RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 CDK5RAP2Q96SN8 1893 aa13.41□□□□□ -0.26
VCAN-205ENST00000503923 FOCADQ5VW36 1801 aa13.41□□□□□ -0.26
VCAN-205ENST00000503923 FLT1P17948 1338 aa13.4□□□□□ -0.26
VCAN-205ENST00000503923 PPP1R12BO60237 982 aaPredicted RBP13.4□□□□□ -0.26
VCAN-205ENST00000503923 GSPT1P15170 499 aaKnown RBP13.4□□□□□ -0.26
VCAN-205ENST00000503923 CDAN1Q8IWY9 1227 aa13.4□□□□□ -0.26
VCAN-205ENST00000503923 ZFPM1Q8IX07 1006 aa13.4□□□□□ -0.26
VCAN-205ENST00000503923 OSBP2Q969R2 916 aa13.4□□□□□ -0.26
VCAN-205ENST00000503923 PUS7LQ9H0K6 701 aaKnown RBP13.4□□□□□ -0.26
VCAN-205ENST00000503923 ARMT1Q9H993 441 aa13.4□□□□□ -0.26
VCAN-205ENST00000503923 COL2A1P02458 1487 aaPredicted RBP13.4□□□□□ -0.26
VCAN-205ENST00000503923 PAPPA2Q9BXP8 1791 aa13.4□□□□□ -0.26
VCAN-205ENST00000503923 HIP1O00291 1037 aa13.39□□□□□ -0.27
VCAN-205ENST00000503923 TTLL12Q14166 644 aaPredicted RBP13.39□□□□□ -0.27
VCAN-205ENST00000503923 ZMYM1Q5SVZ6 1142 aa13.39□□□□□ -0.27
VCAN-205ENST00000503923 DCAF15Q66K64 600 aa13.39□□□□□ -0.27
VCAN-205ENST00000503923 ARMC9Q7Z3E5 817 aa13.39□□□□□ -0.27
VCAN-205ENST00000503923 MAPKAPK5Q8IW41 473 aa13.39□□□□□ -0.27
VCAN-205ENST00000503923 ZSCAN29Q8IWY8 852 aaPredicted RBP13.39□□□□□ -0.27
VCAN-205ENST00000503923 DHX36Q9H2U1 1008 aaKnown RBP13.39□□□□□ -0.27
VCAN-205ENST00000503923 ABT1Q9ULW3 272 aaKnown RBP13.39□□□□□ -0.27
VCAN-205ENST00000503923 TLL2Q9Y6L7 1015 aa13.39□□□□□ -0.27
VCAN-205ENST00000503923 ATRNL1Q5VV63 1379 aa13.39□□□□□ -0.27
VCAN-205ENST00000503923 SSC5DA1L4H1 1573 aa13.39□□□□□ -0.27
VCAN-205ENST00000503923 DDTLA6NHG4 134 aaPredicted RBP13.38□□□□□ -0.27
VCAN-205ENST00000503923 M0R2C6 588 aa13.38□□□□□ -0.27
VCAN-205ENST00000503923 GPAA1O43292 621 aa13.38□□□□□ -0.27
VCAN-205ENST00000503923 SDSP20132 328 aa13.38□□□□□ -0.27
VCAN-205ENST00000503923 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
VCAN-205ENST00000503923 SAPCD2Q86UD0 394 aa13.38□□□□□ -0.27
VCAN-205ENST00000503923 SKAP1Q86WV1 359 aa13.38□□□□□ -0.27
VCAN-205ENST00000503923 CSRNP1Q96S65 589 aa13.38□□□□□ -0.27
VCAN-205ENST00000503923 STRBPQ96SI9 672 aaKnown RBP13.38□□□□□ -0.27
VCAN-205ENST00000503923 HELLSQ9NRZ9 838 aa13.38□□□□□ -0.27
VCAN-205ENST00000503923 GNAT2P19087 354 aa13.37□□□□□ -0.27
VCAN-205ENST00000503923 IREB2P48200 963 aaKnown RBP13.37□□□□□ -0.27
VCAN-205ENST00000503923 HUNKP57058 714 aa13.37□□□□□ -0.27
VCAN-205ENST00000503923 PRKG1Q13976 671 aa13.37□□□□□ -0.27
VCAN-205ENST00000503923 MAP3K11Q16584 847 aa13.37□□□□□ -0.27
VCAN-205ENST00000503923 SDR42E1Q8WUS8 393 aa13.37□□□□□ -0.27
VCAN-205ENST00000503923 DDRGK1Q96HY6 314 aa13.37□□□□□ -0.27
VCAN-205ENST00000503923 HHIPL1Q96JK4 782 aa13.37□□□□□ -0.27
VCAN-205ENST00000503923 SEC62Q99442 399 aaKnown RBP13.37□□□□□ -0.27
VCAN-205ENST00000503923 DIAPH3Q9NSV4 1193 aa13.37□□□□□ -0.27
VCAN-205ENST00000503923 ATP8A2Q9NTI2 1148 aa13.37□□□□□ -0.27
VCAN-205ENST00000503923 ANGEL1Q9UNK9 670 aaKnown RBP13.37□□□□□ -0.27
VCAN-205ENST00000503923 SLC4A4Q9Y6R1 1079 aa13.37□□□□□ -0.27
VCAN-205ENST00000503923 NAV1Q8NEY1 1877 aa13.36□□□□□ -0.27
VCAN-205ENST00000503923 PRKAB2O43741 272 aa13.36□□□□□ -0.27
VCAN-205ENST00000503923 USP2O75604 605 aaPredicted RBP13.36□□□□□ -0.27
VCAN-205ENST00000503923 HLA-DOAP06340 250 aa13.36□□□□□ -0.27
VCAN-205ENST00000503923 HTRA3P83110 453 aa13.36□□□□□ -0.27
VCAN-205ENST00000503923 NMIQ13287 307 aaPredicted RBP13.36□□□□□ -0.27
VCAN-205ENST00000503923 MCMDC2Q4G0Z9 681 aa13.36□□□□□ -0.27
VCAN-205ENST00000503923 MOB2Q70IA6 237 aa13.36□□□□□ -0.27
VCAN-205ENST00000503923 MIGA2Q7L4E1 593 aa13.36□□□□□ -0.27
VCAN-205ENST00000503923 FAM227BQ96M60 508 aa13.36□□□□□ -0.27
VCAN-205ENST00000503923 ZNF341Q9BYN7 854 aa13.36□□□□□ -0.27
VCAN-205ENST00000503923 DCP1AQ9NPI6 582 aaPredicted RBP13.36□□□□□ -0.27
VCAN-205ENST00000503923 PI4KBQ9UBF8 816 aa13.36□□□□□ -0.27
VCAN-205ENST00000503923 MKRN1Q9UHC7 482 aaKnown RBP13.36□□□□□ -0.27
VCAN-205ENST00000503923 SAP30BPQ9UHR5 308 aaKnown RBP13.36□□□□□ -0.27
VCAN-205ENST00000503923 MYH1P12882 1939 aa13.36□□□□□ -0.27
VCAN-205ENST00000503923 A0A0D9SFI3 127 aa13.35□□□□□ -0.27
VCAN-205ENST00000503923 UNCXA6NJT0 531 aa13.35□□□□□ -0.27
VCAN-205ENST00000503923 RASSF10A6NK89 507 aa13.35□□□□□ -0.27
VCAN-205ENST00000503923 UBE2Q2LH0YL09 131 aa13.35□□□□□ -0.27
VCAN-205ENST00000503923 TBC1D12O60347 775 aa13.35□□□□□ -0.27
VCAN-205ENST00000503923 POLR3DP05423 398 aaPredicted RBP13.35□□□□□ -0.27
VCAN-205ENST00000503923 DEFB115Q30KQ5 88 aa13.35□□□□□ -0.27
VCAN-205ENST00000503923 BMP2KLQ5H9B9 411 aa13.35□□□□□ -0.27
VCAN-205ENST00000503923 GIMAP6Q6P9H5 292 aa13.35□□□□□ -0.27
VCAN-205ENST00000503923 TTC6Q86TZ1 520 aa13.35□□□□□ -0.27
VCAN-205ENST00000503923 MCM9Q9NXL9 1143 aa13.35□□□□□ -0.27
VCAN-205ENST00000503923 PALD1Q9ULE6 856 aa13.35□□□□□ -0.27
VCAN-205ENST00000503923 FZD1Q9UP38 647 aa13.35□□□□□ -0.27
VCAN-205ENST00000503923 DDX60LQ5H9U9 1706 aaKnown RBP13.34□□□□□ -0.27
VCAN-205ENST00000503923 PATL2C9JE40 543 aaKnown RBP13.34□□□□□ -0.27
VCAN-205ENST00000503923 MFAP1P55081 439 aaKnown RBP13.34□□□□□ -0.27
VCAN-205ENST00000503923 MAP3K10Q02779 954 aa13.34□□□□□ -0.27
VCAN-205ENST00000503923 LDLRAD1Q5T700 205 aa13.34□□□□□ -0.27
VCAN-205ENST00000503923 CWC27Q6UX04 472 aaKnown RBP13.34□□□□□ -0.27
VCAN-205ENST00000503923 CCDC129Q6ZRS4 1044 aa13.34□□□□□ -0.27
VCAN-205ENST00000503923 FOXP4Q8IVH2 680 aaPredicted RBP13.34□□□□□ -0.27
VCAN-205ENST00000503923 AMOTL1Q8IY63 956 aa13.34□□□□□ -0.27
VCAN-205ENST00000503923 ANKRD13AQ8IZ07 590 aa13.34□□□□□ -0.27
VCAN-205ENST00000503923 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.34□□□□□ -0.27
VCAN-205ENST00000503923 KLRG1Q96E93 195 aa13.34□□□□□ -0.27
VCAN-205ENST00000503923 HERC5Q9UII4 1024 aaKnown RBP13.34□□□□□ -0.27
VCAN-205ENST00000503923 GSG1L2A8MUP6 293 aa13.33□□□□□ -0.28
VCAN-205ENST00000503923 APPP05067 770 aa13.33□□□□□ -0.28
VCAN-205ENST00000503923 MAP3K9P80192 1104 aa13.33□□□□□ -0.28
VCAN-205ENST00000503923 RGMBQ6NW40 437 aa13.33□□□□□ -0.28
VCAN-205ENST00000503923 PAXIP1Q6ZW49 1069 aaPredicted RBP13.33□□□□□ -0.28
VCAN-205ENST00000503923 METTL16Q86W50 562 aaKnown RBP13.33□□□□□ -0.28
VCAN-205ENST00000503923 CRACR2BQ8N4Y2 399 aaPredicted RBP13.33□□□□□ -0.28
VCAN-205ENST00000503923 RUFY2Q8WXA3 655 aa13.33□□□□□ -0.28
VCAN-205ENST00000503923 WRNIP1Q96S55 665 aa13.33□□□□□ -0.28
VCAN-205ENST00000503923 TRIM34Q9BYJ4 488 aa13.33□□□□□ -0.28
VCAN-205ENST00000503923 NACAP1Q9BZK3 213 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms