RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 MPRIPQ6WCQ1 1025 aa9.3□□□□□ -0.92
PTCD2-206ENST00000503315 KIAA0825Q8IV33 1275 aa9.3□□□□□ -0.92
PTCD2-206ENST00000503315 IFT43Q96FT9 208 aa9.3□□□□□ -0.92
PTCD2-206ENST00000503315 RNPC3Q96LT9 517 aaKnown RBP9.3□□□□□ -0.92
PTCD2-206ENST00000503315 ZNF408Q9H9D4 720 aa9.3□□□□□ -0.92
PTCD2-206ENST00000503315 MAP3K5Q99683 1374 aa9.29□□□□□ -0.92
PTCD2-206ENST00000503315 CDC45O75419 566 aa9.29□□□□□ -0.92
PTCD2-206ENST00000503315 PWP1Q13610 501 aa9.29□□□□□ -0.92
PTCD2-206ENST00000503315 EIF4A2Q14240 407 aaKnown RBP9.29□□□□□ -0.92
PTCD2-206ENST00000503315 RTN1Q16799 776 aa9.29□□□□□ -0.92
PTCD2-206ENST00000503315 PLEKHG6Q3KR16 790 aa9.29□□□□□ -0.92
PTCD2-206ENST00000503315 MEI1Q5TIA1 1274 aa9.29□□□□□ -0.92
PTCD2-206ENST00000503315 POTEEQ6S8J3 1075 aa9.29□□□□□ -0.92
PTCD2-206ENST00000503315 ANKS3Q6ZW76 656 aa9.29□□□□□ -0.92
PTCD2-206ENST00000503315 ERMP1Q7Z2K6 904 aa9.29□□□□□ -0.92
PTCD2-206ENST00000503315 COL23A1Q86Y22 540 aaPredicted RBP9.29□□□□□ -0.92
PTCD2-206ENST00000503315 CCAR1Q8IX12 1150 aaKnown RBP9.29□□□□□ -0.92
PTCD2-206ENST00000503315 ETFBKMTQ8IXQ9 262 aa9.29□□□□□ -0.92
PTCD2-206ENST00000503315 IRF2BPLQ9H1B7 796 aa9.29□□□□□ -0.92
PTCD2-206ENST00000503315 MAP4K5Q9Y4K4 846 aa9.29□□□□□ -0.92
PTCD2-206ENST00000503315 C4BP0C0L5 1744 aa9.28□□□□□ -0.92
PTCD2-206ENST00000503315 USP17L7P0C7H9 530 aa9.28□□□□□ -0.92
PTCD2-206ENST00000503315 HMGB2P26583 209 aaKnown RBP9.28□□□□□ -0.92
PTCD2-206ENST00000503315 TNNT2P45379 298 aaPredicted RBP9.28□□□□□ -0.92
PTCD2-206ENST00000503315 NASPP49321 788 aaPredicted RBP9.28□□□□□ -0.92
PTCD2-206ENST00000503315 MTFR1Q15390 333 aa9.28□□□□□ -0.92
PTCD2-206ENST00000503315 GPR152Q8TDT2 470 aa9.28□□□□□ -0.92
PTCD2-206ENST00000503315 PIGBQ92521 554 aa9.28□□□□□ -0.92
PTCD2-206ENST00000503315 DDX56Q9NY93 547 aaKnown RBP9.28□□□□□ -0.92
PTCD2-206ENST00000503315 ZNF232Q9UNY5 417 aa9.28□□□□□ -0.92
PTCD2-206ENST00000503315 FAN1Q9Y2M0 1017 aa9.28□□□□□ -0.92
PTCD2-206ENST00000503315 VIRMAQ69YN4 1812 aaKnown RBP9.27□□□□□ -0.93
PTCD2-206ENST00000503315 IFNL2Q8IZJ0 200 aa9.27□□□□□ -0.93
PTCD2-206ENST00000503315 PRPF38AQ8NAV1 312 aaKnown RBP9.27□□□□□ -0.93
PTCD2-206ENST00000503315 CPLX3Q8WVH0 158 aa9.27□□□□□ -0.93
PTCD2-206ENST00000503315 DEPDC7Q96QD5 511 aa9.27□□□□□ -0.93
PTCD2-206ENST00000503315 SLC6A16Q9GZN6 736 aa9.27□□□□□ -0.93
PTCD2-206ENST00000503315 PALLDQ8WX93 1383 aa9.27□□□□□ -0.93
PTCD2-206ENST00000503315 IGSF1Q8N6C5 1336 aa9.26□□□□□ -0.93
PTCD2-206ENST00000503315 CCDC194A0A1B0GVG4 234 aa9.26□□□□□ -0.93
PTCD2-206ENST00000503315 PHKG2P15735 406 aa9.26□□□□□ -0.93
PTCD2-206ENST00000503315 POLD1P28340 1107 aa9.26□□□□□ -0.93
PTCD2-206ENST00000503315 BCAMP50895 628 aa9.26□□□□□ -0.93
PTCD2-206ENST00000503315 ARSHQ5FYA8 562 aa9.26□□□□□ -0.93
PTCD2-206ENST00000503315 FAM26DQ5JW98 314 aa9.26□□□□□ -0.93
PTCD2-206ENST00000503315 LRP10Q7Z4F1 713 aa9.26□□□□□ -0.93
PTCD2-206ENST00000503315 ALDH16A1Q8IZ83 802 aa9.26□□□□□ -0.93
PTCD2-206ENST00000503315 APPBP2Q92624 585 aa9.26□□□□□ -0.93
PTCD2-206ENST00000503315 SMARCC1Q92922 1105 aaPredicted RBP9.26□□□□□ -0.93
PTCD2-206ENST00000503315 CCDC74AQ96AQ1 378 aa9.26□□□□□ -0.93
PTCD2-206ENST00000503315 OSBPL7Q9BZF2 842 aa9.26□□□□□ -0.93
PTCD2-206ENST00000503315 SNTG2Q9NY99 539 aa9.26□□□□□ -0.93
PTCD2-206ENST00000503315 CDK2AP1O14519 115 aa9.25□□□□□ -0.93
PTCD2-206ENST00000503315 RAB33AQ14088 237 aa9.25□□□□□ -0.93
PTCD2-206ENST00000503315 TLR1Q15399 786 aa9.25□□□□□ -0.93
PTCD2-206ENST00000503315 RELL1Q8IUW5 271 aa9.25□□□□□ -0.93
PTCD2-206ENST00000503315 KBTBD4Q9NVX7 518 aa9.25□□□□□ -0.93
PTCD2-206ENST00000503315 G3BP2Q9UN86 482 aaKnown RBP9.25□□□□□ -0.93
PTCD2-206ENST00000503315 PLEKHG2Q9H7P9 1386 aa9.25□□□□□ -0.93
PTCD2-206ENST00000503315 ZNF831Q5JPB2 1677 aa9.25□□□□□ -0.93
PTCD2-206ENST00000503315 TLL1O43897 1013 aa9.24□□□□□ -0.93
PTCD2-206ENST00000503315 PEX14O75381 377 aa9.24□□□□□ -0.93
PTCD2-206ENST00000503315 HIRAP54198 1017 aaPredicted RBP9.24□□□□□ -0.93
PTCD2-206ENST00000503315 SH3BP2P78314 561 aa9.24□□□□□ -0.93
PTCD2-206ENST00000503315 DIEXFQ68CQ4 756 aaKnown RBP9.24□□□□□ -0.93
PTCD2-206ENST00000503315 AMIGO3Q86WK7 504 aa9.24□□□□□ -0.93
PTCD2-206ENST00000503315 TREML1Q86YW5 311 aa9.24□□□□□ -0.93
PTCD2-206ENST00000503315 FLAD1Q8NFF5 587 aa9.24□□□□□ -0.93
PTCD2-206ENST00000503315 NOC4LQ9BVI4 516 aaKnown RBP9.24□□□□□ -0.93
PTCD2-206ENST00000503315 COPRSQ9NQ92 184 aa9.24□□□□□ -0.93
PTCD2-206ENST00000503315 FANCLQ9NW38 375 aa9.24□□□□□ -0.93
PTCD2-206ENST00000503315 ASAP1Q9ULH1 1129 aa9.24□□□□□ -0.93
PTCD2-206ENST00000503315 MYH14Q7Z406 1995 aaKnown RBP9.24□□□□□ -0.93
PTCD2-206ENST00000503315 SCN11AQ9UI33 1791 aa9.24□□□□□ -0.93
PTCD2-206ENST00000503315 LOC102724428A0A0B4J2F2 783 aa9.23□□□□□ -0.93
PTCD2-206ENST00000503315 MAP4K4O95819 1239 aaPredicted RBP9.23□□□□□ -0.93
PTCD2-206ENST00000503315 VARSP26640 1264 aaKnown RBP9.23□□□□□ -0.93
PTCD2-206ENST00000503315 SIK1P57059 783 aa9.23□□□□□ -0.93
PTCD2-206ENST00000503315 COL9A2Q14055 689 aaPredicted RBP9.23□□□□□ -0.93
PTCD2-206ENST00000503315 MORC1Q86VD1 984 aa9.23□□□□□ -0.93
PTCD2-206ENST00000503315 HOMER1Q86YM7 354 aa9.23□□□□□ -0.93
PTCD2-206ENST00000503315 NLGN2Q8NFZ4 835 aa9.23□□□□□ -0.93
PTCD2-206ENST00000503315 CEP89Q96ST8 783 aa9.23□□□□□ -0.93
PTCD2-206ENST00000503315 ATG3Q9NT62 314 aa9.23□□□□□ -0.93
PTCD2-206ENST00000503315 TMOD3Q9NYL9 352 aa9.23□□□□□ -0.93
PTCD2-206ENST00000503315 KLK14Q9P0G3 267 aa9.23□□□□□ -0.93
PTCD2-206ENST00000503315 EFR3BQ9Y2G0 817 aa9.23□□□□□ -0.93
PTCD2-206ENST00000503315 HCN4Q9Y3Q4 1203 aa9.23□□□□□ -0.93
PTCD2-206ENST00000503315 KNSTRNQ9Y448 316 aa9.23□□□□□ -0.93
PTCD2-206ENST00000503315 MRVI1Q9Y6F6 885 aa9.23□□□□□ -0.93
PTCD2-206ENST00000503315 COL5A3P25940 1745 aaPredicted RBP9.23□□□□□ -0.93
PTCD2-206ENST00000503315 ERVV-2B6SEH9 535 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 WNT7BP56706 349 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 IFRD2Q12894 506 aaPredicted RBP9.22□□□□□ -0.93
PTCD2-206ENST00000503315 TEAD4Q15561 434 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 GPR162Q16538 588 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 RSRP1Q9BUV0 290 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 TYW1Q9NV66 732 aaKnown RBP9.22□□□□□ -0.93
PTCD2-206ENST00000503315 HCSTQ9UBK5 93 aa9.22□□□□□ -0.93
PTCD2-206ENST00000503315 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms