8N6G6 1762 aa12.35□□□□□ -0.43
RFC1-211ENST00000509084 ECM29Q5VYK3 1845 aa12.34□□□□□ -0.43
RFC1-211ENST00000509084 DDX60LQ5H9U9 1706 aaKnown RBP12.34□□□□□ -0.43
RFC1-211ENST00000509084 PRKAB2O43741 272 aa12.34□□□□□ -0.43
RFC1-211ENST00000509084 MYO1BO43795 1136 aa12.34□□□□□ -0.43
RFC1-211ENST00000509084 CYP21A2P08686 494 aa12.34□□□□□ -0.43
RFC1-211ENST00000509084 PCP11498 1178 aaKnown RBP12.34□□□□□ -0.43
RFC1-211ENST00000509084 PSMA5P28066 241 aa12.34□□□□□ -0.43
RFC1-211ENST00000509084 NT5C2P49902 561 aa12.34□□□□□ -0.43
RFC1-211ENST00000509084 GMPSP49915 693 aaPredicted RBP12.34□□□□□ -0.43
RFC1-211ENST00000509084 SBK1Q52WX2 424 aa12.34□□□□□ -0.43
RFC1-211ENST00000509084 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
RFC1-211ENST00000509084 SDR42E1Q8WUS8 393 aa12.34□□□□□ -0.43
RFC1-211ENST00000509084 TM6SF1Q9BZW5 370 aa12.34□□□□□ -0.43
RFC1-211ENST00000509084 DCP1AQ9NPI6 582 aaPredicted RBP12.34□□□□□ -0.43
RFC1-211ENST00000509084 USP40Q9NVE5 1235 aa12.34□□□□□ -0.43
RFC1-211ENST00000509084 RBM19Q9Y4C8 960 aaKnown RBP12.34□□□□□ -0.43
RFC1-211ENST00000509084 SNX14Q9Y5W7 946 aa12.34□□□□□ -0.43
RFC1-211ENST00000509084 H7C1D1 291 aa12.33□□□□□ -0.44
RFC1-211ENST00000509084 SLC3A2P08195 630 aaKnown RBP12.33□□□□□ -0.44
RFC1-211ENST00000509084 HMGB1P09429 215 aaKnown RBP12.33□□□□□ -0.44
RFC1-211ENST00000509084 CDC42EP5Q6NZY7 148 aa12.33□□□□□ -0.44
RFC1-211ENST00000509084 TGFBRAP1Q8WUH2 860 aa12.33□□□□□ -0.44
RFC1-211ENST00000509084 IDI2Q9BXS1 227 aa12.33□□□□□ -0.44
RFC1-211ENST00000509084 RNF41Q9H4P4 317 aaPredicted RBP12.33□□□□□ -0.44
RFC1-211ENST00000509084 MYOZ2Q9NPC6 264 aa12.33□□□□□ -0.44
RFC1-211ENST00000509084 ANAPC4Q9UJX5 808 aa12.33□□□□□ -0.44
RFC1-211ENST00000509084 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
RFC1-211ENST00000509084 PALD1Q9ULE6 856 aa12.33□□□□□ -0.44
RFC1-211ENST00000509084 CDK5RAP2Q96SN8 1893 aa12.33□□□□□ -0.44
RFC1-211ENST00000509084 FLT1P17948 1338 aa12.33□□□□□ -0.44
RFC1-211ENST00000509084 COL2A1P02458 1487 aaPredicted RBP12.33□□□□□ -0.44
RFC1-211ENST00000509084 CD44P16070 742 aaKnown RBP12.32□□□□□ -0.44
RFC1-211ENST00000509084 LMOD1P29536 600 aaPredicted RBP12.32□□□□□ -0.44
RFC1-211ENST00000509084 PPARAQ07869 468 aa12.32□□□□□ -0.44
RFC1-211ENST00000509084 TRDNQ13061 729 aa12.32□□□□□ -0.44
RFC1-211ENST00000509084 FKBP1CQ5VVH2 108 aa12.32□□□□□ -0.44
RFC1-211ENST00000509084 MICALL2Q8IY33 904 aa12.32□□□□□ -0.44
RFC1-211ENST00000509084 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
RFC1-211ENST00000509084 CNNM2Q9H8M5 875 aa12.32□□□□□ -0.44
RFC1-211ENST00000509084 MCM9Q9NXL9 1143 aa12.32□□□□□ -0.44
RFC1-211ENST00000509084 GPRC5DQ9NZD1 345 aa12.32□□□□□ -0.44
RFC1-211ENST00000509084 MKRN1Q9UHC7 482 aaKnown RBP12.32□□□□□ -0.44
RFC1-211ENST00000509084 CNOT7Q9UIV1 285 aaKnown RBP12.32□□□□□ -0.44
RFC1-211ENST00000509084 ROBO3Q96MS0 1386 aa12.31□□□□□ -0.44
RFC1-211ENST00000509084 ST18O60284 1047 aa12.31□□□□□ -0.44
RFC1-211ENST00000509084 ENTPD3O75355 529 aa12.31□□□□□ -0.44
RFC1-211ENST00000509084 WDHD1O75717 1129 aaPredicted RBP12.31□□□□□ -0.44
RFC1-211ENST00000509084 POLR3DP05423 398 aaPredicted RBP12.31□□□□□ -0.44
RFC1-211ENST00000509084 CTR9Q6PD62 1173 aa12.31□□□□□ -0.44
RFC1-211ENST00000509084 RALYLQ86SE5 291 aaKnown RBP12.31□□□□□ -0.44
RFC1-211ENST00000509084 TTC6Q86TZ1 520 aa12.31□□□□□ -0.44
RFC1-211ENST00000509084 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
RFC1-211ENST00000509084 STAG1Q8WVM7 1258 aa12.31□□□□□ -0.44
RFC1-211ENST00000509084 ZBED3Q96IU2 234 aaPredicted RBP12.31□□□□□ -0.44
RFC1-211ENST00000509084 JAKMIP1Q96N16 626 aaKnown RBP12.31□□□□□ -0.44
RFC1-211ENST00000509084 NEK1Q96PY6 1258 aa12.31□□□□□ -0.44
RFC1-211ENST00000509084 KIF2CQ99661 725 aa12.31□□□□□ -0.44
RFC1-211ENST00000509084 OSBPL5Q9H0X9 879 aaPredicted RBP12.31□□□□□ -0.44
RFC1-211ENST00000509084 DHX36Q9H2U1 1008 aaKnown RBP12.31□□□□□ -0.44
RFC1-211ENST00000509084 ZNF287Q9HBT7 754 aa12.31□□□□□ -0.44
RFC1-211ENST00000509084 SRCAPQ6ZRS2 3230 aa12.31□□□□□ -0.44
RFC1-211ENST00000509084 MINDY4BA8MYZ0 360 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 USP17L12C9JPN9 530 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 USP17L21D6R901 530 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 E7EWF7 191 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 WNT10BO00744 389 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 HLA-DOAP06340 250 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 TNNI2P48788 182 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 HAND2P61296 217 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 TNFAIP1Q13829 316 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 KIF4BQ2VIQ3 1234 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 AKNAD1Q5T1N1 836 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 C12orf60Q5U649 245 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 BLOC1S2Q6QNY1 142 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 MAPKAPK5Q8IW41 473 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 NCOA7Q8NI08 942 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 L3MBTL3Q96JM7 780 aaPredicted RBP12.3□□□□□ -0.44
RFC1-211ENST00000509084 PRMT6Q96LA8 375 aaPredicted RBP12.3□□□□□ -0.44
RFC1-211ENST00000509084 KRT23Q9C075 422 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 TDRD3Q9H7E2 651 aaKnown RBP12.3□□□□□ -0.44
RFC1-211ENST00000509084 CYP46A1Q9Y6A2 500 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 MYH1P12882 1939 aa12.3□□□□□ -0.44
RFC1-211ENST00000509084 BAZ2AQ9UIF9 1905 aaKnown RBP12.3□□□□□ -0.44
RFC1-211ENST00000509084 GLTPD2A6NH11 291 aa12.29□□□□□ -0.44
RFC1-211ENST00000509084 DDNO94850 711 aaPredicted RBP12.29□□□□□ -0.44
RFC1-211ENST00000509084 CASTP20810 708 aaKnown RBP12.29□□□□□ -0.44
RFC1-211ENST00000509084 MCM2P49736 904 aa12.29□□□□□ -0.44
RFC1-211ENST00000509084 EVX2Q03828 476 aa12.29□□□□□ -0.44
RFC1-211ENST00000509084 PDE4BQ07343 736 aa12.29□□□□□ -0.44
RFC1-211ENST00000509084 PICALMQ13492 652 aa12.29□□□□□ -0.44
RFC1-211ENST00000509084 MFSD6Q6ZSS7 791 aa12.29□□□□□ -0.44
RFC1-211ENST00000509084 FAM83AQ86UY5 434 aa12.29□□□□□ -0.44
RFC1-211ENST00000509084 ZSWIM6Q9HCJ5 1215 aa12.29□□□□□ -0.44
RFC1-211ENST00000509084 ADARB2Q9NS39 739 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms