RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 SCYL3Q8IZE3 742 aa17.49■□□□□ 0.39
DDR1-260ENST00000507533 ANKRD13CQ8N6S4 541 aa17.49■□□□□ 0.39
DDR1-260ENST00000507533 KAZALD1Q96I82 304 aa17.49■□□□□ 0.39
DDR1-260ENST00000507533 C11orf49Q9H6J7 331 aa17.49■□□□□ 0.39
DDR1-260ENST00000507533 FAM198AQ9UFP1 575 aa17.49■□□□□ 0.39
DDR1-260ENST00000507533 DAGLAQ9Y4D2 1042 aa17.49■□□□□ 0.39
DDR1-260ENST00000507533 MGAMO43451 1857 aa17.49■□□□□ 0.39
DDR1-260ENST00000507533 PHF20L1A8MW92 1017 aa17.48■□□□□ 0.39
DDR1-260ENST00000507533 ZFPM1Q8IX07 1006 aa17.48■□□□□ 0.39
DDR1-260ENST00000507533 VGLL2Q8N8G2 317 aa17.48■□□□□ 0.39
DDR1-260ENST00000507533 USP40Q9NVE5 1235 aa17.48■□□□□ 0.39
DDR1-260ENST00000507533 IL16Q14005 1332 aa17.47■□□□□ 0.39
DDR1-260ENST00000507533 ALPK3Q96L96 1907 aa17.47■□□□□ 0.39
DDR1-260ENST00000507533 ALDH1L1O75891 902 aa17.47■□□□□ 0.39
DDR1-260ENST00000507533 HMGCRP04035 888 aa17.47■□□□□ 0.39
DDR1-260ENST00000507533 DIXDC1Q155Q3 683 aa17.47■□□□□ 0.39
DDR1-260ENST00000507533 WDR66Q8TBY9 1149 aa17.47■□□□□ 0.39
DDR1-260ENST00000507533 PRKRIP1Q9H875 184 aaPredicted RBP17.47■□□□□ 0.39
DDR1-260ENST00000507533 HMX1Q9NP08 348 aaPredicted RBP17.47■□□□□ 0.39
DDR1-260ENST00000507533 RPTORQ8N122 1335 aa17.47■□□□□ 0.39
DDR1-260ENST00000507533 FANCIQ9NVI1 1328 aa17.47■□□□□ 0.39
DDR1-260ENST00000507533 IFIT1P09914 478 aaKnown RBP17.46■□□□□ 0.39
DDR1-260ENST00000507533 SLC4A10Q6U841 1118 aa17.46■□□□□ 0.39
DDR1-260ENST00000507533 SRCIN1Q9C0H9 1055 aa17.46■□□□□ 0.39
DDR1-260ENST00000507533 TRIM75PA6NK02 468 aa17.45■□□□□ 0.38
DDR1-260ENST00000507533 TRIM32Q13049 653 aa17.45■□□□□ 0.38
DDR1-260ENST00000507533 FAM110CQ1W6H9 321 aa17.45■□□□□ 0.38
DDR1-260ENST00000507533 AGTPBP1Q9UPW5 1226 aa17.45■□□□□ 0.38
DDR1-260ENST00000507533 LRRFIP2Q9Y608 721 aaKnown RBP17.45■□□□□ 0.38
DDR1-260ENST00000507533 KIF16BQ96L93 1317 aa17.45■□□□□ 0.38
DDR1-260ENST00000507533 ATRNL1Q5VV63 1379 aa17.44■□□□□ 0.38
DDR1-260ENST00000507533 NBPF7P0C2Y1 421 aaPredicted RBP17.44■□□□□ 0.38
DDR1-260ENST00000507533 EXOSC9Q06265 439 aaKnown RBP17.44■□□□□ 0.38
DDR1-260ENST00000507533 PUM3Q15397 648 aaKnown RBP17.44■□□□□ 0.38
DDR1-260ENST00000507533 GUCD1Q96NT3 240 aa17.44■□□□□ 0.38
DDR1-260ENST00000507533 BICC1Q9H694 974 aaKnown RBP17.44■□□□□ 0.38
DDR1-260ENST00000507533 PNMA3Q9UL41 463 aa17.44■□□□□ 0.38
DDR1-260ENST00000507533 OGDHLQ9ULD0 1010 aa17.44■□□□□ 0.38
DDR1-260ENST00000507533 FGFR2P21802 821 aa17.43■□□□□ 0.38
DDR1-260ENST00000507533 RABL6Q3YEC7 729 aaPredicted RBP17.43■□□□□ 0.38
DDR1-260ENST00000507533 TREML2Q5T2D2 321 aa17.43■□□□□ 0.38
DDR1-260ENST00000507533 KLHDC4Q8TBB5 520 aa17.43■□□□□ 0.38
DDR1-260ENST00000507533 SPINK5Q9NQ38 1064 aaPredicted RBP17.43■□□□□ 0.38
DDR1-260ENST00000507533 GJD2Q9UKL4 321 aa17.43■□□□□ 0.38
DDR1-260ENST00000507533 POTEB2H3BUK9 544 aa17.42■□□□□ 0.38
DDR1-260ENST00000507533 CTNND1O60716 968 aaKnown RBP17.42■□□□□ 0.38
DDR1-260ENST00000507533 LDHBP07195 334 aaKnown RBP17.42■□□□□ 0.38
DDR1-260ENST00000507533 PRDX5P30044 214 aa17.42■□□□□ 0.38
DDR1-260ENST00000507533 RGS3P49796 1198 aa17.42■□□□□ 0.38
DDR1-260ENST00000507533 FAM109BQ6ICB4 259 aaPredicted RBP17.42■□□□□ 0.38
DDR1-260ENST00000507533 ZSCAN29Q8IWY8 852 aaPredicted RBP17.42■□□□□ 0.38
DDR1-260ENST00000507533 PFASO15067 1338 aa17.42■□□□□ 0.38
DDR1-260ENST00000507533 ENTPD3O75355 529 aa17.41■□□□□ 0.38
DDR1-260ENST00000507533 SLURP2P0DP57 97 aa17.41■□□□□ 0.38
DDR1-260ENST00000507533 MDM2Q00987 491 aaPredicted RBP17.41■□□□□ 0.38
DDR1-260ENST00000507533 MAP3K10Q02779 954 aa17.41■□□□□ 0.38
DDR1-260ENST00000507533 SH3BP5LQ7L8J4 393 aa17.41■□□□□ 0.38
DDR1-260ENST00000507533 CCDC84Q86UT8 332 aaPredicted RBP17.41■□□□□ 0.38
DDR1-260ENST00000507533 ANKRD44Q8N8A2 993 aa17.41■□□□□ 0.38
DDR1-260ENST00000507533 FAM161BQ96MY7 647 aa17.41■□□□□ 0.38
DDR1-260ENST00000507533 IDI2Q9BXS1 227 aa17.41■□□□□ 0.38
DDR1-260ENST00000507533 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.41■□□□□ 0.38
DDR1-260ENST00000507533 AK9Q5TCS8 1911 aa17.41■□□□□ 0.38
DDR1-260ENST00000507533 SLC5A1P13866 664 aa17.4■□□□□ 0.38
DDR1-260ENST00000507533 GCLCP48506 637 aaPredicted RBP17.4■□□□□ 0.38
DDR1-260ENST00000507533 UTYO14607 1347 aa17.4■□□□□ 0.38
DDR1-260ENST00000507533 DDTLA6NHG4 134 aaPredicted RBP17.39■□□□□ 0.37
DDR1-260ENST00000507533 PROCA1Q8NCQ7 364 aaPredicted RBP17.39■□□□□ 0.37
DDR1-260ENST00000507533 TRIB2Q92519 343 aa17.39■□□□□ 0.37
DDR1-260ENST00000507533 LPIN2Q92539 896 aa17.39■□□□□ 0.37
DDR1-260ENST00000507533 PRDM6Q9NQX0 595 aa17.39■□□□□ 0.37
DDR1-260ENST00000507533 SPTBN5Q9NRC6 3674 aaKnown RBP17.39■□□□□ 0.37
DDR1-260ENST00000507533 CACNA1FO60840 1977 aa17.39■□□□□ 0.37
DDR1-260ENST00000507533 DDX60LQ5H9U9 1706 aaKnown RBP17.38■□□□□ 0.37
DDR1-260ENST00000507533 VCANP13611 3396 aa17.38■□□□□ 0.37
DDR1-260ENST00000507533 PRKAR2AP13861 404 aaKnown RBP17.38■□□□□ 0.37
DDR1-260ENST00000507533 CYP2B6P20813 491 aa17.38■□□□□ 0.37
DDR1-260ENST00000507533 LRRC26Q2I0M4 334 aa17.38■□□□□ 0.37
DDR1-260ENST00000507533 MAP3K21Q5TCX8 1036 aa17.38■□□□□ 0.37
DDR1-260ENST00000507533 COL6A1P12109 1028 aa17.37■□□□□ 0.37
DDR1-260ENST00000507533 PABPC4Q13310 644 aaKnown RBP eCLIP17.37■□□□□ 0.37
DDR1-260ENST00000507533 SPP2Q13103 211 aa17.36■□□□□ 0.37
DDR1-260ENST00000507533 PICALMQ13492 652 aa17.36■□□□□ 0.37
DDR1-260ENST00000507533 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
DDR1-260ENST00000507533 WDR63Q8IWG1 891 aa17.36■□□□□ 0.37
DDR1-260ENST00000507533 ASCC2Q9H1I8 757 aaPredicted RBP17.36■□□□□ 0.37
DDR1-260ENST00000507533 GNL3LQ9NVN8 582 aaKnown RBP17.36■□□□□ 0.37
DDR1-260ENST00000507533 DOCK3Q8IZD9 2030 aa17.35■□□□□ 0.37
DDR1-260ENST00000507533 LAMA2P24043 3122 aaKnown RBP17.35■□□□□ 0.37
DDR1-260ENST00000507533 EYA2O00167 538 aa17.35■□□□□ 0.37
DDR1-260ENST00000507533 ZNF697Q5TEC3 545 aa17.35■□□□□ 0.37
DDR1-260ENST00000507533 ZNF280CQ8ND82 737 aa17.35■□□□□ 0.37
DDR1-260ENST00000507533 LBHD1Q9BQE6 289 aaPredicted RBP17.35■□□□□ 0.37
DDR1-260ENST00000507533 DDX4Q9NQI0 724 aaKnown RBP17.35■□□□□ 0.37
DDR1-260ENST00000507533 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
DDR1-260ENST00000507533 SALL1Q9NSC2 1324 aa17.35■□□□□ 0.37
DDR1-260ENST00000507533 GAKO14976 1311 aa17.34■□□□□ 0.37
DDR1-260ENST00000507533 HMGCS2P54868 508 aa17.34■□□□□ 0.37
DDR1-260ENST00000507533 RFX7Q2KHR2 1363 aa17.34■□□□□ 0.37
DDR1-260ENST00000507533 NUDT12Q9BQG2 462 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms