RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 CARD11Q9BXL7 1154 aa6.92□□□□□ -1.3
OTUD4-204ENST00000504331 KRTAP4-11Q9BYQ6 195 aa6.92□□□□□ -1.3
OTUD4-204ENST00000504331 RNF114Q9Y508 228 aa6.92□□□□□ -1.3
OTUD4-204ENST00000504331 A0A1W2PP64 1363 aa6.92□□□□□ -1.3
OTUD4-204ENST00000504331 MEGF6O75095 1541 aa6.91□□□□□ -1.3
OTUD4-204ENST00000504331 MLLT1Q03111 559 aaPredicted RBP6.91□□□□□ -1.3
OTUD4-204ENST00000504331 AMOTQ4VCS5 1084 aa6.91□□□□□ -1.3
OTUD4-204ENST00000504331 TTLL6Q8N841 843 aa6.91□□□□□ -1.3
OTUD4-204ENST00000504331 LINC00116Q8NCU8 138 aa6.91□□□□□ -1.3
OTUD4-204ENST00000504331 ITGB4P16144 1822 aa6.91□□□□□ -1.3
OTUD4-204ENST00000504331 SBF1O95248 1867 aa6.91□□□□□ -1.3
OTUD4-204ENST00000504331 BRCA1P38398 1863 aaKnown RBP6.91□□□□□ -1.3
OTUD4-204ENST00000504331 KDM6AO15550 1401 aaPredicted RBP6.91□□□□□ -1.3
OTUD4-204ENST00000504331 MAP2P11137 1827 aaKnown RBP6.9□□□□□ -1.3
OTUD4-204ENST00000504331 FYB1O15117 783 aa6.9□□□□□ -1.3
OTUD4-204ENST00000504331 CA12O43570 354 aa6.9□□□□□ -1.3
OTUD4-204ENST00000504331 CDK11BP21127 795 aaKnown RBP6.9□□□□□ -1.3
OTUD4-204ENST00000504331 MCCD1P59942 119 aaPredicted RBP6.9□□□□□ -1.3
OTUD4-204ENST00000504331 LCE4AQ5TA78 99 aa6.9□□□□□ -1.3
OTUD4-204ENST00000504331 OAS3Q9Y6K5 1087 aaKnown RBP6.9□□□□□ -1.3
OTUD4-204ENST00000504331 WASHC2AQ641Q2 1341 aa6.9□□□□□ -1.3
OTUD4-204ENST00000504331 KCPQ6ZWJ8 1503 aa6.9□□□□□ -1.31
OTUD4-204ENST00000504331 TMEM88BA6NKF7 163 aa6.89□□□□□ -1.31
OTUD4-204ENST00000504331 H0YIN7 160 aa6.89□□□□□ -1.31
OTUD4-204ENST00000504331 APBB1O00213 710 aa6.89□□□□□ -1.31
OTUD4-204ENST00000504331 TM4SF1P30408 202 aa6.89□□□□□ -1.31
OTUD4-204ENST00000504331 SSTR4P31391 388 aa6.89□□□□□ -1.31
OTUD4-204ENST00000504331 ADH7P40394 386 aa6.89□□□□□ -1.31
OTUD4-204ENST00000504331 NR1H3Q13133 447 aa6.89□□□□□ -1.31
OTUD4-204ENST00000504331 PNMA8AQ86V59 439 aaPredicted RBP6.89□□□□□ -1.31
OTUD4-204ENST00000504331 NIFKQ9BYG3 293 aaKnown RBP6.89□□□□□ -1.31
OTUD4-204ENST00000504331 ATG3Q9NT62 314 aa6.89□□□□□ -1.31
OTUD4-204ENST00000504331 LTBP3Q9NS15 1303 aa6.89□□□□□ -1.31
OTUD4-204ENST00000504331 CNTNAP1P78357 1384 aa6.89□□□□□ -1.31
OTUD4-204ENST00000504331 NCAPD2Q15021 1401 aa6.89□□□□□ -1.31
OTUD4-204ENST00000504331 C4AP0C0L4 1744 aa6.89□□□□□ -1.31
OTUD4-204ENST00000504331 PKD1L3Q7Z443 1732 aa6.89□□□□□ -1.31
OTUD4-204ENST00000504331 N4BP2Q86UW6 1770 aaPredicted RBP6.88□□□□□ -1.31
OTUD4-204ENST00000504331 HSP90B1P14625 803 aaKnown RBP6.88□□□□□ -1.31
OTUD4-204ENST00000504331 PHKG2P15735 406 aa6.88□□□□□ -1.31
OTUD4-204ENST00000504331 PDE6BP35913 854 aa6.88□□□□□ -1.31
OTUD4-204ENST00000504331 ECE1P42892 770 aa6.88□□□□□ -1.31
OTUD4-204ENST00000504331 CD97P48960 835 aa6.88□□□□□ -1.31
OTUD4-204ENST00000504331 JAG1P78504 1218 aa6.88□□□□□ -1.31
OTUD4-204ENST00000504331 ITPK1Q13572 414 aa6.88□□□□□ -1.31
OTUD4-204ENST00000504331 PLEKHO1Q53GL0 409 aaPredicted RBP6.88□□□□□ -1.31
OTUD4-204ENST00000504331 LDHDQ86WU2 507 aa6.88□□□□□ -1.31
OTUD4-204ENST00000504331 SLC30A3Q99726 388 aa6.88□□□□□ -1.31
OTUD4-204ENST00000504331 KRTAP17-1Q9BYP8 105 aa6.88□□□□□ -1.31
OTUD4-204ENST00000504331 ASAP1Q9ULH1 1129 aa6.88□□□□□ -1.31
OTUD4-204ENST00000504331 USP42Q9H9J4 1324 aaKnown RBP6.87□□□□□ -1.31
OTUD4-204ENST00000504331 RFC5P40937 340 aa6.87□□□□□ -1.31
OTUD4-204ENST00000504331 SCNN1DP51172 638 aa6.87□□□□□ -1.31
OTUD4-204ENST00000504331 HTRA3P83110 453 aa6.87□□□□□ -1.31
OTUD4-204ENST00000504331 DEFB115Q30KQ5 88 aa6.87□□□□□ -1.31
OTUD4-204ENST00000504331 HSP90AB2PQ58FF8 381 aa6.87□□□□□ -1.31
OTUD4-204ENST00000504331 ABHD8Q96I13 439 aa6.87□□□□□ -1.31
OTUD4-204ENST00000504331 ZDHHC3Q9NYG2 299 aa6.87□□□□□ -1.31
OTUD4-204ENST00000504331 KIAA1551Q9HCM1 1747 aa6.87□□□□□ -1.31
OTUD4-204ENST00000504331 TOGARAM1Q9Y4F4 1720 aa6.87□□□□□ -1.31
OTUD4-204ENST00000504331 A0A087WZG4 1122 aa6.86□□□□□ -1.31
OTUD4-204ENST00000504331 RASSF10A6NK89 507 aa6.86□□□□□ -1.31
OTUD4-204ENST00000504331 POLRMTO00411 1230 aaKnown RBP6.86□□□□□ -1.31
OTUD4-204ENST00000504331 FOXN1O15353 648 aa6.86□□□□□ -1.31
OTUD4-204ENST00000504331 GPR37L1O60883 481 aa6.86□□□□□ -1.31
OTUD4-204ENST00000504331 CABP4P57796 275 aa6.86□□□□□ -1.31
OTUD4-204ENST00000504331 RRS1Q15050 365 aaKnown RBP6.86□□□□□ -1.31
OTUD4-204ENST00000504331 AMIGO3Q86WK7 504 aa6.86□□□□□ -1.31
OTUD4-204ENST00000504331 TEX13AQ9BXU3 409 aaPredicted RBP6.86□□□□□ -1.31
OTUD4-204ENST00000504331 C1orf115Q9H7X2 142 aa6.86□□□□□ -1.31
OTUD4-204ENST00000504331 KDRP35968 1356 aa6.85□□□□□ -1.31
OTUD4-204ENST00000504331 PASKQ96RG2 1323 aa6.85□□□□□ -1.31
OTUD4-204ENST00000504331 MAP2K2P36507 400 aa6.85□□□□□ -1.31
OTUD4-204ENST00000504331 BRIP1Q9BX63 1249 aa6.85□□□□□ -1.31
OTUD4-204ENST00000504331 NARFQ9UHQ1 456 aa6.85□□□□□ -1.31
OTUD4-204ENST00000504331 GJA3Q9Y6H8 435 aa6.85□□□□□ -1.31
OTUD4-204ENST00000504331 USP3Q9Y6I4 520 aa6.85□□□□□ -1.31
OTUD4-204ENST00000504331 DICER1Q9UPY3 1922 aaKnown RBP6.85□□□□□ -1.31
OTUD4-204ENST00000504331 SCN4AP35499 1836 aa6.85□□□□□ -1.31
OTUD4-204ENST00000504331 RGPD2P0DJD1 1756 aa6.85□□□□□ -1.31
OTUD4-204ENST00000504331 ST20-MTHFSA0A0A6YYL1 179 aa6.84□□□□□ -1.31
OTUD4-204ENST00000504331 RAD21O60216 631 aa6.84□□□□□ -1.31
OTUD4-204ENST00000504331 LILRB5O75023 590 aa6.84□□□□□ -1.31
OTUD4-204ENST00000504331 CRKLP46109 303 aaKnown RBP6.84□□□□□ -1.31
OTUD4-204ENST00000504331 MTHFSP49914 203 aa6.84□□□□□ -1.31
OTUD4-204ENST00000504331 TSGA10IPQ3SY00 556 aa6.84□□□□□ -1.31
OTUD4-204ENST00000504331 C1orf141Q5JVX7 400 aa6.84□□□□□ -1.31
OTUD4-204ENST00000504331 RAB44Q7Z6P3 723 aaPredicted RBP6.84□□□□□ -1.31
OTUD4-204ENST00000504331 USHBP1Q8N6Y0 703 aa6.84□□□□□ -1.31
OTUD4-204ENST00000504331 ZNF592Q92610 1267 aa6.84□□□□□ -1.31
OTUD4-204ENST00000504331 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
OTUD4-204ENST00000504331 MKRN1Q9UHC7 482 aaKnown RBP6.84□□□□□ -1.31
OTUD4-204ENST00000504331 IQSEC3Q9UPP2 1182 aaPredicted RBP6.84□□□□□ -1.31
OTUD4-204ENST00000504331 MED26O95402 600 aa6.83□□□□□ -1.32
OTUD4-204ENST00000504331 INHAP05111 366 aa6.83□□□□□ -1.32
OTUD4-204ENST00000504331 SERPINB2P05120 415 aa6.83□□□□□ -1.32
OTUD4-204ENST00000504331 LBX1P52954 281 aa6.83□□□□□ -1.32
OTUD4-204ENST00000504331 RAC1P63000 192 aa6.83□□□□□ -1.32
OTUD4-204ENST00000504331 SFSWAPQ12872 951 aaKnown RBP6.83□□□□□ -1.32
OTUD4-204ENST00000504331 FLIIQ13045 1269 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms