RNA–Protein interactions for RNA: ENST00000509048.1

RETREG1-204, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-204ENST00000509048 MS4A1P11836 297 aa28.23■■■□□ 2.11
RETREG1-204ENST00000509048 CCDC158Q5M9N0 1113 aa28.23■■■□□ 2.11
RETREG1-204ENST00000509048 ZNF512BQ96KM6 892 aaPredicted RBP28.23■■■□□ 2.11
RETREG1-204ENST00000509048 MAP4K4O95819 1239 aaPredicted RBP28.22■■■□□ 2.11
RETREG1-204ENST00000509048 LDHCP07864 332 aa28.22■■■□□ 2.11
RETREG1-204ENST00000509048 MAP3K10Q02779 954 aa28.22■■■□□ 2.11
RETREG1-204ENST00000509048 MLLT1Q03111 559 aaPredicted RBP28.22■■■□□ 2.11
RETREG1-204ENST00000509048 TTC39AQ5SRH9 613 aa28.22■■■□□ 2.11
RETREG1-204ENST00000509048 ERO1AQ96HE7 468 aa28.22■■■□□ 2.11
RETREG1-204ENST00000509048 ZCCHC17Q9NP64 241 aaKnown RBP28.22■■■□□ 2.11
RETREG1-204ENST00000509048 RAI14Q9P0K7 980 aa28.22■■■□□ 2.11
RETREG1-204ENST00000509048 TNRC18O15417 2968 aaPredicted RBP28.22■■■□□ 2.11
RETREG1-204ENST00000509048 PHF20L1A8MW92 1017 aa28.21■■■□□ 2.11
RETREG1-204ENST00000509048 NPM3O75607 178 aaKnown RBP28.21■■■□□ 2.11
RETREG1-204ENST00000509048 TAF1CQ15572 869 aaPredicted RBP28.21■■■□□ 2.11
RETREG1-204ENST00000509048 OTOP1Q7RTM1 612 aa28.21■■■□□ 2.11
RETREG1-204ENST00000509048 DDTLA6NHG4 134 aaPredicted RBP28.2■■■□□ 2.1
RETREG1-204ENST00000509048 BTBD19C9JJ37 291 aa28.2■■■□□ 2.1
RETREG1-204ENST00000509048 SP3Q02447 781 aa28.2■■■□□ 2.1
RETREG1-204ENST00000509048 PICALMQ13492 652 aa28.2■■■□□ 2.1
RETREG1-204ENST00000509048 ZSCAN29Q8IWY8 852 aaPredicted RBP28.2■■■□□ 2.1
RETREG1-204ENST00000509048 ZFYVE28Q9HCC9 887 aa28.2■■■□□ 2.1
RETREG1-204ENST00000509048 LRP2BPQ9P2M1 347 aa28.2■■■□□ 2.1
RETREG1-204ENST00000509048 DBNLQ9UJU6 430 aaKnown RBP28.2■■■□□ 2.1
RETREG1-204ENST00000509048 KCNH4Q9UQ05 1017 aa28.2■■■□□ 2.1
RETREG1-204ENST00000509048 CD99L2Q8TCZ2 262 aa28.19■■■□□ 2.1
RETREG1-204ENST00000509048 SNRKQ9NRH2 765 aa28.19■■■□□ 2.1
RETREG1-204ENST00000509048 TRIM17Q9Y577 477 aa28.19■■■□□ 2.1
RETREG1-204ENST00000509048 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.18■■■□□ 2.1
RETREG1-204ENST00000509048 EAF2Q96CJ1 260 aaPredicted RBP28.18■■■□□ 2.1
RETREG1-204ENST00000509048 TLR7Q9NYK1 1049 aaKnown RBP28.18■■■□□ 2.1
RETREG1-204ENST00000509048 CYP2E1P05181 493 aaPredicted RBP28.17■■■□□ 2.1
RETREG1-204ENST00000509048 SOX10P56693 466 aa28.17■■■□□ 2.1
RETREG1-204ENST00000509048 MAST2Q6P0Q8 1798 aa28.16■■■□□ 2.1
RETREG1-204ENST00000509048 COL2A1P02458 1487 aaPredicted RBP28.16■■■□□ 2.1
RETREG1-204ENST00000509048 IGSF3O75054 1194 aa28.16■■■□□ 2.1
RETREG1-204ENST00000509048 CCDC8Q9H0W5 538 aaPredicted RBP28.16■■■□□ 2.1
RETREG1-204ENST00000509048 TLR2O60603 784 aa28.15■■■□□ 2.1
RETREG1-204ENST00000509048 CAP1Q01518 475 aa28.15■■■□□ 2.1
RETREG1-204ENST00000509048 ERC1Q8IUD2 1116 aa28.15■■■□□ 2.1
RETREG1-204ENST00000509048 SCYL3Q8IZE3 742 aa28.15■■■□□ 2.1
RETREG1-204ENST00000509048 RCAN3Q9UKA8 241 aa28.15■■■□□ 2.1
RETREG1-204ENST00000509048 DDX19BQ9UMR2 479 aa28.15■■■□□ 2.1
RETREG1-204ENST00000509048 EXOC6BQ9Y2D4 811 aa28.15■■■□□ 2.1
RETREG1-204ENST00000509048 TBC1D12O60347 775 aa28.14■■■□□ 2.1
RETREG1-204ENST00000509048 ZAP70P43403 619 aa28.14■■■□□ 2.1
RETREG1-204ENST00000509048 MOGSQ13724 837 aa28.14■■■□□ 2.1
RETREG1-204ENST00000509048 NAA16Q6N069 864 aaPredicted RBP28.14■■■□□ 2.1
RETREG1-204ENST00000509048 ANKRD23Q86SG2 305 aa28.14■■■□□ 2.1
RETREG1-204ENST00000509048 EFCC1Q9HA90 598 aa28.14■■■□□ 2.1
RETREG1-204ENST00000509048 ZBTB40Q9NUA8 1239 aa28.14■■■□□ 2.1
RETREG1-204ENST00000509048 BRCA2P51587 3418 aa28.13■■■□□ 2.09
RETREG1-204ENST00000509048 CXCL11O14625 94 aa28.13■■■□□ 2.09
RETREG1-204ENST00000509048 SLURP2P0DP57 97 aa28.13■■■□□ 2.09
RETREG1-204ENST00000509048 OSBPL5Q9H0X9 879 aaPredicted RBP28.13■■■□□ 2.09
RETREG1-204ENST00000509048 PTPN22Q9Y2R2 807 aa28.13■■■□□ 2.09
RETREG1-204ENST00000509048 COG6Q9Y2V7 657 aa28.13■■■□□ 2.09
RETREG1-204ENST00000509048 CTNND1O60716 968 aaKnown RBP28.12■■■□□ 2.09
RETREG1-204ENST00000509048 PTPRAP18433 802 aa28.12■■■□□ 2.09
RETREG1-204ENST00000509048 HSP90AB4PQ58FF6 505 aa28.12■■■□□ 2.09
RETREG1-204ENST00000509048 TEX11Q8IYF3 940 aa28.12■■■□□ 2.09
RETREG1-204ENST00000509048 SH3RF3Q8TEJ3 882 aaPredicted RBP28.12■■■□□ 2.09
RETREG1-204ENST00000509048 PICK1Q9NRD5 415 aa28.12■■■□□ 2.09
RETREG1-204ENST00000509048 PPP4CP60510 307 aa28.11■■■□□ 2.09
RETREG1-204ENST00000509048 RPAP2Q8IXW5 612 aaPredicted RBP28.11■■■□□ 2.09
RETREG1-204ENST00000509048 NOL10Q9BSC4 688 aaKnown RBP28.11■■■□□ 2.09
RETREG1-204ENST00000509048 PIH1D3Q9NQM4 214 aaKnown RBP28.11■■■□□ 2.09
RETREG1-204ENST00000509048 MYO5AQ9Y4I1 1855 aaKnown RBP28.1■■■□□ 2.09
RETREG1-204ENST00000509048 BAG3O95817 575 aa28.1■■■□□ 2.09
RETREG1-204ENST00000509048 ADGRA1Q86SQ6 560 aa28.1■■■□□ 2.09
RETREG1-204ENST00000509048 AATFQ9NY61 560 aaKnown RBP eCLIP28.1■■■□□ 2.09
RETREG1-204ENST00000509048 ZHX2Q9Y6X8 837 aa28.1■■■□□ 2.09
RETREG1-204ENST00000509048 DOCK1Q14185 1865 aa28.1■■■□□ 2.09
RETREG1-204ENST00000509048 PDHXO00330 501 aa28.09■■■□□ 2.09
RETREG1-204ENST00000509048 PLCG2P16885 1265 aa28.09■■■□□ 2.09
RETREG1-204ENST00000509048 SIRT2Q8IXJ6 389 aa28.09■■■□□ 2.09
RETREG1-204ENST00000509048 AFG3L2Q9Y4W6 797 aa28.09■■■□□ 2.09
RETREG1-204ENST00000509048 ARHGEF6Q15052 776 aa28.08■■■□□ 2.09
RETREG1-204ENST00000509048 AACSQ86V21 672 aa28.08■■■□□ 2.09
RETREG1-204ENST00000509048 RHPN1Q8TCX5 695 aa28.08■■■□□ 2.09
RETREG1-204ENST00000509048 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.08■■■□□ 2.09
RETREG1-204ENST00000509048 PHIPQ8WWQ0 1821 aa28.07■■■□□ 2.08
RETREG1-204ENST00000509048 A0A0G2JLL6 359 aaPredicted RBP28.07■■■□□ 2.08
RETREG1-204ENST00000509048 GPAT2Q6NUI2 795 aa28.07■■■□□ 2.08
RETREG1-204ENST00000509048 C17orf99Q6UX52 265 aa28.07■■■□□ 2.08
RETREG1-204ENST00000509048 PRRT2Q7Z6L0 340 aaPredicted RBP28.07■■■□□ 2.08
RETREG1-204ENST00000509048 MKI67P46013 3256 aaKnown RBP28.07■■■□□ 2.08
RETREG1-204ENST00000509048 ADGRA2Q96PE1 1338 aa28.07■■■□□ 2.08
RETREG1-204ENST00000509048 FAM196BA6NMK8 535 aa28.06■■■□□ 2.08
RETREG1-204ENST00000509048 HMMRO75330 724 aa28.06■■■□□ 2.08
RETREG1-204ENST00000509048 LACTBP83111 547 aaPredicted RBP28.06■■■□□ 2.08
RETREG1-204ENST00000509048 CHMP4BQ9H444 224 aaKnown RBP28.06■■■□□ 2.08
RETREG1-204ENST00000509048 IL1RAPL2Q9NP60 686 aa28.06■■■□□ 2.08
RETREG1-204ENST00000509048 FOCADQ5VW36 1801 aa28.05■■■□□ 2.08
RETREG1-204ENST00000509048 DHX36Q9H2U1 1008 aaKnown RBP28.05■■■□□ 2.08
RETREG1-204ENST00000509048 HERC5Q9UII4 1024 aaKnown RBP28.05■■■□□ 2.08
RETREG1-204ENST00000509048 PTPRFP10586 1907 aa28.04■■■□□ 2.08
RETREG1-204ENST00000509048 CDK5RAP2Q96SN8 1893 aa28.04■■■□□ 2.08
RETREG1-204ENST00000509048 FLT1P17948 1338 aa28.04■■■□□ 2.08
RETREG1-204ENST00000509048 PDE3AQ14432 1141 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms