RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 ARHGEF6Q15052 776 aa17.09■□□□□ 0.33
SNHG4-203ENST00000506188 PKN2Q16513 984 aaKnown RBP17.09■□□□□ 0.33
SNHG4-203ENST00000506188 CTU1Q7Z7A3 348 aaKnown RBP17.09■□□□□ 0.33
SNHG4-203ENST00000506188 TEX11Q8IYF3 940 aa17.09■□□□□ 0.33
SNHG4-203ENST00000506188 ZKSCAN4Q969J2 545 aaPredicted RBP17.09■□□□□ 0.33
SNHG4-203ENST00000506188 CFHR5Q9BXR6 569 aa17.09■□□□□ 0.33
SNHG4-203ENST00000506188 IL1RAPL2Q9NP60 686 aa17.09■□□□□ 0.33
SNHG4-203ENST00000506188 CCL15-CCL14A0A0B4J2E2 113 aa17.08■□□□□ 0.32
SNHG4-203ENST00000506188 CYP2E1P05181 493 aaPredicted RBP17.08■□□□□ 0.32
SNHG4-203ENST00000506188 ZAP70P43403 619 aa17.08■□□□□ 0.32
SNHG4-203ENST00000506188 CCL15Q16663 113 aa17.08■□□□□ 0.32
SNHG4-203ENST00000506188 TRIM34Q9BYJ4 488 aa17.08■□□□□ 0.32
SNHG4-203ENST00000506188 MCOLN1Q9GZU1 580 aa17.08■□□□□ 0.32
SNHG4-203ENST00000506188 ARAP2Q8WZ64 1704 aa17.07■□□□□ 0.32
SNHG4-203ENST00000506188 TESPA1A2RU30 521 aaPredicted RBP17.07■□□□□ 0.32
SNHG4-203ENST00000506188 PPIL2Q13356 520 aa17.07■□□□□ 0.32
SNHG4-203ENST00000506188 DHX36Q9H2U1 1008 aaKnown RBP17.07■□□□□ 0.32
SNHG4-203ENST00000506188 ZFYVE28Q9HCC9 887 aa17.07■□□□□ 0.32
SNHG4-203ENST00000506188 ZNF112Q9UJU3 913 aa17.07■□□□□ 0.32
SNHG4-203ENST00000506188 CCDC85CA6NKD9 419 aa17.06■□□□□ 0.32
SNHG4-203ENST00000506188 CYP7A1P22680 504 aa17.06■□□□□ 0.32
SNHG4-203ENST00000506188 C20orf194Q5TEA3 1177 aa17.06■□□□□ 0.32
SNHG4-203ENST00000506188 ZNF296Q8WUU4 475 aaPredicted RBP17.06■□□□□ 0.32
SNHG4-203ENST00000506188 LRRCC1Q9C099 1032 aa17.06■□□□□ 0.32
SNHG4-203ENST00000506188 TLR7Q9NYK1 1049 aaKnown RBP17.06■□□□□ 0.32
SNHG4-203ENST00000506188 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
SNHG4-203ENST00000506188 SNCAIPQ9Y6H5 919 aa17.06■□□□□ 0.32
SNHG4-203ENST00000506188 CTNND1O60716 968 aaKnown RBP17.05■□□□□ 0.32
SNHG4-203ENST00000506188 INPP5BP32019 993 aa17.05■□□□□ 0.32
SNHG4-203ENST00000506188 GJA5P36382 358 aa17.05■□□□□ 0.32
SNHG4-203ENST00000506188 RHBDL3P58872 404 aa17.05■□□□□ 0.32
SNHG4-203ENST00000506188 PPP4CP60510 307 aa17.05■□□□□ 0.32
SNHG4-203ENST00000506188 ZFPM1Q8IX07 1006 aa17.05■□□□□ 0.32
SNHG4-203ENST00000506188 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.05■□□□□ 0.32
SNHG4-203ENST00000506188 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
SNHG4-203ENST00000506188 AATFQ9NY61 560 aaKnown RBP eCLIP17.05■□□□□ 0.321e-323■■■■□ 24.9
SNHG4-203ENST00000506188 IGF2BP3O00425 579 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNHG4-203ENST00000506188 TAF1CQ15572 869 aaPredicted RBP17.04■□□□□ 0.32
SNHG4-203ENST00000506188 NOL9Q5SY16 702 aaKnown RBP17.04■□□□□ 0.32
SNHG4-203ENST00000506188 SIRT2Q8IXJ6 389 aa17.04■□□□□ 0.32
SNHG4-203ENST00000506188 SCYL3Q8IZE3 742 aa17.04■□□□□ 0.32
SNHG4-203ENST00000506188 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNHG4-203ENST00000506188 ERO1AQ96HE7 468 aa17.04■□□□□ 0.32
SNHG4-203ENST00000506188 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
SNHG4-203ENST00000506188 MS4A4AQ96JQ5 239 aa17.04■□□□□ 0.32
SNHG4-203ENST00000506188 OSBPL5Q9H0X9 879 aaPredicted RBP17.04■□□□□ 0.32
SNHG4-203ENST00000506188 PI4KBQ9UBF8 816 aa17.04■□□□□ 0.32
SNHG4-203ENST00000506188 ECM29Q5VYK3 1845 aa17.03■□□□□ 0.32
SNHG4-203ENST00000506188 CXCL11O14625 94 aa17.03■□□□□ 0.32
SNHG4-203ENST00000506188 IRF6O14896 467 aa17.03■□□□□ 0.32
SNHG4-203ENST00000506188 TBC1D12O60347 775 aa17.03■□□□□ 0.32
SNHG4-203ENST00000506188 HLA-DOAP06340 250 aa17.03■□□□□ 0.32
SNHG4-203ENST00000506188 CRACR2BQ8N4Y2 399 aaPredicted RBP17.03■□□□□ 0.32
SNHG4-203ENST00000506188 SH3RF3Q8TEJ3 882 aaPredicted RBP17.03■□□□□ 0.32
SNHG4-203ENST00000506188 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
SNHG4-203ENST00000506188 BRI3BPQ8WY22 251 aa17.03■□□□□ 0.32
SNHG4-203ENST00000506188 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNHG4-203ENST00000506188 PIH1D3Q9NQM4 214 aaKnown RBP17.03■□□□□ 0.32
SNHG4-203ENST00000506188 HERC5Q9UII4 1024 aaKnown RBP17.03■□□□□ 0.32
SNHG4-203ENST00000506188 DDTLA6NHG4 134 aaPredicted RBP17.02■□□□□ 0.32
SNHG4-203ENST00000506188 USP5P45974 858 aa17.02■□□□□ 0.32
SNHG4-203ENST00000506188 MAP3K10Q02779 954 aa17.02■□□□□ 0.32
SNHG4-203ENST00000506188 CRHR2Q13324 411 aa17.02■□□□□ 0.32
SNHG4-203ENST00000506188 KIF22Q14807 665 aa17.02■□□□□ 0.32
SNHG4-203ENST00000506188 FASTKD5Q7L8L6 764 aaKnown RBP17.02■□□□□ 0.32
SNHG4-203ENST00000506188 FOXP4Q8IVH2 680 aaPredicted RBP17.02■□□□□ 0.32
SNHG4-203ENST00000506188 MAGEB6Q8N7X4 407 aa17.02■□□□□ 0.32
SNHG4-203ENST00000506188 ZNF384Q8TF68 577 aa17.02■□□□□ 0.32
SNHG4-203ENST00000506188 TGFBRAP1Q8WUH2 860 aa17.02■□□□□ 0.32
SNHG4-203ENST00000506188 DNAJC2Q99543 621 aaKnown RBP17.02■□□□□ 0.32
SNHG4-203ENST00000506188 DDX4Q9NQI0 724 aaKnown RBP17.02■□□□□ 0.32
SNHG4-203ENST00000506188 ZHX2Q9Y6X8 837 aa17.02■□□□□ 0.32
SNHG4-203ENST00000506188 RRP1P56182 461 aaKnown RBP17.01■□□□□ 0.31
SNHG4-203ENST00000506188 SP3Q02447 781 aa17.01■□□□□ 0.31
SNHG4-203ENST00000506188 SLC9C2Q5TAH2 1124 aa17.01■□□□□ 0.31
SNHG4-203ENST00000506188 PTPN18Q99952 460 aa17.01■□□□□ 0.31
SNHG4-203ENST00000506188 TBC1D2Q9BYX2 928 aa17.01■□□□□ 0.31
SNHG4-203ENST00000506188 ATRNL1Q5VV63 1379 aa17.01■□□□□ 0.31
SNHG4-203ENST00000506188 GOLIM4O00461 696 aa17■□□□□ 0.31
SNHG4-203ENST00000506188 ZSCAN25Q6NSZ9 544 aa17■□□□□ 0.31
SNHG4-203ENST00000506188 SH3BP5LQ7L8J4 393 aa17■□□□□ 0.31
SNHG4-203ENST00000506188 MAPKAPK5Q8IW41 473 aa17■□□□□ 0.31
SNHG4-203ENST00000506188 KCNH4Q9UQ05 1017 aa17■□□□□ 0.31
SNHG4-203ENST00000506188 PHF20L1A8MW92 1017 aa16.99■□□□□ 0.31
SNHG4-203ENST00000506188 PTPRAP18433 802 aa16.99■□□□□ 0.31
SNHG4-203ENST00000506188 ATP5JP18859 108 aa16.99■□□□□ 0.31
SNHG4-203ENST00000506188 AAMPQ13685 434 aa16.99■□□□□ 0.31
SNHG4-203ENST00000506188 FBXO46Q6PJ61 603 aaPredicted RBP16.99■□□□□ 0.31
SNHG4-203ENST00000506188 ANKRD23Q86SG2 305 aa16.99■□□□□ 0.31
SNHG4-203ENST00000506188 TTC6Q86TZ1 520 aa16.99■□□□□ 0.31
SNHG4-203ENST00000506188 MIGA1Q8NAN2 632 aa16.99■□□□□ 0.31
SNHG4-203ENST00000506188 AS3MTQ9HBK9 375 aa16.99■□□□□ 0.31
SNHG4-203ENST00000506188 RFX7Q2KHR2 1363 aa16.99■□□□□ 0.31
SNHG4-203ENST00000506188 MYH13Q9UKX3 1938 aa16.98■□□□□ 0.31
SNHG4-203ENST00000506188 MAGEB6P1A0A0J9YX57 407 aa16.98■□□□□ 0.31
SNHG4-203ENST00000506188 BTBD19C9JJ37 291 aa16.98■□□□□ 0.31
SNHG4-203ENST00000506188 FAM43AQ8N2R8 423 aa16.98■□□□□ 0.31
SNHG4-203ENST00000506188 DDRGK1Q96HY6 314 aa16.98■□□□□ 0.31
SNHG4-203ENST00000506188 CRNKL1Q9BZJ0 848 aaKnown RBP16.98■□□□□ 0.31
SNHG4-203ENST00000506188 BOLA2Q9H3K6 86 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms