RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 MAGEB6Q8N7X4 407 aa11.89□□□□□ -0.51
NR1I3-220ENST00000505005 EXOC6Q8TAG9 804 aa11.89□□□□□ -0.51
NR1I3-220ENST00000505005 CSRNP1Q96S65 589 aa11.89□□□□□ -0.51
NR1I3-220ENST00000505005 TLR7Q9NYK1 1049 aaKnown RBP11.89□□□□□ -0.51
NR1I3-220ENST00000505005 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.89□□□□□ -0.51
NR1I3-220ENST00000505005 MAST2Q6P0Q8 1798 aa11.89□□□□□ -0.51
NR1I3-220ENST00000505005 MAGEB6P1A0A0J9YX57 407 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 HIP1O00291 1037 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 USP2O75604 605 aaPredicted RBP11.88□□□□□ -0.51
NR1I3-220ENST00000505005 USP5P45974 858 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 RGS3P49796 1198 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 MAP3K10Q02779 954 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 PI16Q6UXB8 463 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 CHD1LQ86WJ1 897 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 KBTBD3Q8NAB2 608 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 EVI5LQ96CN4 794 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 TEPSINQ96N21 525 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 TMEM39BQ9GZU3 492 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 RNF39Q9H2S5 420 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 ZNF287Q9HBT7 754 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 ATP8A2Q9NTI2 1148 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 SAGE1Q9NXZ1 904 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 AATFQ9NY61 560 aaKnown RBP eCLIP11.88□□□□□ -0.51
NR1I3-220ENST00000505005 STAP2Q9UGK3 403 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 ATRNL1Q5VV63 1379 aa11.88□□□□□ -0.51
NR1I3-220ENST00000505005 UBE2Q2LH0YL09 131 aa11.87□□□□□ -0.51
NR1I3-220ENST00000505005 CTNND1O60716 968 aaKnown RBP11.87□□□□□ -0.51
NR1I3-220ENST00000505005 CTCFP49711 727 aaPredicted RBP11.87□□□□□ -0.51
NR1I3-220ENST00000505005 MFAP1P55081 439 aaKnown RBP11.87□□□□□ -0.51
NR1I3-220ENST00000505005 RHBDL3P58872 404 aa11.87□□□□□ -0.51
NR1I3-220ENST00000505005 PPATQ06203 517 aa11.87□□□□□ -0.51
NR1I3-220ENST00000505005 CYP4F22Q6NT55 531 aa11.87□□□□□ -0.51
NR1I3-220ENST00000505005 GIMAP6Q6P9H5 292 aa11.87□□□□□ -0.51
NR1I3-220ENST00000505005 ERO1BQ86YB8 467 aa11.87□□□□□ -0.51
NR1I3-220ENST00000505005 OSBPL5Q9H0X9 879 aaPredicted RBP11.87□□□□□ -0.51
NR1I3-220ENST00000505005 BCL11AQ9H165 835 aa11.87□□□□□ -0.51
NR1I3-220ENST00000505005 OSBPL3Q9H4L5 887 aa11.87□□□□□ -0.51
NR1I3-220ENST00000505005 ZCCHC17Q9NP64 241 aaKnown RBP11.87□□□□□ -0.51
NR1I3-220ENST00000505005 PICK1Q9NRD5 415 aa11.87□□□□□ -0.51
NR1I3-220ENST00000505005 SMARCA5O60264 1052 aaPredicted RBP11.86□□□□□ -0.51
NR1I3-220ENST00000505005 PDE6AP16499 860 aa11.86□□□□□ -0.51
NR1I3-220ENST00000505005 ADD2P35612 726 aa11.86□□□□□ -0.51
NR1I3-220ENST00000505005 TM4SF4P48230 202 aa11.86□□□□□ -0.51
NR1I3-220ENST00000505005 GTF2A2P52657 109 aa11.86□□□□□ -0.51
NR1I3-220ENST00000505005 NUCB1Q02818 461 aa11.86□□□□□ -0.51
NR1I3-220ENST00000505005 TCP10Q12799 353 aa11.86□□□□□ -0.51
NR1I3-220ENST00000505005 PICALMQ13492 652 aa11.86□□□□□ -0.51
NR1I3-220ENST00000505005 ARHGEF6Q15052 776 aa11.86□□□□□ -0.51
NR1I3-220ENST00000505005 CRACR2BQ8N4Y2 399 aaPredicted RBP11.86□□□□□ -0.51
NR1I3-220ENST00000505005 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.86□□□□□ -0.51
NR1I3-220ENST00000505005 NACAP1Q9BZK3 213 aa11.86□□□□□ -0.51
NR1I3-220ENST00000505005 PIH1D3Q9NQM4 214 aaKnown RBP11.86□□□□□ -0.51
NR1I3-220ENST00000505005 WBP1LQ9NX94 342 aa11.86□□□□□ -0.51
NR1I3-220ENST00000505005 FAM198AQ9UFP1 575 aa11.86□□□□□ -0.51
NR1I3-220ENST00000505005 ZNF112Q9UJU3 913 aa11.86□□□□□ -0.51
NR1I3-220ENST00000505005 DOCK2Q92608 1830 aa11.86□□□□□ -0.51
NR1I3-220ENST00000505005 NT5C2P49902 561 aa11.85□□□□□ -0.51
NR1I3-220ENST00000505005 HTRA3P83110 453 aa11.85□□□□□ -0.51
NR1I3-220ENST00000505005 FMR1Q06787 632 aaKnown RBP eCLIP11.85□□□□□ -0.51
NR1I3-220ENST00000505005 GRM1Q13255 1194 aa11.85□□□□□ -0.51
NR1I3-220ENST00000505005 NOL9Q5SY16 702 aaKnown RBP11.85□□□□□ -0.51
NR1I3-220ENST00000505005 PRAMEF18Q5VWM3 479 aa11.85□□□□□ -0.51
NR1I3-220ENST00000505005 SPRYD7Q5W111 196 aa11.85□□□□□ -0.51
NR1I3-220ENST00000505005 RASAL3Q86YV0 1011 aa11.85□□□□□ -0.51
NR1I3-220ENST00000505005 TGFBRAP1Q8WUH2 860 aa11.85□□□□□ -0.51
NR1I3-220ENST00000505005 APPBP2Q92624 585 aa11.85□□□□□ -0.51
NR1I3-220ENST00000505005 WRNIP1Q96S55 665 aa11.85□□□□□ -0.51
NR1I3-220ENST00000505005 EHD4Q9H223 541 aa11.85□□□□□ -0.51
NR1I3-220ENST00000505005 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.85□□□□□ -0.51
NR1I3-220ENST00000505005 AS3MTQ9HBK9 375 aa11.85□□□□□ -0.51
NR1I3-220ENST00000505005 PCDHAC2Q9Y5I4 1007 aa11.85□□□□□ -0.51
NR1I3-220ENST00000505005 ZNF532Q9HCE3 1301 aa11.85□□□□□ -0.51
NR1I3-220ENST00000505005 RFX7Q2KHR2 1363 aa11.84□□□□□ -0.51
NR1I3-220ENST00000505005 CXCL11O14625 94 aa11.84□□□□□ -0.51
NR1I3-220ENST00000505005 RNF113AO15541 343 aaKnown RBP11.84□□□□□ -0.51
NR1I3-220ENST00000505005 POLR3DP05423 398 aaPredicted RBP11.84□□□□□ -0.51
NR1I3-220ENST00000505005 ASNSP08243 561 aa11.84□□□□□ -0.51
NR1I3-220ENST00000505005 CETPP11597 493 aa11.84□□□□□ -0.51
NR1I3-220ENST00000505005 CACNB3P54284 484 aa11.84□□□□□ -0.51
NR1I3-220ENST00000505005 PDE1AP54750 535 aa11.84□□□□□ -0.51
NR1I3-220ENST00000505005 PRKG1Q13976 671 aa11.84□□□□□ -0.51
NR1I3-220ENST00000505005 NOM1Q5C9Z4 860 aaKnown RBP11.84□□□□□ -0.51
NR1I3-220ENST00000505005 FSD1Q9BTV5 496 aa11.84□□□□□ -0.51
NR1I3-220ENST00000505005 ANTXR1Q9H6X2 564 aa11.84□□□□□ -0.51
NR1I3-220ENST00000505005 PRDM10Q9NQV6 1147 aa11.84□□□□□ -0.51
NR1I3-220ENST00000505005 SWAP70Q9UH65 585 aa11.84□□□□□ -0.51
NR1I3-220ENST00000505005 SPDYE5A6NIY4 337 aa11.83□□□□□ -0.52
NR1I3-220ENST00000505005 FAM155AB1AL88 458 aaPredicted RBP11.83□□□□□ -0.52
NR1I3-220ENST00000505005 SLC3A2P08195 630 aaKnown RBP11.83□□□□□ -0.52
NR1I3-220ENST00000505005 KIF23Q02241 960 aaPredicted RBP11.83□□□□□ -0.52
NR1I3-220ENST00000505005 NFIAQ12857 509 aa11.83□□□□□ -0.52
NR1I3-220ENST00000505005 PPIL2Q13356 520 aa11.83□□□□□ -0.52
NR1I3-220ENST00000505005 SNAPC2Q13487 334 aa11.83□□□□□ -0.52
NR1I3-220ENST00000505005 PPP4R3BQ5MIZ7 849 aa11.83□□□□□ -0.52
NR1I3-220ENST00000505005 CENPQQ7L2Z9 268 aaPredicted RBP11.83□□□□□ -0.52
NR1I3-220ENST00000505005 FASTKD5Q7L8L6 764 aaKnown RBP11.83□□□□□ -0.52
NR1I3-220ENST00000505005 METTL16Q86W50 562 aaKnown RBP11.83□□□□□ -0.52
NR1I3-220ENST00000505005 SH3RF3Q8TEJ3 882 aaPredicted RBP11.83□□□□□ -0.52
NR1I3-220ENST00000505005 ZNF384Q8TF68 577 aa11.83□□□□□ -0.52
NR1I3-220ENST00000505005 WNK4Q96J92 1243 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms