RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 SCYL3Q8IZE3 742 aa19.92■□□□□ 0.78
PDLIM7-210ENST00000503827 ALDH1L1O75891 902 aa19.91■□□□□ 0.78
PDLIM7-210ENST00000503827 ZEB1P37275 1124 aaPredicted RBP19.91■□□□□ 0.78
PDLIM7-210ENST00000503827 NFIAQ12857 509 aa19.91■□□□□ 0.78
PDLIM7-210ENST00000503827 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.91■□□□□ 0.78
PDLIM7-210ENST00000503827 WDR66Q8TBY9 1149 aa19.91■□□□□ 0.78
PDLIM7-210ENST00000503827 SUCLG2Q96I99 432 aa19.91■□□□□ 0.78
PDLIM7-210ENST00000503827 UBE2OQ9C0C9 1292 aaKnown RBP19.91■□□□□ 0.78
PDLIM7-210ENST00000503827 PRKRIP1Q9H875 184 aaPredicted RBP19.91■□□□□ 0.78
PDLIM7-210ENST00000503827 PHIPQ8WWQ0 1821 aa19.9■□□□□ 0.78
PDLIM7-210ENST00000503827 DOCK1Q14185 1865 aa19.9■□□□□ 0.78
PDLIM7-210ENST00000503827 PTPRAP18433 802 aa19.9■□□□□ 0.78
PDLIM7-210ENST00000503827 LRRC24Q50LG9 513 aa19.9■□□□□ 0.78
PDLIM7-210ENST00000503827 ANKRD13CQ8N6S4 541 aa19.9■□□□□ 0.78
PDLIM7-210ENST00000503827 C11orf49Q9H6J7 331 aa19.9■□□□□ 0.78
PDLIM7-210ENST00000503827 DAGLAQ9Y4D2 1042 aa19.9■□□□□ 0.78
PDLIM7-210ENST00000503827 AFG3L2Q9Y4W6 797 aa19.9■□□□□ 0.78
PDLIM7-210ENST00000503827 HMGCRP04035 888 aa19.89■□□□□ 0.77
PDLIM7-210ENST00000503827 IFIT1P09914 478 aaKnown RBP19.89■□□□□ 0.77
PDLIM7-210ENST00000503827 VGLL2Q8N8G2 317 aa19.89■□□□□ 0.77
PDLIM7-210ENST00000503827 KAZALD1Q96I82 304 aa19.89■□□□□ 0.77
PDLIM7-210ENST00000503827 KIF16BQ96L93 1317 aa19.89■□□□□ 0.77
PDLIM7-210ENST00000503827 SRCIN1Q9C0H9 1055 aa19.89■□□□□ 0.77
PDLIM7-210ENST00000503827 HMX1Q9NP08 348 aaPredicted RBP19.89■□□□□ 0.77
PDLIM7-210ENST00000503827 USP40Q9NVE5 1235 aa19.89■□□□□ 0.77
PDLIM7-210ENST00000503827 FANCIQ9NVI1 1328 aa19.89■□□□□ 0.77
PDLIM7-210ENST00000503827 FAM198AQ9UFP1 575 aa19.89■□□□□ 0.77
PDLIM7-210ENST00000503827 RPTORQ8N122 1335 aa19.88■□□□□ 0.77
PDLIM7-210ENST00000503827 PHF20L1A8MW92 1017 aa19.88■□□□□ 0.77
PDLIM7-210ENST00000503827 SLC4A10Q6U841 1118 aa19.88■□□□□ 0.77
PDLIM7-210ENST00000503827 PNMA3Q9UL41 463 aa19.88■□□□□ 0.77
PDLIM7-210ENST00000503827 DIXDC1Q155Q3 683 aa19.87■□□□□ 0.77
PDLIM7-210ENST00000503827 FAM110CQ1W6H9 321 aa19.87■□□□□ 0.77
PDLIM7-210ENST00000503827 AGTPBP1Q9UPW5 1226 aa19.87■□□□□ 0.77
PDLIM7-210ENST00000503827 LRRFIP2Q9Y608 721 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-210ENST00000503827 PUM3Q15397 648 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-210ENST00000503827 ZFPM1Q8IX07 1006 aa19.86■□□□□ 0.77
PDLIM7-210ENST00000503827 BICC1Q9H694 974 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-210ENST00000503827 MYH2Q9UKX2 1941 aa19.86■□□□□ 0.77
PDLIM7-210ENST00000503827 ATRNL1Q5VV63 1379 aa19.85■□□□□ 0.77
PDLIM7-210ENST00000503827 UNC80Q8N2C7 3258 aa19.85■□□□□ 0.77
PDLIM7-210ENST00000503827 TRIM75PA6NK02 468 aa19.85■□□□□ 0.77
PDLIM7-210ENST00000503827 NBPF7P0C2Y1 421 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-210ENST00000503827 EXOSC9Q06265 439 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-210ENST00000503827 RABL6Q3YEC7 729 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-210ENST00000503827 ZSCAN29Q8IWY8 852 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-210ENST00000503827 CTNND1O60716 968 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-210ENST00000503827 LDHBP07195 334 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-210ENST00000503827 FGFR2P21802 821 aa19.84■□□□□ 0.77
PDLIM7-210ENST00000503827 OGDHLQ9ULD0 1010 aa19.84■□□□□ 0.77
PDLIM7-210ENST00000503827 ENTPD3O75355 529 aa19.83■□□□□ 0.77
PDLIM7-210ENST00000503827 SLC5A1P13866 664 aa19.83■□□□□ 0.77
PDLIM7-210ENST00000503827 PRDX5P30044 214 aa19.83■□□□□ 0.77
PDLIM7-210ENST00000503827 RGS3P49796 1198 aa19.83■□□□□ 0.77
PDLIM7-210ENST00000503827 SPINK5Q9NQ38 1064 aaPredicted RBP19.83■□□□□ 0.77
PDLIM7-210ENST00000503827 UTYO14607 1347 aa19.82■□□□□ 0.76
PDLIM7-210ENST00000503827 PLXNB2O15031 1838 aa19.82■□□□□ 0.76
PDLIM7-210ENST00000503827 GCLCP48506 637 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-210ENST00000503827 MAP3K10Q02779 954 aa19.82■□□□□ 0.76
PDLIM7-210ENST00000503827 TRIM32Q13049 653 aa19.82■□□□□ 0.76
PDLIM7-210ENST00000503827 FAM109BQ6ICB4 259 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-210ENST00000503827 IDI2Q9BXS1 227 aa19.82■□□□□ 0.76
PDLIM7-210ENST00000503827 LOC285556D6RIA3 1793 aa19.81■□□□□ 0.76
PDLIM7-210ENST00000503827 NCBP3Q53F19 620 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-210ENST00000503827 TREML2Q5T2D2 321 aa19.81■□□□□ 0.76
PDLIM7-210ENST00000503827 PROCA1Q8NCQ7 364 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-210ENST00000503827 KLHDC4Q8TBB5 520 aa19.81■□□□□ 0.76
PDLIM7-210ENST00000503827 LPIN2Q92539 896 aa19.81■□□□□ 0.76
PDLIM7-210ENST00000503827 GJD2Q9UKL4 321 aa19.81■□□□□ 0.76
PDLIM7-210ENST00000503827 PFASO15067 1338 aa19.8■□□□□ 0.76
PDLIM7-210ENST00000503827 POTEB2H3BUK9 544 aa19.8■□□□□ 0.76
PDLIM7-210ENST00000503827 PABPC4Q13310 644 aaKnown RBP eCLIP19.8■□□□□ 0.76
PDLIM7-210ENST00000503827 ANKRD44Q8N8A2 993 aa19.8■□□□□ 0.76
PDLIM7-210ENST00000503827 GUCD1Q96NT3 240 aa19.8■□□□□ 0.76
PDLIM7-210ENST00000503827 ATAD5Q96QE3 1844 aa19.79■□□□□ 0.76
PDLIM7-210ENST00000503827 MDM2Q00987 491 aaPredicted RBP19.79■□□□□ 0.76
PDLIM7-210ENST00000503827 SH3BP5LQ7L8J4 393 aa19.79■□□□□ 0.76
PDLIM7-210ENST00000503827 TRIB2Q92519 343 aa19.79■□□□□ 0.76
PDLIM7-210ENST00000503827 GNL3LQ9NVN8 582 aaKnown RBP19.79■□□□□ 0.76
PDLIM7-210ENST00000503827 SALL1Q9NSC2 1324 aa19.78■□□□□ 0.76
PDLIM7-210ENST00000503827 CCDC84Q86UT8 332 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-210ENST00000503827 WDR63Q8IWG1 891 aa19.78■□□□□ 0.76
PDLIM7-210ENST00000503827 FAM161BQ96MY7 647 aa19.78■□□□□ 0.76
PDLIM7-210ENST00000503827 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-210ENST00000503827 DDTLA6NHG4 134 aaPredicted RBP19.77■□□□□ 0.76
PDLIM7-210ENST00000503827 PRKAR2AP13861 404 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-210ENST00000503827 MAP3K21Q5TCX8 1036 aa19.77■□□□□ 0.76
PDLIM7-210ENST00000503827 COL2A1P02458 1487 aaPredicted RBP19.76■□□□□ 0.75
PDLIM7-210ENST00000503827 RFX7Q2KHR2 1363 aa19.76■□□□□ 0.75
PDLIM7-210ENST00000503827 EYA2O00167 538 aa19.76■□□□□ 0.75
PDLIM7-210ENST00000503827 SLURP2P0DP57 97 aa19.76■□□□□ 0.75
PDLIM7-210ENST00000503827 COL6A1P12109 1028 aa19.76■□□□□ 0.75
PDLIM7-210ENST00000503827 CYP2B6P20813 491 aa19.76■□□□□ 0.75
PDLIM7-210ENST00000503827 SPP2Q13103 211 aa19.76■□□□□ 0.75
PDLIM7-210ENST00000503827 ZNF697Q5TEC3 545 aa19.76■□□□□ 0.75
PDLIM7-210ENST00000503827 DENND2AQ9ULE3 1009 aa19.76■□□□□ 0.75
PDLIM7-210ENST00000503827 PICALMQ13492 652 aa19.75■□□□□ 0.75
PDLIM7-210ENST00000503827 LRRC26Q2I0M4 334 aa19.75■□□□□ 0.75
PDLIM7-210ENST00000503827 SLF2Q8IX21 1173 aa19.75■□□□□ 0.75
PDLIM7-210ENST00000503827 ZGPATQ8N5A5 531 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms