RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 SOX4Q06945 474 aaPredicted RBP6.71□□□□□ -1.34
SSBP2-206ENST00000506960 PRPF40BQ6NWY9 871 aaKnown RBP6.71□□□□□ -1.34
SSBP2-206ENST00000506960 TMC7Q7Z402 723 aa6.71□□□□□ -1.34
SSBP2-206ENST00000506960 ALKBH8Q96BT7 664 aaKnown RBP6.71□□□□□ -1.34
SSBP2-206ENST00000506960 DMRTB1Q96MA1 342 aa6.71□□□□□ -1.34
SSBP2-206ENST00000506960 ADAMTS6Q9UKP5 1117 aa6.71□□□□□ -1.34
SSBP2-206ENST00000506960 ADH5P11766 374 aa6.7□□□□□ -1.34
SSBP2-206ENST00000506960 GRM2Q14416 872 aa6.7□□□□□ -1.34
SSBP2-206ENST00000506960 POU4F3Q15319 338 aa6.7□□□□□ -1.34
SSBP2-206ENST00000506960 CIAPIN1Q6FI81 312 aa6.7□□□□□ -1.34
SSBP2-206ENST00000506960 OGFOD3Q6PK18 319 aa6.7□□□□□ -1.34
SSBP2-206ENST00000506960 NETO1Q8TDF5 533 aa6.7□□□□□ -1.34
SSBP2-206ENST00000506960 EPS8L3Q8TE67 593 aaKnown RBP6.7□□□□□ -1.34
SSBP2-206ENST00000506960 TMEM238LA0A1B0GVL6 79 aa6.69□□□□□ -1.34
SSBP2-206ENST00000506960 GADD45BO75293 160 aaPredicted RBP6.69□□□□□ -1.34
SSBP2-206ENST00000506960 BRD1O95696 1058 aa6.69□□□□□ -1.34
SSBP2-206ENST00000506960 CYP11A1P05108 521 aa6.69□□□□□ -1.34
SSBP2-206ENST00000506960 C1QTNF9P0C862 333 aa6.69□□□□□ -1.34
SSBP2-206ENST00000506960 HOXA5P20719 270 aa6.69□□□□□ -1.34
SSBP2-206ENST00000506960 PTPN12Q05209 780 aaKnown RBP6.69□□□□□ -1.34
SSBP2-206ENST00000506960 SLC23A3Q6PIS1 610 aa6.69□□□□□ -1.34
SSBP2-206ENST00000506960 BIN2Q9UBW5 565 aaPredicted RBP6.69□□□□□ -1.34
SSBP2-206ENST00000506960 FAAP100Q0VG06 881 aa6.68□□□□□ -1.34
SSBP2-206ENST00000506960 PI16Q6UXB8 463 aa6.68□□□□□ -1.34
SSBP2-206ENST00000506960 DCTN4Q9UJW0 460 aa6.68□□□□□ -1.34
SSBP2-206ENST00000506960 ACTL7BQ9Y614 415 aa6.68□□□□□ -1.34
SSBP2-206ENST00000506960 NFICP08651 508 aa6.67□□□□□ -1.34
SSBP2-206ENST00000506960 CORO1BQ9BR76 489 aa6.67□□□□□ -1.34
SSBP2-206ENST00000506960 TRAK1Q9UPV9 953 aa6.67□□□□□ -1.34
SSBP2-206ENST00000506960 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.66□□□□□ -1.34
SSBP2-206ENST00000506960 DSC3Q14574 896 aa6.66□□□□□ -1.34
SSBP2-206ENST00000506960 RPS26P11Q5JNZ5 115 aaPredicted RBP6.66□□□□□ -1.34
SSBP2-206ENST00000506960 AKAP4Q5JQC9 854 aa6.66□□□□□ -1.34
SSBP2-206ENST00000506960 ANGEL2Q5VTE6 544 aaKnown RBP6.66□□□□□ -1.34
SSBP2-206ENST00000506960 DDX54Q8TDD1 881 aaKnown RBP6.66□□□□□ -1.34
SSBP2-206ENST00000506960 C20orf173Q96LM9 149 aa6.66□□□□□ -1.34
SSBP2-206ENST00000506960 FAM105AQ9NUU6 356 aa6.66□□□□□ -1.34
SSBP2-206ENST00000506960 NPIPB6E9PJ23 425 aa6.65□□□□□ -1.34
SSBP2-206ENST00000506960 TMEM253P0C7T8 217 aa6.65□□□□□ -1.34
SSBP2-206ENST00000506960 RAB6AP20340 208 aa6.65□□□□□ -1.34
SSBP2-206ENST00000506960 AFMP43652 599 aa6.65□□□□□ -1.34
SSBP2-206ENST00000506960 ZNF157P51786 506 aaPredicted RBP6.65□□□□□ -1.34
SSBP2-206ENST00000506960 AP3B2Q13367 1082 aa6.65□□□□□ -1.34
SSBP2-206ENST00000506960 HP1BP3Q5SSJ5 553 aaPredicted RBP6.65□□□□□ -1.34
SSBP2-206ENST00000506960 MPZL3Q6UWV2 235 aa6.65□□□□□ -1.34
SSBP2-206ENST00000506960 FBXO15Q8NCQ5 510 aaPredicted RBP6.65□□□□□ -1.34
SSBP2-206ENST00000506960 WDR18Q9BV38 432 aa6.65□□□□□ -1.34
SSBP2-206ENST00000506960 AP4E1Q9UPM8 1137 aa6.65□□□□□ -1.34
SSBP2-206ENST00000506960 PNMA6FA0A0J9YX94 578 aa6.64□□□□□ -1.35
SSBP2-206ENST00000506960 TREHO43280 583 aa6.64□□□□□ -1.35
SSBP2-206ENST00000506960 FOXD2O60548 495 aaPredicted RBP6.64□□□□□ -1.35
SSBP2-206ENST00000506960 SYN1P17600 705 aa6.64□□□□□ -1.35
SSBP2-206ENST00000506960 MAPK1P28482 360 aa6.64□□□□□ -1.35
SSBP2-206ENST00000506960 FCGRTP55899 365 aa6.64□□□□□ -1.35
SSBP2-206ENST00000506960 PDE3AQ14432 1141 aa6.64□□□□□ -1.35
SSBP2-206ENST00000506960 ENOX2Q16206 610 aaKnown RBP6.64□□□□□ -1.35
SSBP2-206ENST00000506960 DYMQ7RTS9 669 aa6.64□□□□□ -1.35
SSBP2-206ENST00000506960 LIN37Q96GY3 246 aaPredicted RBP6.64□□□□□ -1.35
SSBP2-206ENST00000506960 SEMA6CQ9H3T2 930 aa6.64□□□□□ -1.35
SSBP2-206ENST00000506960 GSX1Q9H4S2 264 aaPredicted RBP6.64□□□□□ -1.35
SSBP2-206ENST00000506960 CCDC86Q9H6F5 360 aaKnown RBP6.64□□□□□ -1.35
SSBP2-206ENST00000506960 ZFYVE1Q9HBF4 777 aa6.64□□□□□ -1.35
SSBP2-206ENST00000506960 RAD18Q9NS91 495 aa6.64□□□□□ -1.35
SSBP2-206ENST00000506960 AOC2O75106 756 aa6.63□□□□□ -1.35
SSBP2-206ENST00000506960 KCNA10Q16322 511 aa6.63□□□□□ -1.35
SSBP2-206ENST00000506960 HRASLS5Q96KN8 279 aa6.63□□□□□ -1.35
SSBP2-206ENST00000506960 BCO2Q9BYV7 579 aa6.63□□□□□ -1.35
SSBP2-206ENST00000506960 ACSS3Q9H6R3 686 aa6.63□□□□□ -1.35
SSBP2-206ENST00000506960 NLRP2Q9NX02 1062 aa6.63□□□□□ -1.35
SSBP2-206ENST00000506960 CRIM1Q9NZV1 1036 aa6.63□□□□□ -1.35
SSBP2-206ENST00000506960 PPP1R9AQ9ULJ8 1098 aa6.63□□□□□ -1.35
SSBP2-206ENST00000506960 IVNS1ABPQ9Y6Y0 642 aa6.63□□□□□ -1.35
SSBP2-206ENST00000506960 GLI1P08151 1106 aa6.62□□□□□ -1.35
SSBP2-206ENST00000506960 IFI16Q16666 785 aaKnown RBP6.62□□□□□ -1.35
SSBP2-206ENST00000506960 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.62□□□□□ -1.35
SSBP2-206ENST00000506960 DTHD1Q6ZMT9 781 aa6.62□□□□□ -1.35
SSBP2-206ENST00000506960 PLD6Q8N2A8 252 aaKnown RBP6.62□□□□□ -1.35
SSBP2-206ENST00000506960 WDR89Q96FK6 387 aaPredicted RBP6.62□□□□□ -1.35
SSBP2-206ENST00000506960 ZC3H12CQ9C0D7 883 aaKnown RBP6.62□□□□□ -1.35
SSBP2-206ENST00000506960 TMPRSS5Q9H3S3 457 aa6.62□□□□□ -1.35
SSBP2-206ENST00000506960 MKNK2Q9HBH9 465 aa6.62□□□□□ -1.35
SSBP2-206ENST00000506960 DYNC1LI2O43237 492 aaPredicted RBP6.61□□□□□ -1.35
SSBP2-206ENST00000506960 ZNF862O60290 1169 aa6.61□□□□□ -1.35
SSBP2-206ENST00000506960 KRT1P04264 644 aa6.61□□□□□ -1.35
SSBP2-206ENST00000506960 LIG1P18858 919 aa6.61□□□□□ -1.35
SSBP2-206ENST00000506960 ASPAP45381 313 aa6.61□□□□□ -1.35
SSBP2-206ENST00000506960 PLCB3Q01970 1234 aa6.61□□□□□ -1.35
SSBP2-206ENST00000506960 KRTAP1-1Q07627 177 aa6.61□□□□□ -1.35
SSBP2-206ENST00000506960 AOC3Q16853 763 aa6.61□□□□□ -1.35
SSBP2-206ENST00000506960 NXPE4Q6UWF7 544 aa6.61□□□□□ -1.35
SSBP2-206ENST00000506960 PDZD3Q86UT5 571 aa6.61□□□□□ -1.35
SSBP2-206ENST00000506960 SETDB2Q96T68 719 aa6.61□□□□□ -1.35
SSBP2-206ENST00000506960 PARD6AQ9NPB6 346 aa6.61□□□□□ -1.35
SSBP2-206ENST00000506960 SYNGAP1Q96PV0 1343 aa6.6□□□□□ -1.35
SSBP2-206ENST00000506960 TMEM265A0A087WTH1 108 aa6.6□□□□□ -1.35
SSBP2-206ENST00000506960 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.6□□□□□ -1.35
SSBP2-206ENST00000506960 TMPRSS2O15393 492 aa6.6□□□□□ -1.35
SSBP2-206ENST00000506960 GSTP1P09211 210 aaKnown RBP6.6□□□□□ -1.35
SSBP2-206ENST00000506960 SEZ6L2Q6UXD5 910 aa6.6□□□□□ -1.35
SSBP2-206ENST00000506960 PRR23BQ6ZRT6 265 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms