RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 IGF2BP3O00425 579 aaKnown RBP eCLIP30.35■■■□□ 2.45
TRIO-204ENST00000502816 SH3BP5LQ7L8J4 393 aa30.35■■■□□ 2.45
TRIO-204ENST00000502816 AACSQ86V21 672 aa30.35■■■□□ 2.45
TRIO-204ENST00000502816 COL2A1P02458 1487 aaPredicted RBP30.34■■■□□ 2.45
TRIO-204ENST00000502816 PPP4CP60510 307 aa30.34■■■□□ 2.45
TRIO-204ENST00000502816 CNKSR2Q8WXI2 1034 aa30.34■■■□□ 2.45
TRIO-204ENST00000502816 ZKSCAN4Q969J2 545 aaPredicted RBP30.34■■■□□ 2.45
TRIO-204ENST00000502816 PTPN18Q99952 460 aa30.34■■■□□ 2.45
TRIO-204ENST00000502816 CLASRPQ8N2M8 674 aaKnown RBP30.33■■■□□ 2.45
TRIO-204ENST00000502816 IL1RAPL2Q9NP60 686 aa30.33■■■□□ 2.45
TRIO-204ENST00000502816 GTF2A2P52657 109 aa30.32■■■□□ 2.44
TRIO-204ENST00000502816 NOL9Q5SY16 702 aaKnown RBP30.32■■■□□ 2.44
TRIO-204ENST00000502816 NAA16Q6N069 864 aaPredicted RBP30.32■■■□□ 2.44
TRIO-204ENST00000502816 TMED8Q6PL24 325 aaPredicted RBP30.32■■■□□ 2.44
TRIO-204ENST00000502816 ABHD8Q96I13 439 aa30.32■■■□□ 2.44
TRIO-204ENST00000502816 PIH1D3Q9NQM4 214 aaKnown RBP30.32■■■□□ 2.44
TRIO-204ENST00000502816 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.32■■■□□ 2.44
TRIO-204ENST00000502816 DDTLA6NHG4 134 aaPredicted RBP30.31■■■□□ 2.44
TRIO-204ENST00000502816 PHF20L1A8MW92 1017 aa30.31■■■□□ 2.44
TRIO-204ENST00000502816 GPR25O00155 361 aa30.31■■■□□ 2.44
TRIO-204ENST00000502816 INPP5BP32019 993 aa30.31■■■□□ 2.44
TRIO-204ENST00000502816 OTUD7BQ6GQQ9 843 aa30.31■■■□□ 2.44
TRIO-204ENST00000502816 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.31■■■□□ 2.44
TRIO-204ENST00000502816 MCOLN1Q9GZU1 580 aa30.31■■■□□ 2.44
TRIO-204ENST00000502816 PPATQ06203 517 aa30.3■■■□□ 2.44
TRIO-204ENST00000502816 PPIL2Q13356 520 aa30.3■■■□□ 2.44
TRIO-204ENST00000502816 ZNF296Q8WUU4 475 aaPredicted RBP30.3■■■□□ 2.44
TRIO-204ENST00000502816 OTUD5Q96G74 571 aa30.3■■■□□ 2.44
TRIO-204ENST00000502816 R3HDMLQ9H3Y0 253 aa30.3■■■□□ 2.44
TRIO-204ENST00000502816 FOCADQ5VW36 1801 aa30.3■■■□□ 2.44
TRIO-204ENST00000502816 CDK5RAP2Q96SN8 1893 aa30.29■■■□□ 2.44
TRIO-204ENST00000502816 TBC1D12O60347 775 aa30.29■■■□□ 2.44
TRIO-204ENST00000502816 BAG3O95817 575 aa30.28■■■□□ 2.44
TRIO-204ENST00000502816 PLCG2P16885 1265 aa30.28■■■□□ 2.44
TRIO-204ENST00000502816 PICALMQ13492 652 aa30.28■■■□□ 2.44
TRIO-204ENST00000502816 DGKZQ13574 1117 aa30.28■■■□□ 2.44
TRIO-204ENST00000502816 BRI3BPQ8WY22 251 aa30.28■■■□□ 2.44
TRIO-204ENST00000502816 ADGRA1Q86SQ6 560 aa30.27■■■□□ 2.44
TRIO-204ENST00000502816 OSBPL5Q9H0X9 879 aaPredicted RBP30.27■■■□□ 2.44
TRIO-204ENST00000502816 IRF6O14896 467 aa30.26■■■□□ 2.43
TRIO-204ENST00000502816 CTU1Q7Z7A3 348 aaKnown RBP30.26■■■□□ 2.43
TRIO-204ENST00000502816 ZSCAN29Q8IWY8 852 aaPredicted RBP30.26■■■□□ 2.43
TRIO-204ENST00000502816 CCL15-CCL14A0A0B4J2E2 113 aa30.25■■■□□ 2.43
TRIO-204ENST00000502816 CCL15Q16663 113 aa30.25■■■□□ 2.43
TRIO-204ENST00000502816 TEX11Q8IYF3 940 aa30.25■■■□□ 2.43
TRIO-204ENST00000502816 SH3RF3Q8TEJ3 882 aaPredicted RBP30.25■■■□□ 2.43
TRIO-204ENST00000502816 NOL10Q9BSC4 688 aaKnown RBP30.25■■■□□ 2.43
TRIO-204ENST00000502816 ANTXR1Q9H6X2 564 aa30.25■■■□□ 2.43
TRIO-204ENST00000502816 ZCCHC17Q9NP64 241 aaKnown RBP30.25■■■□□ 2.43
TRIO-204ENST00000502816 AATFQ9NY61 560 aaKnown RBP eCLIP30.25■■■□□ 2.43
TRIO-204ENST00000502816 KCNH4Q9UQ05 1017 aa30.25■■■□□ 2.43
TRIO-204ENST00000502816 FKTNO75072 461 aa30.24■■■□□ 2.43
TRIO-204ENST00000502816 IFIT2P09913 472 aaKnown RBP30.24■■■□□ 2.43
TRIO-204ENST00000502816 CETPP11597 493 aa30.24■■■□□ 2.43
TRIO-204ENST00000502816 SNAPC2Q13487 334 aa30.24■■■□□ 2.43
TRIO-204ENST00000502816 APBB1O00213 710 aa30.23■■■□□ 2.43
TRIO-204ENST00000502816 CAPN15O75808 1086 aa30.23■■■□□ 2.43
TRIO-204ENST00000502816 RRP1P56182 461 aaKnown RBP30.23■■■□□ 2.43
TRIO-204ENST00000502816 CERS3Q8IU89 383 aa30.23■■■□□ 2.43
TRIO-204ENST00000502816 DCTPP1Q9H773 170 aa30.23■■■□□ 2.43
TRIO-204ENST00000502816 NDUFB9Q9Y6M9 179 aa30.23■■■□□ 2.43
TRIO-204ENST00000502816 CTNND1O60716 968 aaKnown RBP30.22■■■□□ 2.43
TRIO-204ENST00000502816 CRHR2Q13324 411 aa30.22■■■□□ 2.43
TRIO-204ENST00000502816 TTF1Q15361 905 aaPredicted RBP30.22■■■□□ 2.43
TRIO-204ENST00000502816 DOCK1Q14185 1865 aa30.21■■■□□ 2.43
TRIO-204ENST00000502816 IDH1O75874 414 aaKnown RBP30.21■■■□□ 2.43
TRIO-204ENST00000502816 MAP3K12Q12852 859 aa30.21■■■□□ 2.43
TRIO-204ENST00000502816 PKN2Q16513 984 aaKnown RBP30.21■■■□□ 2.43
TRIO-204ENST00000502816 SCYL3Q8IZE3 742 aa30.21■■■□□ 2.43
TRIO-204ENST00000502816 LRRCC1Q9C099 1032 aa30.21■■■□□ 2.43
TRIO-204ENST00000502816 DHX36Q9H2U1 1008 aaKnown RBP30.21■■■□□ 2.43
TRIO-204ENST00000502816 SIPA1L1O43166 1804 aa30.2■■■□□ 2.43
TRIO-204ENST00000502816 PHIPQ8WWQ0 1821 aa30.2■■■□□ 2.43
TRIO-204ENST00000502816 CYP7A1P22680 504 aa30.2■■■□□ 2.43
TRIO-204ENST00000502816 FAM43AQ8N2R8 423 aa30.2■■■□□ 2.43
TRIO-204ENST00000502816 CXCL11O14625 94 aa30.19■■■□□ 2.42
TRIO-204ENST00000502816 ATP5JP18859 108 aa30.19■■■□□ 2.42
TRIO-204ENST00000502816 METTL16Q86W50 562 aaKnown RBP30.19■■■□□ 2.42
TRIO-204ENST00000502816 SLURP2P0DP57 97 aa30.18■■■□□ 2.42
TRIO-204ENST00000502816 PTPRAP18433 802 aa30.18■■■□□ 2.42
TRIO-204ENST00000502816 MAGEB6Q8N7X4 407 aa30.18■■■□□ 2.42
TRIO-204ENST00000502816 PI4KBQ9UBF8 816 aa30.18■■■□□ 2.42
TRIO-204ENST00000502816 HERC5Q9UII4 1024 aaKnown RBP30.18■■■□□ 2.42
TRIO-204ENST00000502816 FLT1P17948 1338 aa30.18■■■□□ 2.42
TRIO-204ENST00000502816 BTBD19C9JJ37 291 aa30.17■■■□□ 2.42
TRIO-204ENST00000502816 MOGSQ13724 837 aa30.17■■■□□ 2.42
TRIO-204ENST00000502816 TGFBRAP1Q8WUH2 860 aa30.17■■■□□ 2.42
TRIO-204ENST00000502816 DYNLL1P63167 89 aaKnown RBP30.16■■■□□ 2.42
TRIO-204ENST00000502816 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.16■■■□□ 2.422e-6■■■■□ 22.6
TRIO-204ENST00000502816 ZFYVE28Q9HCC9 887 aa30.16■■■□□ 2.42
TRIO-204ENST00000502816 AFG3L2Q9Y4W6 797 aa30.16■■■□□ 2.42
TRIO-204ENST00000502816 TAF1CQ15572 869 aaPredicted RBP30.15■■■□□ 2.42
TRIO-204ENST00000502816 ANKRD23Q86SG2 305 aa30.15■■■□□ 2.42
TRIO-204ENST00000502816 YTHDC1Q96MU7 727 aaKnown RBP30.15■■■□□ 2.42
TRIO-204ENST00000502816 PICK1Q9NRD5 415 aa30.15■■■□□ 2.42
TRIO-204ENST00000502816 PCDHB15Q9Y5E8 787 aa30.15■■■□□ 2.42
TRIO-204ENST00000502816 PTPRFP10586 1907 aa30.15■■■□□ 2.42
TRIO-204ENST00000502816 ATAD5Q96QE3 1844 aa30.14■■■□□ 2.42
TRIO-204ENST00000502816 FOXP4Q8IVH2 680 aaPredicted RBP30.13■■■□□ 2.41
TRIO-204ENST00000502816 MAPKAPK5Q8IW41 473 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms