RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 NOB1Q9ULX3 412 aaKnown RBP12.01□□□□□ -0.49
CLCN3-205ENST00000506924 TAF1P21675 1872 aa12□□□□□ -0.49
CLCN3-205ENST00000506924 PCCAP05165 728 aaPredicted RBP12□□□□□ -0.49
CLCN3-205ENST00000506924 RARSP54136 660 aaKnown RBP12□□□□□ -0.49
CLCN3-205ENST00000506924 GCKRQ14397 625 aa12□□□□□ -0.49
CLCN3-205ENST00000506924 ALDH1L2Q3SY69 923 aa12□□□□□ -0.49
CLCN3-205ENST00000506924 BEND3Q5T5X7 828 aa12□□□□□ -0.49
CLCN3-205ENST00000506924 UBE3BQ7Z3V4 1068 aa12□□□□□ -0.49
CLCN3-205ENST00000506924 LINS1Q8NG48 757 aa12□□□□□ -0.49
CLCN3-205ENST00000506924 MKRN1Q9UHC7 482 aaKnown RBP12□□□□□ -0.49
CLCN3-205ENST00000506924 RNF123Q5XPI4 1314 aa12□□□□□ -0.49
CLCN3-205ENST00000506924 CHD4Q14839 1912 aa11.99□□□□□ -0.49
CLCN3-205ENST00000506924 BCAR3O75815 825 aa11.99□□□□□ -0.49
CLCN3-205ENST00000506924 ALDH1B1P30837 517 aa11.99□□□□□ -0.49
CLCN3-205ENST00000506924 SCTRP47872 440 aa11.99□□□□□ -0.49
CLCN3-205ENST00000506924 MEIOBQ8N635 442 aa11.99□□□□□ -0.49
CLCN3-205ENST00000506924 OSBPL3Q9H4L5 887 aa11.99□□□□□ -0.49
CLCN3-205ENST00000506924 CYLDQ9NQC7 956 aa11.99□□□□□ -0.49
CLCN3-205ENST00000506924 ABCC4O15439 1325 aa11.99□□□□□ -0.49
CLCN3-205ENST00000506924 RIC1Q4ADV7 1423 aa11.99□□□□□ -0.49
CLCN3-205ENST00000506924 FAM196BA6NMK8 535 aa11.98□□□□□ -0.49
CLCN3-205ENST00000506924 H7C1W4 665 aa11.98□□□□□ -0.49
CLCN3-205ENST00000506924 CAPN5O15484 640 aaPredicted RBP11.98□□□□□ -0.49
CLCN3-205ENST00000506924 ADH1AP07327 375 aa11.98□□□□□ -0.49
CLCN3-205ENST00000506924 CT47B1P0C2W7 299 aaPredicted RBP11.98□□□□□ -0.49
CLCN3-205ENST00000506924 HOXA10P31260 410 aaPredicted RBP11.98□□□□□ -0.49
CLCN3-205ENST00000506924 DDX46Q7L014 1031 aaKnown RBP11.98□□□□□ -0.49
CLCN3-205ENST00000506924 DEPDC4Q8N2C3 294 aa11.98□□□□□ -0.49
CLCN3-205ENST00000506924 C7orf43Q8WVR3 580 aa11.98□□□□□ -0.49
CLCN3-205ENST00000506924 FRAT1Q92837 279 aaPredicted RBP11.98□□□□□ -0.49
CLCN3-205ENST00000506924 PTPRCP08575 1304 aa11.97□□□□□ -0.49
CLCN3-205ENST00000506924 NFKBIEO00221 500 aa11.97□□□□□ -0.49
CLCN3-205ENST00000506924 PDE8AO60658 829 aa11.97□□□□□ -0.49
CLCN3-205ENST00000506924 PRELPP51888 382 aa11.97□□□□□ -0.49
CLCN3-205ENST00000506924 C9orf131Q5VYM1 1079 aa11.97□□□□□ -0.49
CLCN3-205ENST00000506924 LARGE2Q8N3Y3 721 aa11.97□□□□□ -0.49
CLCN3-205ENST00000506924 CRAMP1Q96RY5 1269 aa11.97□□□□□ -0.49
CLCN3-205ENST00000506924 SRCIN1Q9C0H9 1055 aa11.97□□□□□ -0.49
CLCN3-205ENST00000506924 ZFAND3Q9H8U3 227 aa11.97□□□□□ -0.49
CLCN3-205ENST00000506924 SEC31BQ9NQW1 1179 aa11.97□□□□□ -0.49
CLCN3-205ENST00000506924 TNNQ9UQP3 1299 aa11.97□□□□□ -0.49
CLCN3-205ENST00000506924 COL4A1P02462 1669 aa11.97□□□□□ -0.49
CLCN3-205ENST00000506924 GNRH1P01148 92 aa11.96□□□□□ -0.49
CLCN3-205ENST00000506924 ADD1P35611 737 aaKnown RBP11.96□□□□□ -0.49
CLCN3-205ENST00000506924 SF3B3Q15393 1217 aaKnown RBP11.96□□□□□ -0.49
CLCN3-205ENST00000506924 ZNF526Q8TF50 670 aaPredicted RBP11.96□□□□□ -0.49
CLCN3-205ENST00000506924 CELF1Q92879 486 aaKnown RBP11.96□□□□□ -0.49
CLCN3-205ENST00000506924 C9orf78Q9NZ63 289 aaPredicted RBP11.96□□□□□ -0.49
CLCN3-205ENST00000506924 RNF181Q9P0P0 153 aa11.96□□□□□ -0.49
CLCN3-205ENST00000506924 PCDHGA11Q9Y5H2 935 aa11.96□□□□□ -0.49
CLCN3-205ENST00000506924 CDHR2Q9BYE9 1310 aa11.95□□□□□ -0.5
CLCN3-205ENST00000506924 ATG7O95352 703 aa11.95□□□□□ -0.5
CLCN3-205ENST00000506924 RFX1P22670 979 aa11.95□□□□□ -0.5
CLCN3-205ENST00000506924 CASP7P55210 303 aa11.95□□□□□ -0.5
CLCN3-205ENST00000506924 CTSWP56202 376 aa11.95□□□□□ -0.5
CLCN3-205ENST00000506924 GTF2IP78347 998 aa11.95□□□□□ -0.5
CLCN3-205ENST00000506924 GRAPQ13588 217 aa11.95□□□□□ -0.5
CLCN3-205ENST00000506924 ELOAQ14241 798 aaKnown RBP11.95□□□□□ -0.5
CLCN3-205ENST00000506924 CCDC93Q567U6 631 aa11.95□□□□□ -0.5
CLCN3-205ENST00000506924 GRAPLQ8TC17 118 aaPredicted RBP11.95□□□□□ -0.5
CLCN3-205ENST00000506924 ARID3AQ99856 593 aa11.95□□□□□ -0.5
CLCN3-205ENST00000506924 CCDC88AQ3V6T2 1871 aa11.95□□□□□ -0.5
CLCN3-205ENST00000506924 SBF1O95248 1867 aa11.94□□□□□ -0.5
CLCN3-205ENST00000506924 GRM8O00222 908 aa11.94□□□□□ -0.5
CLCN3-205ENST00000506924 AXIN1O15169 862 aa11.94□□□□□ -0.5
CLCN3-205ENST00000506924 ALDH1L1O75891 902 aa11.94□□□□□ -0.5
CLCN3-205ENST00000506924 HSP90B1P14625 803 aaKnown RBP11.94□□□□□ -0.5
CLCN3-205ENST00000506924 CCDC152Q4G0S7 254 aa11.94□□□□□ -0.5
CLCN3-205ENST00000506924 SIX5Q8N196 739 aa11.94□□□□□ -0.5
CLCN3-205ENST00000506924 OGFOD1Q8N543 542 aa11.94□□□□□ -0.5
CLCN3-205ENST00000506924 TTLL11Q8NHH1 800 aa11.94□□□□□ -0.5
CLCN3-205ENST00000506924 TSEN34Q9BSV6 310 aaKnown RBP11.94□□□□□ -0.5
CLCN3-205ENST00000506924 TAOK3Q9H2K8 898 aa11.94□□□□□ -0.5
CLCN3-205ENST00000506924 GREM2Q9H772 168 aa11.94□□□□□ -0.5
CLCN3-205ENST00000506924 ZNF277Q9NRM2 450 aaPredicted RBP11.94□□□□□ -0.5
CLCN3-205ENST00000506924 FER1L6Q2WGJ9 1857 aa11.93□□□□□ -0.5
CLCN3-205ENST00000506924 BBOX1O75936 387 aa11.93□□□□□ -0.5
CLCN3-205ENST00000506924 NBPF7P0C2Y1 421 aaPredicted RBP11.93□□□□□ -0.5
CLCN3-205ENST00000506924 EPHA10Q5JZY3 1008 aa11.93□□□□□ -0.5
CLCN3-205ENST00000506924 SOGA3Q5TF21 947 aa11.93□□□□□ -0.5
CLCN3-205ENST00000506924 SUCLG2Q96I99 432 aa11.93□□□□□ -0.5
CLCN3-205ENST00000506924 API5Q9BZZ5 524 aaKnown RBP11.93□□□□□ -0.5
CLCN3-205ENST00000506924 DNAAF2Q9NVR5 837 aaKnown RBP11.93□□□□□ -0.5
CLCN3-205ENST00000506924 CHMP3Q9Y3E7 222 aa11.93□□□□□ -0.5
CLCN3-205ENST00000506924 ATP6V0A2Q9Y487 856 aa11.93□□□□□ -0.5
CLCN3-205ENST00000506924 KIF16BQ96L93 1317 aa11.92□□□□□ -0.5
CLCN3-205ENST00000506924 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.92□□□□□ -0.5
CLCN3-205ENST00000506924 LMNB1P20700 586 aa11.92□□□□□ -0.5
CLCN3-205ENST00000506924 RASA1P20936 1047 aa11.92□□□□□ -0.5
CLCN3-205ENST00000506924 RPS8P62241 208 aaKnown RBP11.92□□□□□ -0.5
CLCN3-205ENST00000506924 FOXO4P98177 505 aa11.92□□□□□ -0.5
CLCN3-205ENST00000506924 FKBP4Q02790 459 aaKnown RBP eCLIP11.92□□□□□ -0.5
CLCN3-205ENST00000506924 CBLBQ13191 982 aa11.92□□□□□ -0.5
CLCN3-205ENST00000506924 RTKN2Q8IZC4 609 aa11.92□□□□□ -0.5
CLCN3-205ENST00000506924 TMX4Q9H1E5 349 aaPredicted RBP11.92□□□□□ -0.5
CLCN3-205ENST00000506924 MYH3P11055 1940 aa11.92□□□□□ -0.5
CLCN3-205ENST00000506924 SPEF2Q9C093 1822 aa11.91□□□□□ -0.5
CLCN3-205ENST00000506924 UPP2O95045 317 aa11.91□□□□□ -0.5
CLCN3-205ENST00000506924 TRIM27P14373 513 aa11.91□□□□□ -0.5
CLCN3-205ENST00000506924 PTGIRP43119 386 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms