RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 CHMLP26374 656 aa15.45■□□□□ 0.06
TCOF1-210ENST00000506767 MCMDC2Q4G0Z9 681 aa15.45■□□□□ 0.06
TCOF1-210ENST00000506767 DNAJC5GQ8N7S2 189 aa15.45■□□□□ 0.06
TCOF1-210ENST00000506767 TGFBRAP1Q8WUH2 860 aa15.45■□□□□ 0.06
TCOF1-210ENST00000506767 CRNKL1Q9BZJ0 848 aaKnown RBP15.45■□□□□ 0.06
TCOF1-210ENST00000506767 TMEM39BQ9GZU3 492 aa15.45■□□□□ 0.06
TCOF1-210ENST00000506767 COL2A1P02458 1487 aaPredicted RBP15.45■□□□□ 0.06
TCOF1-210ENST00000506767 FLT1P17948 1338 aa15.44■□□□□ 0.06
TCOF1-210ENST00000506767 GPAA1O43292 621 aa15.44■□□□□ 0.06
TCOF1-210ENST00000506767 FMR1Q06787 632 aaKnown RBP eCLIP15.44■□□□□ 0.061e-6■■■□□ 18.8
TCOF1-210ENST00000506767 TCP10Q12799 353 aa15.44■□□□□ 0.06
TCOF1-210ENST00000506767 PICALMQ13492 652 aa15.44■□□□□ 0.06
TCOF1-210ENST00000506767 SH3BP5LQ7L8J4 393 aa15.44■□□□□ 0.06
TCOF1-210ENST00000506767 CDCA5Q96FF9 252 aa15.44■□□□□ 0.06
TCOF1-210ENST00000506767 OSBPL5Q9H0X9 879 aaPredicted RBP15.44■□□□□ 0.06
TCOF1-210ENST00000506767 ATRNL1Q5VV63 1379 aa15.44■□□□□ 0.06
TCOF1-210ENST00000506767 DDX60LQ5H9U9 1706 aaKnown RBP15.43■□□□□ 0.06
TCOF1-210ENST00000506767 PRKAB2O43741 272 aa15.43■□□□□ 0.06
TCOF1-210ENST00000506767 GNAT2P19087 354 aa15.43■□□□□ 0.06
TCOF1-210ENST00000506767 USP5P45974 858 aa15.43■□□□□ 0.06
TCOF1-210ENST00000506767 PRAMEF18Q5VWM3 479 aa15.43■□□□□ 0.06
TCOF1-210ENST00000506767 CWC27Q6UX04 472 aaKnown RBP15.43■□□□□ 0.06
TCOF1-210ENST00000506767 MAPKAPK5Q8IW41 473 aa15.43■□□□□ 0.06
TCOF1-210ENST00000506767 CDAN1Q8IWY9 1227 aa15.43■□□□□ 0.06
TCOF1-210ENST00000506767 SDR42E1Q8WUS8 393 aa15.43■□□□□ 0.06
TCOF1-210ENST00000506767 DIAPH3Q9NSV4 1193 aa15.43■□□□□ 0.06
TCOF1-210ENST00000506767 ATP8A2Q9NTI2 1148 aa15.43■□□□□ 0.06
TCOF1-210ENST00000506767 TRPM7Q96QT4 1865 aa15.43■□□□□ 0.06
TCOF1-210ENST00000506767 SSC5DA1L4H1 1573 aa15.42■□□□□ 0.06
TCOF1-210ENST00000506767 DDTLA6NHG4 134 aaPredicted RBP15.42■□□□□ 0.06
TCOF1-210ENST00000506767 GSG1L2A8MUP6 293 aa15.42■□□□□ 0.06
TCOF1-210ENST00000506767 NBPF12Q5TAG4 269 aaPredicted RBP15.42■□□□□ 0.06
TCOF1-210ENST00000506767 CST9Q5W186 159 aa15.42■□□□□ 0.06
TCOF1-210ENST00000506767 CCDC129Q6ZRS4 1044 aa15.42■□□□□ 0.06
TCOF1-210ENST00000506767 ZNF589Q86UQ0 364 aaPredicted RBP15.42■□□□□ 0.06
TCOF1-210ENST00000506767 DCP1AQ9NPI6 582 aaPredicted RBP15.42■□□□□ 0.06
TCOF1-210ENST00000506767 SLC4A4Q9Y6R1 1079 aa15.42■□□□□ 0.06
TCOF1-210ENST00000506767 MYH1P12882 1939 aa15.42■□□□□ 0.06
TCOF1-210ENST00000506767 NAV1Q8NEY1 1877 aa15.42■□□□□ 0.06
TCOF1-210ENST00000506767 PATL2C9JE40 543 aaKnown RBP15.41■□□□□ 0.06
TCOF1-210ENST00000506767 FOXP2O15409 715 aa15.41■□□□□ 0.06
TCOF1-210ENST00000506767 SUPT20HL1Q3ZLR7 823 aa15.41■□□□□ 0.06
TCOF1-210ENST00000506767 GIMAP6Q6P9H5 292 aa15.41■□□□□ 0.06
TCOF1-210ENST00000506767 IL25Q9H293 177 aa15.41■□□□□ 0.06
TCOF1-210ENST00000506767 DHX36Q9H2U1 1008 aaKnown RBP15.41■□□□□ 0.06
TCOF1-210ENST00000506767 CCDC171Q6TFL3 1326 aa15.41■□□□□ 0.06
TCOF1-210ENST00000506767 RAD50Q92878 1312 aa15.41■□□□□ 0.06
TCOF1-210ENST00000506767 SIPA1L1O43166 1804 aa15.4■□□□□ 0.06
TCOF1-210ENST00000506767 MAP3K10Q02779 954 aa15.4■□□□□ 0.06
TCOF1-210ENST00000506767 RUFY2Q8WXA3 655 aa15.4■□□□□ 0.06
TCOF1-210ENST00000506767 SGSM2O43147 1006 aa15.39■□□□□ 0.05
TCOF1-210ENST00000506767 CDC45O75419 566 aa15.39■□□□□ 0.05
TCOF1-210ENST00000506767 CELF2O95319 508 aaKnown RBP15.39■□□□□ 0.05
TCOF1-210ENST00000506767 MFAP1P55081 439 aaKnown RBP15.39■□□□□ 0.05
TCOF1-210ENST00000506767 VPS53Q5VIR6 699 aa15.39■□□□□ 0.05
TCOF1-210ENST00000506767 METTL16Q86W50 562 aaKnown RBP15.39■□□□□ 0.05
TCOF1-210ENST00000506767 IFNL3Q8IZI9 196 aa15.39■□□□□ 0.05
TCOF1-210ENST00000506767 KLRG1Q96E93 195 aa15.39■□□□□ 0.05
TCOF1-210ENST00000506767 EPB41L4AQ9HCS5 686 aaPredicted RBP15.39■□□□□ 0.05
TCOF1-210ENST00000506767 PALD1Q9ULE6 856 aa15.39■□□□□ 0.05
TCOF1-210ENST00000506767 BAZ2AQ9UIF9 1905 aaKnown RBP15.39■□□□□ 0.05
TCOF1-210ENST00000506767 TBC1D12O60347 775 aa15.38■□□□□ 0.05
TCOF1-210ENST00000506767 HSPD1P10809 573 aaKnown RBP15.38■□□□□ 0.05
TCOF1-210ENST00000506767 NF2P35240 595 aa15.38■□□□□ 0.05
TCOF1-210ENST00000506767 ALX1Q15699 326 aa15.38■□□□□ 0.05
TCOF1-210ENST00000506767 MAP3K11Q16584 847 aa15.38■□□□□ 0.05
TCOF1-210ENST00000506767 SBK1Q52WX2 424 aa15.38■□□□□ 0.05
TCOF1-210ENST00000506767 CTR9Q6PD62 1173 aa15.38■□□□□ 0.05
TCOF1-210ENST00000506767 ZSCAN29Q8IWY8 852 aaPredicted RBP15.38■□□□□ 0.05
TCOF1-210ENST00000506767 HOOK2Q96ED9 719 aa15.38■□□□□ 0.05
TCOF1-210ENST00000506767 CSRNP1Q96S65 589 aa15.38■□□□□ 0.05
TCOF1-210ENST00000506767 MCM9Q9NXL9 1143 aa15.38■□□□□ 0.05
TCOF1-210ENST00000506767 PI4KBQ9UBF8 816 aa15.38■□□□□ 0.05
TCOF1-210ENST00000506767 SAP30BPQ9UHR5 308 aaKnown RBP15.38■□□□□ 0.05
TCOF1-210ENST00000506767 PAPPA2Q9BXP8 1791 aa15.37■□□□□ 0.05
TCOF1-210ENST00000506767 USP2O75604 605 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-210ENST00000506767 PLCD1P51178 756 aa15.37■□□□□ 0.05
TCOF1-210ENST00000506767 FKBP1BP68106 108 aa15.37■□□□□ 0.05
TCOF1-210ENST00000506767 IFFO2Q5TF58 517 aa15.37■□□□□ 0.05
TCOF1-210ENST00000506767 TTC6Q86TZ1 520 aa15.37■□□□□ 0.05
TCOF1-210ENST00000506767 FOXP4Q8IVH2 680 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-210ENST00000506767 ESYT1Q9BSJ8 1104 aa15.37■□□□□ 0.05
TCOF1-210ENST00000506767 EHD4Q9H223 541 aa15.37■□□□□ 0.05
TCOF1-210ENST00000506767 ZNF408Q9H9D4 720 aa15.37■□□□□ 0.05
TCOF1-210ENST00000506767 GBA2Q9HCG7 927 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-210ENST00000506767 TMEM88BA6NKF7 163 aa15.36■□□□□ 0.05
TCOF1-210ENST00000506767 USP17L12C9JPN9 530 aa15.36■□□□□ 0.05
TCOF1-210ENST00000506767 USP17L21D6R901 530 aa15.36■□□□□ 0.05
TCOF1-210ENST00000506767 APPP05067 770 aa15.36■□□□□ 0.05
TCOF1-210ENST00000506767 POLR3DP05423 398 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-210ENST00000506767 C12orf60Q5U649 245 aa15.36■□□□□ 0.05
TCOF1-210ENST00000506767 DCAF15Q66K64 600 aa15.36■□□□□ 0.05
TCOF1-210ENST00000506767 MIGA2Q7L4E1 593 aa15.36■□□□□ 0.05
TCOF1-210ENST00000506767 DDRGK1Q96HY6 314 aa15.36■□□□□ 0.05
TCOF1-210ENST00000506767 DSCC1Q9BVC3 393 aa15.36■□□□□ 0.05
TCOF1-210ENST00000506767 NACAP1Q9BZK3 213 aa15.36■□□□□ 0.05
TCOF1-210ENST00000506767 ARPP21Q9UBL0 812 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-210ENST00000506767 ZNF112Q9UJU3 913 aa15.36■□□□□ 0.05
TCOF1-210ENST00000506767 FZD1Q9UP38 647 aa15.36■□□□□ 0.05
TCOF1-210ENST00000506767 ZMYM6O95789 1325 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms