RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 BIN2Q9UBW5 565 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-223ENST00000508249 HDAC5Q9UQL6 1122 aa11.54□□□□□ -0.56
UBE2D3-223ENST00000508249 PFASO15067 1338 aa11.54□□□□□ -0.56
UBE2D3-223ENST00000508249 RFX7Q2KHR2 1363 aa11.54□□□□□ -0.56
UBE2D3-223ENST00000508249 REV3LO60673 3130 aa11.53□□□□□ -0.56
UBE2D3-223ENST00000508249 GRM8O00222 908 aa11.53□□□□□ -0.56
UBE2D3-223ENST00000508249 IPO8O15397 1037 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-223ENST00000508249 SYN1P17600 705 aa11.53□□□□□ -0.56
UBE2D3-223ENST00000508249 HIBADHP31937 336 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-223ENST00000508249 RARSP54136 660 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-223ENST00000508249 UBE4AQ14139 1066 aa11.53□□□□□ -0.56
UBE2D3-223ENST00000508249 FBXO33Q7Z6M2 555 aa11.53□□□□□ -0.56
UBE2D3-223ENST00000508249 PARK7Q99497 189 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-223ENST00000508249 ZNF341Q9BYN7 854 aa11.53□□□□□ -0.56
UBE2D3-223ENST00000508249 PUS3Q9BZE2 481 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-223ENST00000508249 IQSEC3Q9UPP2 1182 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-223ENST00000508249 A0A0G2JLL6 359 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-223ENST00000508249 F6X3S4 739 aa11.52□□□□□ -0.57
UBE2D3-223ENST00000508249 POTEB2H3BUK9 544 aa11.52□□□□□ -0.57
UBE2D3-223ENST00000508249 PLIN1O60240 522 aa11.52□□□□□ -0.57
UBE2D3-223ENST00000508249 TRIM32Q13049 653 aa11.52□□□□□ -0.57
UBE2D3-223ENST00000508249 SLC4A10Q6U841 1118 aa11.52□□□□□ -0.57
UBE2D3-223ENST00000508249 LMBR1LQ6UX01 489 aa11.52□□□□□ -0.57
UBE2D3-223ENST00000508249 PRRT2Q7Z6L0 340 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-223ENST00000508249 VGLL2Q8N8G2 317 aa11.52□□□□□ -0.57
UBE2D3-223ENST00000508249 KAZALD1Q96I82 304 aa11.52□□□□□ -0.57
UBE2D3-223ENST00000508249 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.52□□□□□ -0.578e-9■■□□□ 13.6
UBE2D3-223ENST00000508249 C9orf78Q9NZ63 289 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-223ENST00000508249 RPTORQ8N122 1335 aa11.52□□□□□ -0.57
UBE2D3-223ENST00000508249 MYH2Q9UKX2 1941 aa11.52□□□□□ -0.57
UBE2D3-223ENST00000508249 SIPA1L1O43166 1804 aa11.51□□□□□ -0.57
UBE2D3-223ENST00000508249 TFRCP02786 760 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-223ENST00000508249 NFIAQ12857 509 aa11.51□□□□□ -0.57
UBE2D3-223ENST00000508249 DCAF15Q66K64 600 aa11.51□□□□□ -0.57
UBE2D3-223ENST00000508249 LDHAL6AQ6ZMR3 332 aa11.51□□□□□ -0.57
UBE2D3-223ENST00000508249 NECAB2Q7Z6G3 386 aa11.51□□□□□ -0.57
UBE2D3-223ENST00000508249 TEKT1Q969V4 418 aa11.51□□□□□ -0.57
UBE2D3-223ENST00000508249 UTYO14607 1347 aa11.51□□□□□ -0.57
UBE2D3-223ENST00000508249 PHF20L1A8MW92 1017 aa11.5□□□□□ -0.57
UBE2D3-223ENST00000508249 SLURP2P0DP57 97 aa11.5□□□□□ -0.57
UBE2D3-223ENST00000508249 CAPN2P17655 700 aa11.5□□□□□ -0.57
UBE2D3-223ENST00000508249 ANKLE1Q8NAG6 615 aa11.5□□□□□ -0.57
UBE2D3-223ENST00000508249 MRIQ9BWK5 157 aa11.5□□□□□ -0.57
UBE2D3-223ENST00000508249 FAM198AQ9UFP1 575 aa11.5□□□□□ -0.57
UBE2D3-223ENST00000508249 CXCL11O14625 94 aa11.49□□□□□ -0.57
UBE2D3-223ENST00000508249 TNPO2O14787 897 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-223ENST00000508249 CHAF1AQ13111 956 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-223ENST00000508249 ZFPM1Q8IX07 1006 aa11.49□□□□□ -0.57
UBE2D3-223ENST00000508249 FAM151AQ8WW52 585 aa11.49□□□□□ -0.57
UBE2D3-223ENST00000508249 PRDM6Q9NQX0 595 aa11.49□□□□□ -0.57
UBE2D3-223ENST00000508249 CNNM1Q9NRU3 951 aa11.49□□□□□ -0.57
UBE2D3-223ENST00000508249 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-223ENST00000508249 NOB1Q9ULX3 412 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-223ENST00000508249 CHMP3Q9Y3E7 222 aa11.49□□□□□ -0.57
UBE2D3-223ENST00000508249 COL6A1P12109 1028 aa11.48□□□□□ -0.57
UBE2D3-223ENST00000508249 FAM109BQ6ICB4 259 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-223ENST00000508249 HHIPL2Q6UWX4 724 aa11.48□□□□□ -0.57
UBE2D3-223ENST00000508249 HOOK2Q96ED9 719 aa11.48□□□□□ -0.57
UBE2D3-223ENST00000508249 OGDHLQ9ULD0 1010 aa11.48□□□□□ -0.57
UBE2D3-223ENST00000508249 SLC45A1Q9Y2W3 748 aa11.48□□□□□ -0.57
UBE2D3-223ENST00000508249 DAGLAQ9Y4D2 1042 aa11.48□□□□□ -0.57
UBE2D3-223ENST00000508249 AFG3L2Q9Y4W6 797 aa11.48□□□□□ -0.57
UBE2D3-223ENST00000508249 RLFQ13129 1914 aa11.48□□□□□ -0.57
UBE2D3-223ENST00000508249 CHD9Q3L8U1 2897 aa11.48□□□□□ -0.57
UBE2D3-223ENST00000508249 XIRP2A4UGR9 3374 aa11.48□□□□□ -0.57
UBE2D3-223ENST00000508249 HMGCRP04035 888 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 PTPRAP18433 802 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 TCP10Q12799 353 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 CCDC57Q2TAC2 916 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 LRRC24Q50LG9 513 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 MAP3K21Q5TCX8 1036 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 CDC42EP5Q6NZY7 148 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 ATF7IPQ6VMQ6 1270 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 SH3BP5LQ7L8J4 393 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 TBC1D22AQ8WUA7 517 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 UBE2OQ9C0C9 1292 aaKnown RBP11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 NBPF3Q9H094 633 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 C11orf49Q9H6J7 331 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 TMOD2Q9NZR1 351 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 GJD2Q9UKL4 321 aa11.47□□□□□ -0.57
UBE2D3-223ENST00000508249 MS4A1P11836 297 aa11.46□□□□□ -0.57
UBE2D3-223ENST00000508249 DIXDC1Q155Q3 683 aa11.46□□□□□ -0.57
UBE2D3-223ENST00000508249 FAM110CQ1W6H9 321 aa11.46□□□□□ -0.57
UBE2D3-223ENST00000508249 RABL6Q3YEC7 729 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-223ENST00000508249 TREML2Q5T2D2 321 aa11.46□□□□□ -0.57
UBE2D3-223ENST00000508249 ZKSCAN2Q63HK3 967 aa11.46□□□□□ -0.57
UBE2D3-223ENST00000508249 CCDC84Q86UT8 332 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-223ENST00000508249 SCYL3Q8IZE3 742 aa11.46□□□□□ -0.57
UBE2D3-223ENST00000508249 ANKRD13CQ8N6S4 541 aa11.46□□□□□ -0.57
UBE2D3-223ENST00000508249 TRIB2Q92519 343 aa11.46□□□□□ -0.57
UBE2D3-223ENST00000508249 SUCLG2Q96I99 432 aa11.46□□□□□ -0.57
UBE2D3-223ENST00000508249 SUGT1Q9Y2Z0 365 aa11.46□□□□□ -0.57
UBE2D3-223ENST00000508249 CDK5RAP2Q96SN8 1893 aa11.45□□□□□ -0.58
UBE2D3-223ENST00000508249 GNAI3P08754 354 aa11.45□□□□□ -0.58
UBE2D3-223ENST00000508249 FGFR2P21802 821 aa11.45□□□□□ -0.58
UBE2D3-223ENST00000508249 MAP3K10Q02779 954 aa11.45□□□□□ -0.58
UBE2D3-223ENST00000508249 LRRC26Q2I0M4 334 aa11.45□□□□□ -0.58
UBE2D3-223ENST00000508249 TAF7LQ5H9L4 462 aa11.45□□□□□ -0.58
UBE2D3-223ENST00000508249 FAM161BQ96MY7 647 aa11.45□□□□□ -0.58
UBE2D3-223ENST00000508249 ZHX2Q9Y6X8 837 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms