RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 MXD3Q9BW11 206 aa17.86■□□□□ 0.45
SGCA-204ENST00000504073 KRT23Q9C075 422 aa17.86■□□□□ 0.45
SGCA-204ENST00000504073 USP40Q9NVE5 1235 aa17.86■□□□□ 0.45
SGCA-204ENST00000504073 DICER1Q9UPY3 1922 aaKnown RBP17.86■□□□□ 0.45
SGCA-204ENST00000504073 PRKAB2O43741 272 aa17.85■□□□□ 0.45
SGCA-204ENST00000504073 POLR3DP05423 398 aaPredicted RBP17.85■□□□□ 0.45
SGCA-204ENST00000504073 PPARAQ07869 468 aa17.85■□□□□ 0.45
SGCA-204ENST00000504073 CFAP100Q494V2 611 aa17.85■□□□□ 0.45
SGCA-204ENST00000504073 SBK1Q52WX2 424 aa17.85■□□□□ 0.45
SGCA-204ENST00000504073 MFSD6Q6ZSS7 791 aa17.85■□□□□ 0.45
SGCA-204ENST00000504073 RUFY3Q7L099 469 aa17.85■□□□□ 0.45
SGCA-204ENST00000504073 RASEFQ8IZ41 740 aa17.85■□□□□ 0.45
SGCA-204ENST00000504073 DPF2Q92785 391 aa17.85■□□□□ 0.45
SGCA-204ENST00000504073 KIF2CQ99661 725 aa17.85■□□□□ 0.45
SGCA-204ENST00000504073 ZSWIM6Q9HCJ5 1215 aa17.85■□□□□ 0.45
SGCA-204ENST00000504073 DCP1AQ9NPI6 582 aaPredicted RBP17.85■□□□□ 0.45
SGCA-204ENST00000504073 MCM9Q9NXL9 1143 aa17.85■□□□□ 0.45
SGCA-204ENST00000504073 MINDY4BA8MYZ0 360 aa17.84■□□□□ 0.45
SGCA-204ENST00000504073 E7EWF7 191 aa17.84■□□□□ 0.45
SGCA-204ENST00000504073 HAND2P61296 217 aa17.84■□□□□ 0.45
SGCA-204ENST00000504073 PDE4BQ07343 736 aa17.84■□□□□ 0.45
SGCA-204ENST00000504073 TTC6Q86TZ1 520 aa17.84■□□□□ 0.45
SGCA-204ENST00000504073 TGFBRAP1Q8WUH2 860 aa17.84■□□□□ 0.45
SGCA-204ENST00000504073 EPB41L4AQ9HCS5 686 aaPredicted RBP17.84■□□□□ 0.45
SGCA-204ENST00000504073 RNF181Q9P0P0 153 aa17.84■□□□□ 0.45
SGCA-204ENST00000504073 ANAPC4Q9UJX5 808 aa17.84■□□□□ 0.45
SGCA-204ENST00000504073 TAOK2Q9UL54 1235 aa17.84■□□□□ 0.45
SGCA-204ENST00000504073 GJA3Q9Y6H8 435 aa17.84■□□□□ 0.45
SGCA-204ENST00000504073 LAMA4Q16363 1823 aa17.84■□□□□ 0.45
SGCA-204ENST00000504073 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.44
SGCA-204ENST00000504073 H7C1D1 291 aa17.83■□□□□ 0.44
SGCA-204ENST00000504073 NPM3O75607 178 aaKnown RBP17.83■□□□□ 0.44
SGCA-204ENST00000504073 HLA-DOAP06340 250 aa17.83■□□□□ 0.44
SGCA-204ENST00000504073 AKNAD1Q5T1N1 836 aa17.83■□□□□ 0.44
SGCA-204ENST00000504073 C9orf131Q5VYM1 1079 aa17.83■□□□□ 0.44
SGCA-204ENST00000504073 GPC2Q8N158 579 aa17.83■□□□□ 0.44
SGCA-204ENST00000504073 MTMR14Q8NCE2 650 aa17.83■□□□□ 0.44
SGCA-204ENST00000504073 CHMP4CQ96CF2 233 aa17.83■□□□□ 0.44
SGCA-204ENST00000504073 GMLQ99445 158 aa17.83■□□□□ 0.44
SGCA-204ENST00000504073 TOMM22Q9NS69 142 aa17.83■□□□□ 0.44
SGCA-204ENST00000504073 PDRG1Q9NUG6 133 aa17.83■□□□□ 0.44
SGCA-204ENST00000504073 USP17L12C9JPN9 530 aa17.82■□□□□ 0.44
SGCA-204ENST00000504073 USP17L21D6R901 530 aa17.82■□□□□ 0.44
SGCA-204ENST00000504073 FOXP2O15409 715 aa17.82■□□□□ 0.44
SGCA-204ENST00000504073 HSP90AA1P07900 732 aaKnown RBP17.82■□□□□ 0.44
SGCA-204ENST00000504073 MCM5P33992 734 aa17.82■□□□□ 0.44
SGCA-204ENST00000504073 RHBDL3P58872 404 aa17.82■□□□□ 0.44
SGCA-204ENST00000504073 SART3Q15020 963 aaKnown RBP17.82■□□□□ 0.44
SGCA-204ENST00000504073 APOBEC3HQ6NTF7 200 aaKnown RBP17.82■□□□□ 0.44
SGCA-204ENST00000504073 DPY19L2Q6NUT2 758 aa17.82■□□□□ 0.44
SGCA-204ENST00000504073 DHX32Q7L7V1 743 aaKnown RBP17.82■□□□□ 0.44
SGCA-204ENST00000504073 STAG1Q8WVM7 1258 aa17.82■□□□□ 0.44
SGCA-204ENST00000504073 COL4A5P29400 1685 aa17.82■□□□□ 0.44
SGCA-204ENST00000504073 NAV1Q8NEY1 1877 aa17.82■□□□□ 0.44
SGCA-204ENST00000504073 ZNF646O15015 1829 aaPredicted RBP17.82■□□□□ 0.44
SGCA-204ENST00000504073 WDR19Q8NEZ3 1342 aa17.81■□□□□ 0.44
SGCA-204ENST00000504073 RPS6KB1P23443 525 aa17.81■□□□□ 0.44
SGCA-204ENST00000504073 LMOD1P29536 600 aaPredicted RBP17.81■□□□□ 0.44
SGCA-204ENST00000504073 CDC42EP5Q6NZY7 148 aa17.81■□□□□ 0.44
SGCA-204ENST00000504073 MAPKAPK5Q8IW41 473 aa17.81■□□□□ 0.44
SGCA-204ENST00000504073 ESR2Q92731 530 aa17.81■□□□□ 0.44
SGCA-204ENST00000504073 UPF3BQ9BZI7 483 aaKnown RBP17.81■□□□□ 0.44
SGCA-204ENST00000504073 DHX36Q9H2U1 1008 aaKnown RBP17.81■□□□□ 0.44
SGCA-204ENST00000504073 ZBTB12Q9Y330 459 aaPredicted RBP17.81■□□□□ 0.44
SGCA-204ENST00000504073 FLT1P17948 1338 aa17.8■□□□□ 0.44
SGCA-204ENST00000504073 ERICH2A1L162 156 aa17.8■□□□□ 0.44
SGCA-204ENST00000504073 SPDYE2BA6NHP3 402 aa17.8■□□□□ 0.44
SGCA-204ENST00000504073 K7ELQ4 463 aaPredicted RBP17.8■□□□□ 0.44
SGCA-204ENST00000504073 ENTPD3O75355 529 aa17.8■□□□□ 0.44
SGCA-204ENST00000504073 SPDYE6P0CI01 402 aa17.8■□□□□ 0.44
SGCA-204ENST00000504073 TNNI2P48788 182 aa17.8■□□□□ 0.44
SGCA-204ENST00000504073 CTR9Q6PD62 1173 aa17.8■□□□□ 0.44
SGCA-204ENST00000504073 ZSCAN31Q96LW9 406 aaPredicted RBP17.8■□□□□ 0.44
SGCA-204ENST00000504073 MTA3Q9BTC8 594 aa17.8■□□□□ 0.44
SGCA-204ENST00000504073 IDI2Q9BXS1 227 aa17.8■□□□□ 0.44
SGCA-204ENST00000504073 TRIM34Q9BYJ4 488 aa17.8■□□□□ 0.44
SGCA-204ENST00000504073 ALDH8A1Q9H2A2 487 aaPredicted RBP17.8■□□□□ 0.44
SGCA-204ENST00000504073 RRAGCQ9HB90 399 aa17.8■□□□□ 0.44
SGCA-204ENST00000504073 SBF1O95248 1867 aa17.8■□□□□ 0.44
SGCA-204ENST00000504073 GMPSP49915 693 aaPredicted RBP17.79■□□□□ 0.44
SGCA-204ENST00000504073 ZNF280AP59817 542 aaPredicted RBP17.79■□□□□ 0.44
SGCA-204ENST00000504073 PICALMQ13492 652 aa17.79■□□□□ 0.44
SGCA-204ENST00000504073 TNFAIP1Q13829 316 aa17.79■□□□□ 0.44
SGCA-204ENST00000504073 ADCK5Q3MIX3 580 aa17.79■□□□□ 0.44
SGCA-204ENST00000504073 CCDC178Q5BJE1 867 aa17.79■□□□□ 0.44
SGCA-204ENST00000504073 C12orf60Q5U649 245 aa17.79■□□□□ 0.44
SGCA-204ENST00000504073 FKBP1CQ5VVH2 108 aa17.79■□□□□ 0.44
SGCA-204ENST00000504073 MYOZ2Q9NPC6 264 aa17.79■□□□□ 0.44
SGCA-204ENST00000504073 LAMB1P07942 1786 aa17.79■□□□□ 0.44
SGCA-204ENST00000504073 BAZ2AQ9UIF9 1905 aaKnown RBP17.78■□□□□ 0.44
SGCA-204ENST00000504073 TIAM2Q8IVF5 1701 aa17.78■□□□□ 0.44
SGCA-204ENST00000504073 MICALL2Q8IY33 904 aa17.78■□□□□ 0.44
SGCA-204ENST00000504073 TMEM87BQ96K49 555 aa17.78■□□□□ 0.44
SGCA-204ENST00000504073 MKNK2Q9HBH9 465 aa17.78■□□□□ 0.44
SGCA-204ENST00000504073 CNOT7Q9UIV1 285 aaKnown RBP17.78■□□□□ 0.44
SGCA-204ENST00000504073 FOCADQ5VW36 1801 aa17.77■□□□□ 0.44
SGCA-204ENST00000504073 ECM29Q5VYK3 1845 aa17.77■□□□□ 0.44
SGCA-204ENST00000504073 MYH1P12882 1939 aa17.77■□□□□ 0.44
SGCA-204ENST00000504073 CTDSPL2Q05D32 466 aa17.77■□□□□ 0.44
SGCA-204ENST00000504073 RRP12Q5JTH9 1297 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms