RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 CYB5R4Q7L1T6 521 aa12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 RAB11FIP4Q86YS3 637 aa12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 SDR42E1Q8WUS8 393 aa12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 ZNF274Q96GC6 653 aaPredicted RBP12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 ZMYM6O95789 1325 aa12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 IRS2Q9Y4H2 1338 aa12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 B4E1Z4 1266 aa12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 CDC25BP30305 580 aa12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 TDO2P48775 406 aa12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 ALX1Q15699 326 aa12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 BICD2Q8TD16 824 aa12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 ZNF396Q96N95 335 aaPredicted RBP12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 TACC3Q9Y6A5 838 aa12.83□□□□□ -0.36
SH3RF1-203ENST00000508685 KLF18A0A0U1RQI7 1052 aa12.82□□□□□ -0.36
SH3RF1-203ENST00000508685 EVCP57679 992 aa12.82□□□□□ -0.36
SH3RF1-203ENST00000508685 ST5P78524 1137 aa12.82□□□□□ -0.36
SH3RF1-203ENST00000508685 CRY2Q49AN0 593 aa12.82□□□□□ -0.36
SH3RF1-203ENST00000508685 ANO6Q4KMQ2 910 aa12.82□□□□□ -0.36
SH3RF1-203ENST00000508685 RPGRQ92834 1020 aaKnown RBP12.82□□□□□ -0.36
SH3RF1-203ENST00000508685 GPR101Q96P66 508 aaPredicted RBP12.82□□□□□ -0.36
SH3RF1-203ENST00000508685 CBX8Q9HC52 389 aa12.82□□□□□ -0.36
SH3RF1-203ENST00000508685 TFIP11Q9UBB9 837 aaKnown RBP12.82□□□□□ -0.36
SH3RF1-203ENST00000508685 RCOR1Q9UKL0 485 aa12.82□□□□□ -0.36
SH3RF1-203ENST00000508685 SALL1Q9NSC2 1324 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 GOLGA8BA8MQT2 603 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 POLRMTO00411 1230 aaKnown RBP12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 AP5Z1O43299 807 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 NEMFO60524 1076 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 PRDX5P30044 214 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 FOSBP53539 338 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 CAMK4Q16566 473 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 PLA2G4DQ86XP0 818 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 STK11IPQ8N1F8 1099 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 RGS22Q8NE09 1264 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 RIOK1Q9BRS2 568 aaKnown RBP12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 HPS5Q9UPZ3 1129 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 MYH13Q9UKX3 1938 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 MAGEB6P1A0A0J9YX57 407 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 SEMA3EO15041 775 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 GNAT2P19087 354 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 ZNF165P49910 485 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 ZNF75DP51815 510 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 DYNLL1P63167 89 aaKnown RBP12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 NACAP1Q9BZK3 213 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 SENP2Q9HC62 589 aa12.81□□□□□ -0.36
SH3RF1-203ENST00000508685 WDR19Q8NEZ3 1342 aa12.8□□□□□ -0.36
SH3RF1-203ENST00000508685 SMIM22K7EJ46 135 aa12.8□□□□□ -0.36
SH3RF1-203ENST00000508685 MECOMQ03112 1051 aa12.8□□□□□ -0.36
SH3RF1-203ENST00000508685 SARM1Q6SZW1 724 aa12.8□□□□□ -0.36
SH3RF1-203ENST00000508685 NSUN4Q96CB9 384 aaKnown RBP12.8□□□□□ -0.36
SH3RF1-203ENST00000508685 PGBD1Q96JS3 809 aa12.8□□□□□ -0.36
SH3RF1-203ENST00000508685 CCDC94Q9BW85 323 aaPredicted RBP12.8□□□□□ -0.36
SH3RF1-203ENST00000508685 TRIM5Q9C035 493 aa12.8□□□□□ -0.36
SH3RF1-203ENST00000508685 KCNF1Q9H3M0 494 aa12.8□□□□□ -0.36
SH3RF1-203ENST00000508685 ANGEL1Q9UNK9 670 aaKnown RBP12.8□□□□□ -0.36
SH3RF1-203ENST00000508685 TIAM2Q8IVF5 1701 aa12.8□□□□□ -0.36
SH3RF1-203ENST00000508685 XDHP47989 1333 aa12.8□□□□□ -0.36
SH3RF1-203ENST00000508685 GOLGA6L19H0YKK7 550 aa12.79□□□□□ -0.36
SH3RF1-203ENST00000508685 AKNAD1Q5T1N1 836 aa12.79□□□□□ -0.36
SH3RF1-203ENST00000508685 LUZP1Q86V48 1076 aa12.79□□□□□ -0.36
SH3RF1-203ENST00000508685 DRC7Q8IY82 874 aa12.79□□□□□ -0.36
SH3RF1-203ENST00000508685 SH2B2O14492 632 aaPredicted RBP12.79□□□□□ -0.36
SH3RF1-203ENST00000508685 FDPSP14324 419 aaKnown RBP12.79□□□□□ -0.36
SH3RF1-203ENST00000508685 RXRAP19793 462 aa12.79□□□□□ -0.36
SH3RF1-203ENST00000508685 GPSM2P81274 684 aa12.79□□□□□ -0.36
SH3RF1-203ENST00000508685 SYCP1Q15431 976 aa12.79□□□□□ -0.36
SH3RF1-203ENST00000508685 CKAP2LQ8IYA6 745 aa12.79□□□□□ -0.36
SH3RF1-203ENST00000508685 SPC24Q8NBT2 197 aa12.79□□□□□ -0.36
SH3RF1-203ENST00000508685 ZSWIM5Q9P217 1185 aa12.79□□□□□ -0.36
SH3RF1-203ENST00000508685 CHD4Q14839 1912 aa12.79□□□□□ -0.36
SH3RF1-203ENST00000508685 PDS5AQ29RF7 1337 aaKnown RBP12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 NR1I2O75469 434 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 DHX8Q14562 1220 aaKnown RBP12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 STX1AQ16623 288 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 RRP12Q5JTH9 1297 aaKnown RBP12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 CCDC73Q6ZRK6 1079 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 MFSD6Q6ZSS7 791 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 COL23A1Q86Y22 540 aaPredicted RBP12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 PDGFDQ9GZP0 370 aaPredicted RBP12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 TOMM22Q9NS69 142 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 MINDY4BA8MYZ0 360 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 GUCY1B3Q02153 619 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 PPARAQ07869 468 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 CCDC186Q7Z3E2 898 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 MPNDQ8N594 471 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 IGDCC4Q8TDY8 1250 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 STAG1Q8WVM7 1258 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 MRFAP1L1Q96HT8 127 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 ZKSCAN3Q9BRR0 538 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 LY9Q9HBG7 655 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 AATFQ9NY61 560 aaKnown RBP eCLIP12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 PYCARDQ9ULZ3 195 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 LEMD3Q9Y2U8 911 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 PAXBP1Q9Y5B6 917 aa12.78□□□□□ -0.36
SH3RF1-203ENST00000508685 CYP2D7A0A087X1C5 515 aa12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 DHX16O60231 1041 aaKnown RBP12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 UFL1O94874 794 aa12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 PTGS1P23219 599 aa12.77□□□□□ -0.37
SH3RF1-203ENST00000508685 ADD1P35611 737 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms