RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
USP17L28-201ENST00000504543 DEFB129Q9H1M3 183 aa12.16□□□□□ -0.46
USP17L28-201ENST00000504543 TDRD3Q9H7E2 651 aaKnown RBP12.16□□□□□ -0.46
USP17L28-201ENST00000504543 PIH1D3Q9NQM4 214 aaKnown RBP12.16□□□□□ -0.46
USP17L28-201ENST00000504543 HELLSQ9NRZ9 838 aa12.16□□□□□ -0.46
USP17L28-201ENST00000504543 SNX14Q9Y5W7 946 aa12.16□□□□□ -0.46
USP17L28-201ENST00000504543 COL2A1P02458 1487 aaPredicted RBP12.15□□□□□ -0.46
USP17L28-201ENST00000504543 HSP90AA1P07900 732 aaKnown RBP12.15□□□□□ -0.46
USP17L28-201ENST00000504543 NEK4P51957 841 aa12.15□□□□□ -0.46
USP17L28-201ENST00000504543 PTH1RQ03431 593 aa12.15□□□□□ -0.46
USP17L28-201ENST00000504543 NBR1Q14596 966 aa12.15□□□□□ -0.46
USP17L28-201ENST00000504543 NECTIN1Q15223 517 aa12.15□□□□□ -0.46
USP17L28-201ENST00000504543 SUPT20HL1Q3ZLR7 823 aa12.15□□□□□ -0.46
USP17L28-201ENST00000504543 ZSCAN25Q6NSZ9 544 aa12.15□□□□□ -0.46
USP17L28-201ENST00000504543 CDC42EP5Q6NZY7 148 aa12.15□□□□□ -0.46
USP17L28-201ENST00000504543 EDC3Q96F86 508 aaKnown RBP12.15□□□□□ -0.46
USP17L28-201ENST00000504543 CDCA5Q96FF9 252 aa12.15□□□□□ -0.46
USP17L28-201ENST00000504543 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.15□□□□□ -0.46
USP17L28-201ENST00000504543 PCDHAC2Q9Y5I4 1007 aa12.15□□□□□ -0.46
USP17L28-201ENST00000504543 GOLIM4O00461 696 aa12.14□□□□□ -0.47
USP17L28-201ENST00000504543 ZFYP08048 801 aaPredicted RBP12.14□□□□□ -0.47
USP17L28-201ENST00000504543 NF2P35240 595 aa12.14□□□□□ -0.47
USP17L28-201ENST00000504543 RHBDL3P58872 404 aa12.14□□□□□ -0.47
USP17L28-201ENST00000504543 UBE3CQ15386 1083 aa12.14□□□□□ -0.47
USP17L28-201ENST00000504543 MCMDC2Q4G0Z9 681 aa12.14□□□□□ -0.47
USP17L28-201ENST00000504543 RNF20Q5VTR2 975 aa12.14□□□□□ -0.47
USP17L28-201ENST00000504543 CST9Q5W186 159 aa12.14□□□□□ -0.47
USP17L28-201ENST00000504543 FAM151AQ8WW52 585 aa12.14□□□□□ -0.47
USP17L28-201ENST00000504543 NOL10Q9BSC4 688 aaKnown RBP12.14□□□□□ -0.47
USP17L28-201ENST00000504543 RBM8AQ9Y5S9 174 aaKnown RBP12.14□□□□□ -0.47
USP17L28-201ENST00000504543 PAPPA2Q9BXP8 1791 aa12.14□□□□□ -0.47
USP17L28-201ENST00000504543 ADM5C9JUS6 153 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 TRAF5O00463 557 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 IDH1O75874 414 aaKnown RBP12.13□□□□□ -0.47
USP17L28-201ENST00000504543 ZKSCAN1P17029 563 aaPredicted RBP12.13□□□□□ -0.47
USP17L28-201ENST00000504543 BTDP43251 543 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 RASA3Q14644 834 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 MAP3K11Q16584 847 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 TSGA10IPQ3SY00 556 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 ZMYM1Q5SVZ6 1142 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 ZNF589Q86UQ0 364 aaPredicted RBP12.13□□□□□ -0.47
USP17L28-201ENST00000504543 C2orf69Q8N8R5 385 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 CWC22Q9HCG8 908 aaKnown RBP12.13□□□□□ -0.47
USP17L28-201ENST00000504543 USP40Q9NVE5 1235 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 TAOK2Q9UL54 1235 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 TLL2Q9Y6L7 1015 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 CLRN2A0PK11 232 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 RASSF10A6NK89 507 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 CELF2O95319 508 aaKnown RBP12.13□□□□□ -0.47
USP17L28-201ENST00000504543 CUL4AQ13619 759 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 CREB3L3Q68CJ9 461 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 TEPSINQ96N21 525 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 TTC14Q96N46 770 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 VEZTQ9HBM0 779 aa12.13□□□□□ -0.47
USP17L28-201ENST00000504543 GBA2Q9HCG7 927 aaPredicted RBP12.13□□□□□ -0.47
USP17L28-201ENST00000504543 CNTNAP1P78357 1384 aa12.12□□□□□ -0.47
USP17L28-201ENST00000504543 ATRNL1Q5VV63 1379 aa12.12□□□□□ -0.47
USP17L28-201ENST00000504543 TCRBV5S4A2TA0A5A2 114 aa12.12□□□□□ -0.47
USP17L28-201ENST00000504543 RNF113AO15541 343 aaKnown RBP12.12□□□□□ -0.47
USP17L28-201ENST00000504543 WDHD1O75717 1129 aaPredicted RBP12.12□□□□□ -0.47
USP17L28-201ENST00000504543 PDE6AP16499 860 aa12.12□□□□□ -0.47
USP17L28-201ENST00000504543 CYP7A1P22680 504 aa12.12□□□□□ -0.47
USP17L28-201ENST00000504543 ADD2P35612 726 aa12.12□□□□□ -0.47
USP17L28-201ENST00000504543 MAP3K10Q02779 954 aa12.12□□□□□ -0.47
USP17L28-201ENST00000504543 SLC9C2Q5TAH2 1124 aa12.12□□□□□ -0.47
USP17L28-201ENST00000504543 MAGEB6Q8N7X4 407 aa12.12□□□□□ -0.47
USP17L28-201ENST00000504543 SPRYD3Q8NCJ5 442 aa12.12□□□□□ -0.47
USP17L28-201ENST00000504543 INTS4Q96HW7 963 aaKnown RBP12.12□□□□□ -0.47
USP17L28-201ENST00000504543 DSCC1Q9BVC3 393 aa12.12□□□□□ -0.47
USP17L28-201ENST00000504543 NDUFB9Q9Y6M9 179 aa12.12□□□□□ -0.47
USP17L28-201ENST00000504543 U3KPZ7 1027 aaPredicted RBP12.12□□□□□ -0.47
USP17L28-201ENST00000504543 FOCADQ5VW36 1801 aa12.11□□□□□ -0.47
USP17L28-201ENST00000504543 SLC27A2O14975 620 aa12.11□□□□□ -0.47
USP17L28-201ENST00000504543 PSMA5P28066 241 aa12.11□□□□□ -0.47
USP17L28-201ENST00000504543 KRT32Q14532 448 aa12.11□□□□□ -0.47
USP17L28-201ENST00000504543 RAB3GAP1Q15042 981 aa12.11□□□□□ -0.47
USP17L28-201ENST00000504543 VPS53Q5VIR6 699 aa12.11□□□□□ -0.47
USP17L28-201ENST00000504543 SAPCD2Q86UD0 394 aa12.11□□□□□ -0.47
USP17L28-201ENST00000504543 TMX3Q96JJ7 454 aa12.11□□□□□ -0.47
USP17L28-201ENST00000504543 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
USP17L28-201ENST00000504543 FAM198AQ9UFP1 575 aa12.11□□□□□ -0.47
USP17L28-201ENST00000504543 PPP1R12BO60237 982 aaPredicted RBP12.1□□□□□ -0.47
USP17L28-201ENST00000504543 LDLRAD1Q5T700 205 aa12.1□□□□□ -0.47
USP17L28-201ENST00000504543 ADGRA1Q86SQ6 560 aa12.1□□□□□ -0.47
USP17L28-201ENST00000504543 RIOK1Q9BRS2 568 aaKnown RBP12.1□□□□□ -0.47
USP17L28-201ENST00000504543 UPF3BQ9BZI7 483 aaKnown RBP12.1□□□□□ -0.47
USP17L28-201ENST00000504543 ALDH8A1Q9H2A2 487 aaPredicted RBP12.1□□□□□ -0.47
USP17L28-201ENST00000504543 DHX36Q9H2U1 1008 aaKnown RBP12.1□□□□□ -0.47
USP17L28-201ENST00000504543 TCP10L2B9ZVM9 353 aa12.09□□□□□ -0.47
USP17L28-201ENST00000504543 TBC1D12O60347 775 aa12.09□□□□□ -0.47
USP17L28-201ENST00000504543 CASTP20810 708 aaKnown RBP12.09□□□□□ -0.47
USP17L28-201ENST00000504543 NUCB2P80303 420 aa12.09□□□□□ -0.47
USP17L28-201ENST00000504543 DCAF15Q66K64 600 aa12.09□□□□□ -0.47
USP17L28-201ENST00000504543 ARMC9Q7Z3E5 817 aa12.09□□□□□ -0.47
USP17L28-201ENST00000504543 DNAJC5GQ8N7S2 189 aa12.09□□□□□ -0.47
USP17L28-201ENST00000504543 APPBP2Q92624 585 aa12.09□□□□□ -0.47
USP17L28-201ENST00000504543 CYP46A1Q9Y6A2 500 aa12.09□□□□□ -0.47
USP17L28-201ENST00000504543 CDK5RAP2Q96SN8 1893 aa12.09□□□□□ -0.47
USP17L28-201ENST00000504543 SSC5DA1L4H1 1573 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms