RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 NTRK3Q16288 839 aa14.27□□□□□ -0.12
LIN54-206ENST00000506560 DZIP1Q86YF9 867 aaKnown RBP14.27□□□□□ -0.12
LIN54-206ENST00000506560 RBM17Q96I25 401 aaKnown RBP14.27□□□□□ -0.12
LIN54-206ENST00000506560 BAZ2BQ9UIF8 2168 aaKnown RBP14.27□□□□□ -0.13
LIN54-206ENST00000506560 GOLGA8AA7E2F4 631 aa14.27□□□□□ -0.13
LIN54-206ENST00000506560 PLSCR1O15162 318 aa14.27□□□□□ -0.13
LIN54-206ENST00000506560 MMP10P09238 476 aa14.27□□□□□ -0.13
LIN54-206ENST00000506560 SGMS1Q86VZ5 419 aa14.27□□□□□ -0.13
LIN54-206ENST00000506560 CD209Q9NNX6 404 aa14.27□□□□□ -0.13
LIN54-206ENST00000506560 USP17L8P0C7I0 530 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 RXRBP28702 533 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 GUCY1A2P33402 732 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 CAMK4Q16566 473 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 POTEAQ6S8J7 498 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 TBC1D16Q8TBP0 767 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 C8orf76Q96K31 380 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 KRT23Q9C075 422 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 ISY1Q9ULR0 285 aaKnown RBP14.26□□□□□ -0.13
LIN54-206ENST00000506560 CCDC88AQ3V6T2 1871 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 MYH15Q9Y2K3 1946 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 RIMBP2O15034 1052 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 CNNM2Q9H8M5 875 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 GGA1Q9UJY5 639 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 SLC12A7Q9Y666 1083 aa14.26□□□□□ -0.13
LIN54-206ENST00000506560 PDS5AQ29RF7 1337 aaKnown RBP14.25□□□□□ -0.13
LIN54-206ENST00000506560 C6orf229H3BNL8 230 aa14.25□□□□□ -0.13
LIN54-206ENST00000506560 HOXA10P31260 410 aaPredicted RBP14.25□□□□□ -0.13
LIN54-206ENST00000506560 FAM47AQ5JRC9 791 aa14.25□□□□□ -0.13
LIN54-206ENST00000506560 FBXO18Q8NFZ0 1043 aa14.25□□□□□ -0.13
LIN54-206ENST00000506560 SH3RF3Q8TEJ3 882 aaPredicted RBP14.25□□□□□ -0.13
LIN54-206ENST00000506560 TNKSO95271 1327 aa14.25□□□□□ -0.13
LIN54-206ENST00000506560 ECM29Q5VYK3 1845 aa14.25□□□□□ -0.13
LIN54-206ENST00000506560 KLRG2A4D1S0 409 aaPredicted RBP14.25□□□□□ -0.13
LIN54-206ENST00000506560 CCDC69A6NI79 296 aa14.25□□□□□ -0.13
LIN54-206ENST00000506560 LDHBP07195 334 aaKnown RBP14.25□□□□□ -0.13
LIN54-206ENST00000506560 LIFRP42702 1097 aa14.25□□□□□ -0.13
LIN54-206ENST00000506560 WTAPQ15007 396 aa14.25□□□□□ -0.13
LIN54-206ENST00000506560 CCDC183Q5T5S1 534 aa14.25□□□□□ -0.13
LIN54-206ENST00000506560 NUP133Q8WUM0 1156 aa14.25□□□□□ -0.13
LIN54-206ENST00000506560 BRIP1Q9BX63 1249 aa14.25□□□□□ -0.13
LIN54-206ENST00000506560 ANAPC4Q9UJX5 808 aa14.25□□□□□ -0.13
LIN54-206ENST00000506560 SEC23AQ15436 765 aa14.24□□□□□ -0.13
LIN54-206ENST00000506560 ZNF804AQ7Z570 1209 aa14.24□□□□□ -0.13
LIN54-206ENST00000506560 SCAND2PQ9GZW5 306 aaPredicted RBP14.24□□□□□ -0.13
LIN54-206ENST00000506560 ZSCAN16Q9H4T2 348 aaPredicted RBP14.24□□□□□ -0.13
LIN54-206ENST00000506560 DUOX1Q9NRD9 1551 aa14.24□□□□□ -0.13
LIN54-206ENST00000506560 ELP1O95163 1332 aa14.24□□□□□ -0.13
LIN54-206ENST00000506560 UTRNP46939 3433 aa14.24□□□□□ -0.13
LIN54-206ENST00000506560 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.24□□□□□ -0.13
LIN54-206ENST00000506560 DHX16O60231 1041 aaKnown RBP14.24□□□□□ -0.13
LIN54-206ENST00000506560 ENAHQ8N8S7 591 aaPredicted RBP14.24□□□□□ -0.13
LIN54-206ENST00000506560 CHMP4CQ96CF2 233 aa14.24□□□□□ -0.13
LIN54-206ENST00000506560 DYNLL2Q96FJ2 89 aa14.24□□□□□ -0.13
LIN54-206ENST00000506560 ALG1Q9BT22 464 aa14.24□□□□□ -0.13
LIN54-206ENST00000506560 MXD3Q9BW11 206 aa14.24□□□□□ -0.13
LIN54-206ENST00000506560 PDGFDQ9GZP0 370 aaPredicted RBP14.24□□□□□ -0.13
LIN54-206ENST00000506560 DACT1Q9NYF0 836 aa14.24□□□□□ -0.13
LIN54-206ENST00000506560 PPEF1O14829 653 aaPredicted RBP14.23□□□□□ -0.13
LIN54-206ENST00000506560 NR1I2O75469 434 aa14.23□□□□□ -0.13
LIN54-206ENST00000506560 SRGNP10124 158 aa14.23□□□□□ -0.13
LIN54-206ENST00000506560 PDIA4P13667 645 aaKnown RBP14.23□□□□□ -0.13
LIN54-206ENST00000506560 SLC26A6Q9BXS9 759 aa14.23□□□□□ -0.13
LIN54-206ENST00000506560 hCG_1642624A0A1W2PR95 340 aa14.23□□□□□ -0.13
LIN54-206ENST00000506560 BBOX1O75936 387 aa14.23□□□□□ -0.13
LIN54-206ENST00000506560 WDR66Q8TBY9 1149 aa14.23□□□□□ -0.13
LIN54-206ENST00000506560 SYAP1Q96A49 352 aaPredicted RBP14.23□□□□□ -0.13
LIN54-206ENST00000506560 CRAMP1Q96RY5 1269 aa14.23□□□□□ -0.13
LIN54-206ENST00000506560 CRNKL1Q9BZJ0 848 aaKnown RBP14.23□□□□□ -0.13
LIN54-206ENST00000506560 MCM9Q9NXL9 1143 aa14.23□□□□□ -0.13
LIN54-206ENST00000506560 CLIC4Q9Y696 253 aa14.23□□□□□ -0.13
LIN54-206ENST00000506560 ATP2B4P23634 1241 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 EN1Q05925 392 aaPredicted RBP14.22□□□□□ -0.13
LIN54-206ENST00000506560 EZH2Q15910 746 aaKnown RBP14.22□□□□□ -0.13
LIN54-206ENST00000506560 CSPP1Q1MSJ5 1256 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 ZNF654Q8IZM8 581 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 NLGN1Q8N2Q7 840 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 UBAC1Q9BSL1 405 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 TSPY26PQ9H489 355 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 RNF41Q9H4P4 317 aaPredicted RBP14.22□□□□□ -0.13
LIN54-206ENST00000506560 KIF23Q02241 960 aaPredicted RBP14.22□□□□□ -0.13
LIN54-206ENST00000506560 KRT40Q6A162 431 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 FAM43AQ8N2R8 423 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 SLC44A5Q8NCS7 719 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 TGFBRAP1Q8WUH2 860 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 ESR2Q92731 530 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 GOLPH3LQ9H4A5 285 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 MKRN1Q9UHC7 482 aaKnown RBP14.22□□□□□ -0.13
LIN54-206ENST00000506560 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.22□□□□□ -0.13
LIN54-206ENST00000506560 KIF3AQ9Y496 699 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 COL11A2P13942 1736 aaPredicted RBP14.22□□□□□ -0.13
LIN54-206ENST00000506560 IARSP41252 1262 aaKnown RBP14.22□□□□□ -0.13
LIN54-206ENST00000506560 MFSD14BQ5SR56 506 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 C15orf52Q6ZUT6 534 aaKnown RBP14.22□□□□□ -0.13
LIN54-206ENST00000506560 CKAP2LQ8IYA6 745 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 BICD2Q8TD16 824 aa14.22□□□□□ -0.13
LIN54-206ENST00000506560 ZNF219Q9P2Y4 722 aaPredicted RBP14.22□□□□□ -0.13
LIN54-206ENST00000506560 SAP30BPQ9UHR5 308 aaKnown RBP14.22□□□□□ -0.13
LIN54-206ENST00000506560 MAST2Q6P0Q8 1798 aa14.21□□□□□ -0.13
LIN54-206ENST00000506560 LTBP1Q14766 1721 aa14.21□□□□□ -0.13
LIN54-206ENST00000506560 KIAA1551Q9HCM1 1747 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms