RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 SNAP23O00161 211 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 PPARAQ07869 468 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 ODF2Q5BJF6 829 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 ZFYVE27Q5T4F4 411 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 ANKRD35Q8N283 1001 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 UPF1Q92900 1129 aaKnown RBP eCLIP10.88□□□□□ -0.67
NEK1-203ENST00000507142 SPATA32Q96LK8 384 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 IBTKQ9P2D0 1353 aaPredicted RBP10.88□□□□□ -0.67
NEK1-203ENST00000507142 NRKQ7Z2Y5 1582 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 ALAS1P13196 640 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 ZNF157P51786 506 aaPredicted RBP10.88□□□□□ -0.67
NEK1-203ENST00000507142 RASSF7Q02833 373 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 TBC1D16Q8TBP0 767 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 ZNF34Q8IZ26 560 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 CALML4Q96GE6 196 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 FAM227BQ96M60 508 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 WRNIP1Q96S55 665 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 RRAGCQ9HB90 399 aa10.88□□□□□ -0.67
NEK1-203ENST00000507142 ZBTB12Q9Y330 459 aaPredicted RBP10.88□□□□□ -0.67
NEK1-203ENST00000507142 GMPSP49915 693 aaPredicted RBP10.87□□□□□ -0.67
NEK1-203ENST00000507142 SYCP1Q15431 976 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 ALG1Q9BT22 464 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 PALD1Q9ULE6 856 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 DYNLL1P63167 89 aaKnown RBP10.87□□□□□ -0.67
NEK1-203ENST00000507142 ZNF827Q17R98 1081 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 SKOR2Q2VWA4 1001 aaPredicted RBP10.87□□□□□ -0.67
NEK1-203ENST00000507142 FAM47CQ5HY64 1035 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 CREB3L3Q68CJ9 461 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 GNA11P29992 359 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 KCTD2Q14681 263 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 RBM28Q9NW13 759 aaKnown RBP10.87□□□□□ -0.67
NEK1-203ENST00000507142 PHLPP1O60346 1717 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 CFBP00751 764 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 LRRC47Q8N1G4 583 aaKnown RBP10.87□□□□□ -0.67
NEK1-203ENST00000507142 DHX36Q9H2U1 1008 aaKnown RBP10.87□□□□□ -0.67
NEK1-203ENST00000507142 KIF1AQ12756 1690 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 ITSN1Q15811 1721 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 CELF2O95319 508 aaKnown RBP10.87□□□□□ -0.67
NEK1-203ENST00000507142 CALML3P27482 149 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 NCBP1Q09161 790 aaKnown RBP10.87□□□□□ -0.67
NEK1-203ENST00000507142 SPICE1Q8N0Z3 855 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 ZNF341Q9BYN7 854 aa10.87□□□□□ -0.67
NEK1-203ENST00000507142 ADCY9O60503 1353 aa10.86□□□□□ -0.67
NEK1-203ENST00000507142 BICD1Q96G01 975 aa10.86□□□□□ -0.67
NEK1-203ENST00000507142 PI4KBQ9UBF8 816 aa10.86□□□□□ -0.67
NEK1-203ENST00000507142 PTPN12Q05209 780 aaKnown RBP10.86□□□□□ -0.67
NEK1-203ENST00000507142 NAT10Q9H0A0 1025 aaKnown RBP10.86□□□□□ -0.67
NEK1-203ENST00000507142 GPR108Q9NPR9 543 aa10.86□□□□□ -0.67
NEK1-203ENST00000507142 PNMA3Q9UL41 463 aa10.86□□□□□ -0.67
NEK1-203ENST00000507142 CHMLP26374 656 aa10.86□□□□□ -0.67
NEK1-203ENST00000507142 DNAI2Q9GZS0 605 aa10.86□□□□□ -0.67
NEK1-203ENST00000507142 PRKAG2Q9UGJ0 569 aa10.86□□□□□ -0.67
NEK1-203ENST00000507142 VEGFAP15692 232 aaPredicted RBP10.86□□□□□ -0.67
NEK1-203ENST00000507142 MECOMQ03112 1051 aa10.86□□□□□ -0.67
NEK1-203ENST00000507142 APOBRQ0VD83 1088 aa10.86□□□□□ -0.67
NEK1-203ENST00000507142 BRPF1P55201 1214 aaPredicted RBP10.85□□□□□ -0.67
NEK1-203ENST00000507142 DRC1Q96MC2 740 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 SWAP70Q9UH65 585 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 HUNKP57058 714 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 PI16Q6UXB8 463 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 IFNL3Q8IZI9 196 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 NECAB1Q8N987 351 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 CCDC17Q96LX7 622 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 PSMD14O00487 310 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 MAP3K9P80192 1104 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 DHX32Q7L7V1 743 aaKnown RBP10.85□□□□□ -0.67
NEK1-203ENST00000507142 PTF1AQ7RTS3 328 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 NTSR2O95665 410 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 UBA7P41226 1012 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 EPHA10Q5JZY3 1008 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 HAUS7Q99871 368 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 GGA3Q9NZ52 723 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 SERPINB13Q9UIV8 391 aa10.85□□□□□ -0.67
NEK1-203ENST00000507142 ANGEL2Q5VTE6 544 aaKnown RBP10.84□□□□□ -0.67
NEK1-203ENST00000507142 SLFN13Q68D06 897 aa10.84□□□□□ -0.67
NEK1-203ENST00000507142 DBNLQ9UJU6 430 aaKnown RBP10.84□□□□□ -0.67
NEK1-203ENST00000507142 ZHX2Q9Y6X8 837 aa10.84□□□□□ -0.67
NEK1-203ENST00000507142 TMEM232C9JQI7 657 aa10.84□□□□□ -0.67
NEK1-203ENST00000507142 RASGRF1Q13972 1273 aa10.84□□□□□ -0.67
NEK1-203ENST00000507142 ATP8A2Q9NTI2 1148 aa10.84□□□□□ -0.67
NEK1-203ENST00000507142 GINS2Q9Y248 185 aa10.84□□□□□ -0.67
NEK1-203ENST00000507142 FRMPD2Q68DX3 1309 aaPredicted RBP10.84□□□□□ -0.67
NEK1-203ENST00000507142 IDEP14735 1019 aa10.84□□□□□ -0.67
NEK1-203ENST00000507142 SF3B3Q15393 1217 aaKnown RBP10.84□□□□□ -0.67
NEK1-203ENST00000507142 SMC5Q8IY18 1101 aa10.84□□□□□ -0.67
NEK1-203ENST00000507142 DHX37Q8IY37 1157 aaKnown RBP10.84□□□□□ -0.67
NEK1-203ENST00000507142 TRIM28Q13263 835 aaKnown RBP10.84□□□□□ -0.67
NEK1-203ENST00000507142 SCARF1Q14162 830 aa10.84□□□□□ -0.67
NEK1-203ENST00000507142 PDIA4P13667 645 aaKnown RBP10.84□□□□□ -0.67
NEK1-203ENST00000507142 TLR7Q9NYK1 1049 aaKnown RBP10.84□□□□□ -0.67
NEK1-203ENST00000507142 PRPF40AO75400 957 aaKnown RBP10.83□□□□□ -0.68
NEK1-203ENST00000507142 NAP1L1P55209 391 aaKnown RBP10.83□□□□□ -0.68
NEK1-203ENST00000507142 AKNAD1Q5T1N1 836 aa10.83□□□□□ -0.68
NEK1-203ENST00000507142 TNPO1Q92973 898 aaKnown RBP10.83□□□□□ -0.68
NEK1-203ENST00000507142 TMEM87BQ96K49 555 aa10.83□□□□□ -0.68
NEK1-203ENST00000507142 EPHX2P34913 555 aa10.83□□□□□ -0.68
NEK1-203ENST00000507142 SYCP3Q8IZU3 236 aa10.83□□□□□ -0.68
NEK1-203ENST00000507142 TBCAO75347 108 aaKnown RBP10.83□□□□□ -0.68
NEK1-203ENST00000507142 GJB2P29033 226 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms