RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 AGXT2Q9BYV1 514 aa12.37□□□□□ -0.43
TPM3-217ENST00000504663 CTNNA3Q9UI47 895 aa12.37□□□□□ -0.43
TPM3-217ENST00000504663 ZNRF3Q9ULT6 936 aa12.37□□□□□ -0.43
TPM3-217ENST00000504663 F8W031 263 aaPredicted RBP12.36□□□□□ -0.43
TPM3-217ENST00000504663 WDHD1O75717 1129 aaPredicted RBP12.36□□□□□ -0.43
TPM3-217ENST00000504663 RAD17O75943 681 aa12.36□□□□□ -0.43
TPM3-217ENST00000504663 CYP2D6P10635 497 aa12.36□□□□□ -0.43
TPM3-217ENST00000504663 YBX3P16989 372 aaKnown RBP eCLIP12.36□□□□□ -0.43
TPM3-217ENST00000504663 CRKP46108 304 aa12.36□□□□□ -0.43
TPM3-217ENST00000504663 SCNN1DP51172 638 aa12.36□□□□□ -0.43
TPM3-217ENST00000504663 HDLBPQ00341 1268 aaKnown RBP12.36□□□□□ -0.43
TPM3-217ENST00000504663 CTDSPL2Q05D32 466 aa12.36□□□□□ -0.43
TPM3-217ENST00000504663 CXCL9Q07325 125 aa12.36□□□□□ -0.43
TPM3-217ENST00000504663 IMMTQ16891 758 aaKnown RBP12.36□□□□□ -0.43
TPM3-217ENST00000504663 SBK1Q52WX2 424 aa12.36□□□□□ -0.43
TPM3-217ENST00000504663 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
TPM3-217ENST00000504663 FBXW7Q969H0 707 aa12.36□□□□□ -0.43
TPM3-217ENST00000504663 ZBED3Q96IU2 234 aaPredicted RBP12.36□□□□□ -0.43
TPM3-217ENST00000504663 ZDHHC15Q96MV8 337 aa12.36□□□□□ -0.43
TPM3-217ENST00000504663 CRNKL1Q9BZJ0 848 aaKnown RBP12.36□□□□□ -0.43
TPM3-217ENST00000504663 NAPBQ9H115 298 aa12.36□□□□□ -0.43
TPM3-217ENST00000504663 DDX4Q9NQI0 724 aaKnown RBP12.36□□□□□ -0.43
TPM3-217ENST00000504663 INCENPQ9NQS7 918 aa12.36□□□□□ -0.43
TPM3-217ENST00000504663 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.36□□□□□ -0.43
TPM3-217ENST00000504663 FLT1P17948 1338 aa12.36□□□□□ -0.43
TPM3-217ENST00000504663 FZD9O00144 591 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 ST18O60284 1047 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 PPARAQ07869 468 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 CUL4AQ13619 759 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 CDC42EP5Q6NZY7 148 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 BLOC1S2Q6QNY1 142 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 CYB5R4Q7L1T6 521 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 KIAA0825Q8IV33 1275 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 HSCBQ8IWL3 235 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 NIM1KQ8IY84 436 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 FBXL16Q8N461 479 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 IL27Q8NEV9 243 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 TMX3Q96JJ7 454 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 ATP8A2Q9NTI2 1148 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 CYP46A1Q9Y6A2 500 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 MYO3BQ8WXR4 1341 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 ZNF541Q9H0D2 1346 aa12.35□□□□□ -0.43
TPM3-217ENST00000504663 COL2A1P02458 1487 aaPredicted RBP12.34□□□□□ -0.43
TPM3-217ENST00000504663 G3V3G9 751 aa12.34□□□□□ -0.43
TPM3-217ENST00000504663 ZNF213O14771 459 aa12.34□□□□□ -0.43
TPM3-217ENST00000504663 APPP05067 770 aa12.34□□□□□ -0.43
TPM3-217ENST00000504663 USP17L8P0C7I0 530 aa12.34□□□□□ -0.43
TPM3-217ENST00000504663 PSMA5P28066 241 aa12.34□□□□□ -0.43
TPM3-217ENST00000504663 TDO2P48775 406 aa12.34□□□□□ -0.43
TPM3-217ENST00000504663 BECN1Q14457 450 aa12.34□□□□□ -0.43
TPM3-217ENST00000504663 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
TPM3-217ENST00000504663 TEKT1Q969V4 418 aa12.34□□□□□ -0.43
TPM3-217ENST00000504663 GPHNQ9NQX3 736 aaPredicted RBP12.34□□□□□ -0.43
TPM3-217ENST00000504663 PDRG1Q9NUG6 133 aa12.34□□□□□ -0.43
TPM3-217ENST00000504663 SERPINA10Q9UK55 444 aa12.34□□□□□ -0.43
TPM3-217ENST00000504663 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
TPM3-217ENST00000504663 WDR19Q8NEZ3 1342 aa12.34□□□□□ -0.43
TPM3-217ENST00000504663 UTRNP46939 3433 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 MYH8P13535 1937 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 USP17L12C9JPN9 530 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 USP17L21D6R901 530 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 BAG3O95817 575 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 NFIAQ12857 509 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 AKNAD1Q5T1N1 836 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 C12orf60Q5U649 245 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 DHX32Q7L7V1 743 aaKnown RBP12.33□□□□□ -0.44
TPM3-217ENST00000504663 CERS3Q8IU89 383 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 MAPKAPK5Q8IW41 473 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 SLF2Q8IX21 1173 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 TEX11Q8IYF3 940 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 LRRC2Q9BYS8 371 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 NACAP1Q9BZK3 213 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 ARPP21Q9UBL0 812 aaPredicted RBP12.33□□□□□ -0.44
TPM3-217ENST00000504663 TPCN1Q9ULQ1 816 aa12.33□□□□□ -0.44
TPM3-217ENST00000504663 SRCAPQ6ZRS2 3230 aa12.32□□□□□ -0.44
TPM3-217ENST00000504663 MCM2P49736 904 aa12.32□□□□□ -0.44
TPM3-217ENST00000504663 PLCD1P51178 756 aa12.32□□□□□ -0.44
TPM3-217ENST00000504663 EVCP57679 992 aa12.32□□□□□ -0.44
TPM3-217ENST00000504663 ME3Q16798 604 aa12.32□□□□□ -0.44
TPM3-217ENST00000504663 CFAP100Q494V2 611 aa12.32□□□□□ -0.44
TPM3-217ENST00000504663 CIAPIN1Q6FI81 312 aa12.32□□□□□ -0.44
TPM3-217ENST00000504663 Q6ZUG5 572 aa12.32□□□□□ -0.44
TPM3-217ENST00000504663 MTMR14Q8NCE2 650 aa12.32□□□□□ -0.44
TPM3-217ENST00000504663 AGBL3Q8NEM8 1001 aa12.32□□□□□ -0.44
TPM3-217ENST00000504663 TGFBRAP1Q8WUH2 860 aa12.32□□□□□ -0.44
TPM3-217ENST00000504663 LARP6Q9BRS8 491 aaKnown RBP12.32□□□□□ -0.44
TPM3-217ENST00000504663 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
TPM3-217ENST00000504663 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
TPM3-217ENST00000504663 B4E1Z4 1266 aa12.31□□□□□ -0.44
TPM3-217ENST00000504663 SH2B2O14492 632 aaPredicted RBP12.31□□□□□ -0.44
TPM3-217ENST00000504663 ORC4O43929 436 aa12.31□□□□□ -0.44
TPM3-217ENST00000504663 HMGB1P09429 215 aaKnown RBP12.31□□□□□ -0.44
TPM3-217ENST00000504663 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
TPM3-217ENST00000504663 PLCG2P16885 1265 aa12.31□□□□□ -0.44
TPM3-217ENST00000504663 ZNF280AP59817 542 aaPredicted RBP12.31□□□□□ -0.44
TPM3-217ENST00000504663 GABPAQ06546 454 aa12.31□□□□□ -0.44
TPM3-217ENST00000504663 NOL8Q76FK4 1167 aaKnown RBP12.31□□□□□ -0.44
TPM3-217ENST00000504663 SH3BP5LQ7L8J4 393 aa12.31□□□□□ -0.44
TPM3-217ENST00000504663 CHST3Q7LGC8 479 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms