RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CLEC4GQ6UXB4 293 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 FMR1NBQ8N0W7 255 aaPredicted RBP16.84■□□□□ 0.29
DDX41-208ENST00000507955 WDR19Q8NEZ3 1342 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 KIAA1524Q8TCG1 905 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 NUP133Q8WUM0 1156 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 MRPS27Q92552 414 aaKnown RBP16.84■□□□□ 0.29
DDX41-208ENST00000507955 TMEM87BQ96K49 555 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 UBAP1LF5GYI3 381 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 TOM1O60784 492 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 ADALQ6DHV7 355 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 TXNRD3Q86VQ6 643 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 SDF4Q9BRK5 362 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 BSDC1Q9NW68 430 aaPredicted RBP16.84■□□□□ 0.29
DDX41-208ENST00000507955 KCNJ14Q9UNX9 436 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 ARAP2Q8WZ64 1704 aa16.84■□□□□ 0.29
DDX41-208ENST00000507955 BIN1O00499 593 aa16.83■□□□□ 0.29
DDX41-208ENST00000507955 ANO1Q5XXA6 986 aa16.83■□□□□ 0.29
DDX41-208ENST00000507955 DRC7Q8IY82 874 aa16.83■□□□□ 0.29
DDX41-208ENST00000507955 hCG_1642624A0A1W2PR95 340 aa16.83■□□□□ 0.28
DDX41-208ENST00000507955 PPARAQ07869 468 aa16.83■□□□□ 0.28
DDX41-208ENST00000507955 LRMPQ12912 555 aa16.83■□□□□ 0.28
DDX41-208ENST00000507955 GNL2Q13823 731 aaKnown RBP16.83■□□□□ 0.28
DDX41-208ENST00000507955 SF3B3Q15393 1217 aaKnown RBP16.83■□□□□ 0.28
DDX41-208ENST00000507955 SGMS1Q86VZ5 419 aa16.83■□□□□ 0.28
DDX41-208ENST00000507955 NBPF5PQ86XG9 351 aaPredicted RBP16.83■□□□□ 0.28
DDX41-208ENST00000507955 ZNF710Q8N1W2 664 aa16.83■□□□□ 0.28
DDX41-208ENST00000507955 KLHL34Q8N239 644 aa16.83■□□□□ 0.28
DDX41-208ENST00000507955 NACAP1Q9BZK3 213 aa16.83■□□□□ 0.28
DDX41-208ENST00000507955 RTL9Q8NET4 1388 aa16.83■□□□□ 0.28
DDX41-208ENST00000507955 MROH7-TTC4A0A0A0MT08 1334 aa16.83■□□□□ 0.28
DDX41-208ENST00000507955 MAGEB6P1A0A0J9YX57 407 aa16.83■□□□□ 0.28
DDX41-208ENST00000507955 IQCB1Q15051 598 aa16.83■□□□□ 0.28
DDX41-208ENST00000507955 CLIC6Q96NY7 704 aa16.83■□□□□ 0.28
DDX41-208ENST00000507955 POLR3EQ9NVU0 708 aa16.83■□□□□ 0.28
DDX41-208ENST00000507955 ZNF804BA4D1E1 1349 aa16.82■□□□□ 0.28
DDX41-208ENST00000507955 DOCK2Q92608 1830 aa16.82■□□□□ 0.28
DDX41-208ENST00000507955 CHAF1AQ13111 956 aaPredicted RBP16.82■□□□□ 0.28
DDX41-208ENST00000507955 MAP7D2Q96T17 732 aa16.82■□□□□ 0.28
DDX41-208ENST00000507955 SETDB2Q96T68 719 aa16.82■□□□□ 0.28
DDX41-208ENST00000507955 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
DDX41-208ENST00000507955 SPECC1Q5M775 1068 aa16.82■□□□□ 0.28
DDX41-208ENST00000507955 AXDND1Q5T1B0 1012 aaPredicted RBP16.82■□□□□ 0.28
DDX41-208ENST00000507955 ATL3Q6DD88 541 aa16.82■□□□□ 0.28
DDX41-208ENST00000507955 CCDC186Q7Z3E2 898 aa16.82■□□□□ 0.28
DDX41-208ENST00000507955 CHMP4CQ96CF2 233 aa16.82■□□□□ 0.28
DDX41-208ENST00000507955 PRIMPOLQ96LW4 560 aa16.82■□□□□ 0.28
DDX41-208ENST00000507955 RIOK1Q9BRS2 568 aaKnown RBP16.82■□□□□ 0.28
DDX41-208ENST00000507955 PNPLA7Q6ZV29 1317 aa16.81■□□□□ 0.28
DDX41-208ENST00000507955 RREB1Q92766 1687 aa16.81■□□□□ 0.28
DDX41-208ENST00000507955 RPS8P62241 208 aaKnown RBP16.81■□□□□ 0.28
DDX41-208ENST00000507955 WTAPQ15007 396 aa16.81■□□□□ 0.28
DDX41-208ENST00000507955 BRAPQ7Z569 592 aa16.81■□□□□ 0.28
DDX41-208ENST00000507955 TDRD7Q8NHU6 1098 aaKnown RBP16.81■□□□□ 0.28
DDX41-208ENST00000507955 STAG1Q8WVM7 1258 aa16.81■□□□□ 0.28
DDX41-208ENST00000507955 CCNL1Q9UK58 526 aaPredicted RBP16.81■□□□□ 0.28
DDX41-208ENST00000507955 BTBD18B2RXH4 712 aa16.81■□□□□ 0.28
DDX41-208ENST00000507955 LIFRP42702 1097 aa16.81■□□□□ 0.28
DDX41-208ENST00000507955 ARHGEF1Q92888 912 aaKnown RBP16.81■□□□□ 0.28
DDX41-208ENST00000507955 KRT23Q9C075 422 aa16.81■□□□□ 0.28
DDX41-208ENST00000507955 COL5A3P25940 1745 aaPredicted RBP16.81■□□□□ 0.28
DDX41-208ENST00000507955 ZPR1O75312 459 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 PRDX5P30044 214 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 ZNF75DP51815 510 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 UBE4AQ14139 1066 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 VPS72Q15906 364 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 KCNG4Q8TDN1 519 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 NPHP1O15259 732 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 CDKL5O76039 1030 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 ZNF202O95125 648 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 PFKFB1P16118 471 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 ATP2B1P20020 1258 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 GTF2F1P35269 517 aaKnown RBP eCLIP16.8■□□□□ 0.28
DDX41-208ENST00000507955 SSRP1Q08945 709 aaKnown RBP16.8■□□□□ 0.28
DDX41-208ENST00000507955 CPLX2Q6PUV4 134 aaKnown RBP16.8■□□□□ 0.28
DDX41-208ENST00000507955 NLRP3Q96P20 1036 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 GPR101Q96P66 508 aaPredicted RBP16.8■□□□□ 0.28
DDX41-208ENST00000507955 CNNM2Q9H8M5 875 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 GNL3LQ9NVN8 582 aaKnown RBP16.8■□□□□ 0.28
DDX41-208ENST00000507955 AATFQ9NY61 560 aaKnown RBP eCLIP16.8■□□□□ 0.28
DDX41-208ENST00000507955 NARFQ9UHQ1 456 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 USP21Q9UK80 565 aa16.8■□□□□ 0.28
DDX41-208ENST00000507955 CICQ96RK0 1608 aaPredicted RBP16.8■□□□□ 0.28
DDX41-208ENST00000507955 GNAT2P19087 354 aa16.79■□□□□ 0.28
DDX41-208ENST00000507955 ARID5BQ14865 1188 aa16.79■□□□□ 0.28
DDX41-208ENST00000507955 STX1AQ16623 288 aa16.79■□□□□ 0.28
DDX41-208ENST00000507955 DPCR1Q3MIW9 517 aa16.79■□□□□ 0.28
DDX41-208ENST00000507955 CCDC144BQ3MJ40 725 aa16.79■□□□□ 0.28
DDX41-208ENST00000507955 DHX40Q8IX18 779 aaKnown RBP16.79■□□□□ 0.28
DDX41-208ENST00000507955 CHD4Q14839 1912 aa16.79■□□□□ 0.28
DDX41-208ENST00000507955 BAZ2AQ9UIF9 1905 aaKnown RBP16.79■□□□□ 0.28
DDX41-208ENST00000507955 NMT2O60551 498 aa16.79■□□□□ 0.28
DDX41-208ENST00000507955 YEATS4O95619 227 aa16.79■□□□□ 0.28
DDX41-208ENST00000507955 NR5A1Q13285 461 aa16.79■□□□□ 0.28
DDX41-208ENST00000507955 PLA2G4DQ86XP0 818 aa16.79■□□□□ 0.28
DDX41-208ENST00000507955 AOPEPQ8N6M6 819 aa16.79■□□□□ 0.28
DDX41-208ENST00000507955 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.79■□□□□ 0.28
DDX41-208ENST00000507955 GOLGA6L19H0YKK7 550 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 RPS6KA4O75676 772 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 MECOMQ03112 1051 aa16.78■□□□□ 0.28
DDX41-208ENST00000507955 SLC39A14Q15043 492 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms