RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 ELOA2Q8IYF1 753 aaPredicted RBP28.15■■■□□ 2.1
DDX41-202ENST00000503078 INTS13Q9NVM9 706 aa28.15■■■□□ 2.1
DDX41-202ENST00000503078 AKAP11Q9UKA4 1901 aa28.15■■■□□ 2.1
DDX41-202ENST00000503078 CCDC66A2RUB6 948 aa28.15■■■□□ 2.1
DDX41-202ENST00000503078 EFCAB8A8MWE9 144 aa28.15■■■□□ 2.1
DDX41-202ENST00000503078 B4E1Z4 1266 aa28.15■■■□□ 2.1
DDX41-202ENST00000503078 APPP05067 770 aa28.15■■■□□ 2.1
DDX41-202ENST00000503078 TMCO3Q6UWJ1 677 aa28.15■■■□□ 2.1
DDX41-202ENST00000503078 FAM89AQ96GI7 184 aa28.15■■■□□ 2.1
DDX41-202ENST00000503078 NOL10Q9BSC4 688 aaKnown RBP28.15■■■□□ 2.1
DDX41-202ENST00000503078 PPP2R2CQ9Y2T4 447 aa28.15■■■□□ 2.1
DDX41-202ENST00000503078 PAPPAQ13219 1627 aa28.15■■■□□ 2.1
DDX41-202ENST00000503078 VWA3AA6NCI4 1184 aa28.14■■■□□ 2.1
DDX41-202ENST00000503078 METTL24Q5JXM2 366 aa28.14■■■□□ 2.1
DDX41-202ENST00000503078 RANBP6O60518 1105 aaKnown RBP28.14■■■□□ 2.09
DDX41-202ENST00000503078 BMP6P22004 513 aa28.14■■■□□ 2.09
DDX41-202ENST00000503078 PDE4BQ07343 736 aa28.14■■■□□ 2.09
DDX41-202ENST00000503078 TTF1Q15361 905 aaPredicted RBP28.14■■■□□ 2.09
DDX41-202ENST00000503078 IGDCC4Q8TDY8 1250 aa28.14■■■□□ 2.09
DDX41-202ENST00000503078 CARD6Q9BX69 1037 aa28.14■■■□□ 2.09
DDX41-202ENST00000503078 UBN2Q6ZU65 1347 aa28.13■■■□□ 2.09
DDX41-202ENST00000503078 GOLGA8AA7E2F4 631 aa28.13■■■□□ 2.09
DDX41-202ENST00000503078 TPM1P09493 284 aa28.13■■■□□ 2.09
DDX41-202ENST00000503078 TBX2Q13207 712 aaPredicted RBP28.13■■■□□ 2.09
DDX41-202ENST00000503078 UBE3CQ15386 1083 aa28.13■■■□□ 2.09
DDX41-202ENST00000503078 PTPN21Q16825 1174 aa28.13■■■□□ 2.09
DDX41-202ENST00000503078 NFXL1Q6ZNB6 911 aa28.13■■■□□ 2.09
DDX41-202ENST00000503078 KRI1Q8N9T8 703 aaKnown RBP28.13■■■□□ 2.09
DDX41-202ENST00000503078 ZNF512BQ96KM6 892 aaPredicted RBP28.13■■■□□ 2.09
DDX41-202ENST00000503078 MDM2Q00987 491 aaPredicted RBP28.13■■■□□ 2.09
DDX41-202ENST00000503078 MPHOSPH8Q99549 860 aa28.13■■■□□ 2.09
DDX41-202ENST00000503078 FAM217BQ9NTX9 383 aaPredicted RBP28.13■■■□□ 2.09
DDX41-202ENST00000503078 HOOK1Q9UJC3 728 aaKnown RBP28.13■■■□□ 2.09
DDX41-202ENST00000503078 RIPOR2Q9Y4F9 1068 aa28.13■■■□□ 2.09
DDX41-202ENST00000503078 PLA2G4AP47712 749 aa28.12■■■□□ 2.09
DDX41-202ENST00000503078 SGMS1Q86VZ5 419 aa28.12■■■□□ 2.09
DDX41-202ENST00000503078 LY9Q9HBG7 655 aa28.12■■■□□ 2.09
DDX41-202ENST00000503078 GOLGA6L9A6NEM1 432 aa28.11■■■□□ 2.09
DDX41-202ENST00000503078 ZBTB38Q8NAP3 1195 aaPredicted RBP28.11■■■□□ 2.09
DDX41-202ENST00000503078 BAG1Q99933 345 aaPredicted RBP28.11■■■□□ 2.09
DDX41-202ENST00000503078 STK36Q9NRP7 1315 aa28.11■■■□□ 2.09
DDX41-202ENST00000503078 PIH1D3Q9NQM4 214 aaKnown RBP28.11■■■□□ 2.09
DDX41-202ENST00000503078 MAP3K15Q6ZN16 1313 aa28.11■■■□□ 2.09
DDX41-202ENST00000503078 FOXN1O15353 648 aa28.1■■■□□ 2.09
DDX41-202ENST00000503078 TNS2Q63HR2 1409 aa28.1■■■□□ 2.09
DDX41-202ENST00000503078 SSRP1Q08945 709 aaKnown RBP28.1■■■□□ 2.09
DDX41-202ENST00000503078 TMEM67Q5HYA8 995 aa28.1■■■□□ 2.09
DDX41-202ENST00000503078 MAN1B1Q9UKM7 699 aa28.1■■■□□ 2.09
DDX41-202ENST00000503078 ZNF330Q9Y3S2 320 aaPredicted RBP28.1■■■□□ 2.09
DDX41-202ENST00000503078 SOS2Q07890 1332 aaPredicted RBP28.1■■■□□ 2.09
DDX41-202ENST00000503078 STX10O60499 249 aa28.09■■■□□ 2.09
DDX41-202ENST00000503078 IDH1O75874 414 aaKnown RBP28.09■■■□□ 2.09
DDX41-202ENST00000503078 NKX1-1Q15270 411 aaPredicted RBP28.09■■■□□ 2.09
DDX41-202ENST00000503078 LDHAL6AQ6ZMR3 332 aa28.09■■■□□ 2.09
DDX41-202ENST00000503078 NOSTRINQ8IVI9 506 aa28.09■■■□□ 2.09
DDX41-202ENST00000503078 MYL10Q9BUA6 226 aa28.09■■■□□ 2.09
DDX41-202ENST00000503078 SLC26A6Q9BXS9 759 aa28.09■■■□□ 2.09
DDX41-202ENST00000503078 SLAIN2Q9P270 581 aa28.09■■■□□ 2.09
DDX41-202ENST00000503078 ZNF532Q9HCE3 1301 aa28.09■■■□□ 2.09
DDX41-202ENST00000503078 STK11IPQ8N1F8 1099 aa28.09■■■□□ 2.09
DDX41-202ENST00000503078 CASQ1P31415 396 aa28.08■■■□□ 2.09
DDX41-202ENST00000503078 LIFRP42702 1097 aa28.08■■■□□ 2.09
DDX41-202ENST00000503078 FAM177A1Q8N128 213 aaPredicted RBP28.08■■■□□ 2.09
DDX41-202ENST00000503078 UBE2Q2LH0YL09 131 aa28.08■■■□□ 2.09
DDX41-202ENST00000503078 POSTNQ15063 836 aa28.08■■■□□ 2.09
DDX41-202ENST00000503078 SPECC1LQ69YQ0 1117 aa28.08■■■□□ 2.09
DDX41-202ENST00000503078 PDILTQ8N807 584 aa28.08■■■□□ 2.09
DDX41-202ENST00000503078 ATP8B1O43520 1251 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 FMNL1O95466 1100 aaPredicted RBP28.07■■■□□ 2.08
DDX41-202ENST00000503078 ZNF18P17022 549 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 HSP90AA4PQ58FG1 418 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 SPECC1Q5M775 1068 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 NT5DC1Q5TFE4 455 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 TC2NQ8N9U0 490 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 MLKLQ8NB16 471 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 WASF1Q92558 559 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 DACH1Q9UI36 760 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 SLC12A7Q9Y666 1083 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 ZNF335Q9H4Z2 1342 aaPredicted RBP28.07■■■□□ 2.08
DDX41-202ENST00000503078 KDM4FA0A1W2PPD8 638 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 PDE6AP16499 860 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 GNG11P61952 73 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 MAP3K9P80192 1104 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 KIF6Q6ZMV9 814 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 ENOX1Q8TC92 643 aaKnown RBP28.07■■■□□ 2.08
DDX41-202ENST00000503078 NFE2L3Q9Y4A8 694 aa28.07■■■□□ 2.08
DDX41-202ENST00000503078 CDK11BP21127 795 aaKnown RBP28.06■■■□□ 2.08
DDX41-202ENST00000503078 ITGA6P23229 1130 aa28.06■■■□□ 2.08
DDX41-202ENST00000503078 TBC1D2BQ9UPU7 963 aa28.06■■■□□ 2.08
DDX41-202ENST00000503078 MYO5AQ9Y4I1 1855 aaKnown RBP28.06■■■□□ 2.08
DDX41-202ENST00000503078 FMR1Q06787 632 aaKnown RBP eCLIP28.06■■■□□ 2.08
DDX41-202ENST00000503078 ALX1Q15699 326 aa28.06■■■□□ 2.08
DDX41-202ENST00000503078 WDR24Q96S15 920 aa28.06■■■□□ 2.08
DDX41-202ENST00000503078 STRBPQ96SI9 672 aaKnown RBP28.06■■■□□ 2.08
DDX41-202ENST00000503078 PRDM11Q9NQV5 511 aa28.06■■■□□ 2.08
DDX41-202ENST00000503078 ERICH4A6NGS2 130 aa28.05■■■□□ 2.08
DDX41-202ENST00000503078 BTBD18B2RXH4 712 aa28.05■■■□□ 2.08
DDX41-202ENST00000503078 MMP1P03956 469 aa28.05■■■□□ 2.08
DDX41-202ENST00000503078 PTPREP23469 700 aa28.05■■■□□ 2.08
DDX41-202ENST00000503078 CYP2C19P33261 490 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms