RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 TDRD3Q9H7E2 651 aaKnown RBP18.11■□□□□ 0.49
MBD4-204ENST00000503197 TACC3Q9Y6A5 838 aa18.11■□□□□ 0.49
MBD4-204ENST00000503197 E7EWF7 191 aa18.1■□□□□ 0.49
MBD4-204ENST00000503197 MMP14P50281 582 aa18.1■□□□□ 0.49
MBD4-204ENST00000503197 NFIAQ12857 509 aa18.1■□□□□ 0.49
MBD4-204ENST00000503197 RABEP1Q15276 862 aa18.1■□□□□ 0.49
MBD4-204ENST00000503197 JAKMIP1Q96N16 626 aaKnown RBP18.1■□□□□ 0.49
MBD4-204ENST00000503197 UPF3BQ9BZI7 483 aaKnown RBP18.1■□□□□ 0.49
MBD4-204ENST00000503197 MYOZ2Q9NPC6 264 aa18.1■□□□□ 0.49
MBD4-204ENST00000503197 CNOT7Q9UIV1 285 aaKnown RBP18.1■□□□□ 0.49
MBD4-204ENST00000503197 DDNO94850 711 aaPredicted RBP18.1■□□□□ 0.49
MBD4-204ENST00000503197 CACNB3P54284 484 aa18.1■□□□□ 0.49
MBD4-204ENST00000503197 CTDSPL2Q05D32 466 aa18.1■□□□□ 0.49
MBD4-204ENST00000503197 PPARAQ07869 468 aa18.1■□□□□ 0.49
MBD4-204ENST00000503197 SBK1Q52WX2 424 aa18.1■□□□□ 0.49
MBD4-204ENST00000503197 TM6SF1Q9BZW5 370 aa18.1■□□□□ 0.49
MBD4-204ENST00000503197 MCM9Q9NXL9 1143 aa18.1■□□□□ 0.49
MBD4-204ENST00000503197 ANAPC4Q9UJX5 808 aa18.1■□□□□ 0.49
MBD4-204ENST00000503197 MYH1P12882 1939 aa18.09■□□□□ 0.49
MBD4-204ENST00000503197 MINDY4BA8MYZ0 360 aa18.09■□□□□ 0.49
MBD4-204ENST00000503197 CYP2D6P10635 497 aa18.09■□□□□ 0.49
MBD4-204ENST00000503197 CPA1P15085 419 aa18.09■□□□□ 0.49
MBD4-204ENST00000503197 KRT32Q14532 448 aa18.09■□□□□ 0.49
MBD4-204ENST00000503197 DDRGK1Q96HY6 314 aa18.09■□□□□ 0.49
MBD4-204ENST00000503197 ZSWIM6Q9HCJ5 1215 aa18.09■□□□□ 0.49
MBD4-204ENST00000503197 WNT10BO00744 389 aa18.08■□□□□ 0.49
MBD4-204ENST00000503197 CASTP20810 708 aaKnown RBP18.08■□□□□ 0.49
MBD4-204ENST00000503197 PICALMQ13492 652 aa18.08■□□□□ 0.49
MBD4-204ENST00000503197 NBPF9Q3BBW0 867 aa18.08■□□□□ 0.49
MBD4-204ENST00000503197 IDI2Q9BXS1 227 aa18.08■□□□□ 0.49
MBD4-204ENST00000503197 INCENPQ9NQS7 918 aa18.08■□□□□ 0.49
MBD4-204ENST00000503197 GPRC5DQ9NZD1 345 aa18.08■□□□□ 0.49
MBD4-204ENST00000503197 ARPP21Q9UBL0 812 aaPredicted RBP18.08■□□□□ 0.49
MBD4-204ENST00000503197 FAM198AQ9UFP1 575 aa18.08■□□□□ 0.49
MBD4-204ENST00000503197 SAP30BPQ9UHR5 308 aaKnown RBP18.08■□□□□ 0.49
MBD4-204ENST00000503197 CD2BP2O95400 341 aaKnown RBP18.08■□□□□ 0.48
MBD4-204ENST00000503197 ANP32AP39687 249 aaKnown RBP18.08■□□□□ 0.48
MBD4-204ENST00000503197 SLC4A8Q2Y0W8 1093 aa18.08■□□□□ 0.48
MBD4-204ENST00000503197 C12orf60Q5U649 245 aa18.08■□□□□ 0.48
MBD4-204ENST00000503197 SAMD7Q7Z3H4 446 aa18.08■□□□□ 0.48
MBD4-204ENST00000503197 NKX2-3Q8TAU0 364 aa18.08■□□□□ 0.48
MBD4-204ENST00000503197 NEK4P51957 841 aa18.07■□□□□ 0.48
MBD4-204ENST00000503197 ZFPM1Q8IX07 1006 aa18.07■□□□□ 0.48
MBD4-204ENST00000503197 NEK1Q96PY6 1258 aa18.07■□□□□ 0.48
MBD4-204ENST00000503197 CLRN2A0PK11 232 aa18.07■□□□□ 0.48
MBD4-204ENST00000503197 PLCD1P51178 756 aa18.07■□□□□ 0.48
MBD4-204ENST00000503197 SPDYE2Q495Y8 402 aa18.07■□□□□ 0.48
MBD4-204ENST00000503197 OSBPL5Q9H0X9 879 aaPredicted RBP18.07■□□□□ 0.48
MBD4-204ENST00000503197 ZNF70Q9UC06 446 aaPredicted RBP18.07■□□□□ 0.48
MBD4-204ENST00000503197 NEDD4P46934 1319 aa18.06■□□□□ 0.48
MBD4-204ENST00000503197 ZC3H4Q9UPT8 1303 aaKnown RBP18.06■□□□□ 0.48
MBD4-204ENST00000503197 NPM3O75607 178 aaKnown RBP18.06■□□□□ 0.48
MBD4-204ENST00000503197 PSMA5P28066 241 aa18.06■□□□□ 0.48
MBD4-204ENST00000503197 AKNAD1Q5T1N1 836 aa18.06■□□□□ 0.48
MBD4-204ENST00000503197 RBM26Q5T8P6 1007 aaKnown RBP18.06■□□□□ 0.48
MBD4-204ENST00000503197 RUFY3Q7L099 469 aa18.06■□□□□ 0.48
MBD4-204ENST00000503197 EPS15P42566 896 aa18.05■□□□□ 0.48
MBD4-204ENST00000503197 TBC1D10BQ4KMP7 808 aaPredicted RBP18.05■□□□□ 0.48
MBD4-204ENST00000503197 STK11IPQ8N1F8 1099 aa18.05■□□□□ 0.48
MBD4-204ENST00000503197 STAG1Q8WVM7 1258 aa18.05■□□□□ 0.48
MBD4-204ENST00000503197 TTC14Q96N46 770 aa18.05■□□□□ 0.48
MBD4-204ENST00000503197 CYP46A1Q9Y6A2 500 aa18.05■□□□□ 0.48
MBD4-204ENST00000503197 ROBO3Q96MS0 1386 aa18.05■□□□□ 0.48
MBD4-204ENST00000503197 TCP10Q12799 353 aa18.05■□□□□ 0.48
MBD4-204ENST00000503197 BLOC1S2Q6QNY1 142 aa18.05■□□□□ 0.48
MBD4-204ENST00000503197 H7C1D1 291 aa18.04■□□□□ 0.48
MBD4-204ENST00000503197 POLR3DP05423 398 aaPredicted RBP18.04■□□□□ 0.48
MBD4-204ENST00000503197 FGRP09769 529 aa18.04■□□□□ 0.48
MBD4-204ENST00000503197 RPS6KB1P23443 525 aa18.04■□□□□ 0.48
MBD4-204ENST00000503197 MB21D2Q8IYB1 491 aaPredicted RBP18.04■□□□□ 0.48
MBD4-204ENST00000503197 KIF4BQ2VIQ3 1234 aa18.03■□□□□ 0.48
MBD4-204ENST00000503197 MFSD6Q6ZSS7 791 aa18.03■□□□□ 0.48
MBD4-204ENST00000503197 SH3BP5LQ7L8J4 393 aa18.03■□□□□ 0.48
MBD4-204ENST00000503197 TRPM4Q8TD43 1214 aa18.03■□□□□ 0.48
MBD4-204ENST00000503197 DYNLL2Q96FJ2 89 aa18.03■□□□□ 0.48
MBD4-204ENST00000503197 TCEANC2Q96MN5 208 aa18.03■□□□□ 0.48
MBD4-204ENST00000503197 SIPA1L1O43166 1804 aa18.03■□□□□ 0.48
MBD4-204ENST00000503197 ASTN2O75129 1339 aaPredicted RBP18.03■□□□□ 0.48
MBD4-204ENST00000503197 CNTNAP1P78357 1384 aa18.03■□□□□ 0.48
MBD4-204ENST00000503197 EXOSC10Q01780 885 aaKnown RBP18.03■□□□□ 0.48
MBD4-204ENST00000503197 DPY19L2Q6NUT2 758 aa18.03■□□□□ 0.48
MBD4-204ENST00000503197 NCOA7Q8NI08 942 aa18.03■□□□□ 0.48
MBD4-204ENST00000503197 SNX21Q969T3 373 aa18.03■□□□□ 0.48
MBD4-204ENST00000503197 L3MBTL3Q96JM7 780 aaPredicted RBP18.03■□□□□ 0.48
MBD4-204ENST00000503197 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.03■□□□□ 0.48
MBD4-204ENST00000503197 DDTLA6NHG4 134 aaPredicted RBP18.02■□□□□ 0.48
MBD4-204ENST00000503197 B4E1Z4 1266 aa18.02■□□□□ 0.48
MBD4-204ENST00000503197 TCP10L2B9ZVM9 353 aa18.02■□□□□ 0.48
MBD4-204ENST00000503197 MYO1BO43795 1136 aa18.02■□□□□ 0.48
MBD4-204ENST00000503197 ENTPD3O75355 529 aa18.02■□□□□ 0.48
MBD4-204ENST00000503197 HMGB1P09429 215 aaKnown RBP18.02■□□□□ 0.48
MBD4-204ENST00000503197 FKBP1CQ5VVH2 108 aa18.02■□□□□ 0.48
MBD4-204ENST00000503197 AMOTL1Q8IY63 956 aa18.02■□□□□ 0.48
MBD4-204ENST00000503197 TBC1D2Q9BYX2 928 aa18.02■□□□□ 0.48
MBD4-204ENST00000503197 TMOD2Q9NZR1 351 aa18.02■□□□□ 0.48
MBD4-204ENST00000503197 COL2A1P02458 1487 aaPredicted RBP18.02■□□□□ 0.47
MBD4-204ENST00000503197 ATRNL1Q5VV63 1379 aa18.02■□□□□ 0.47
MBD4-204ENST00000503197 GLTPD2A6NH11 291 aa18.02■□□□□ 0.47
MBD4-204ENST00000503197 ST18O60284 1047 aa18.02■□□□□ 0.47
MBD4-204ENST00000503197 HIRAP54198 1017 aaPredicted RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms