RNA–Protein interactions for RNA: ENST00000502664.5

GYPB-202, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-202ENST00000502664 DUSP27Q5VZP5 1158 aa6.6□□□□□ -1.35
GYPB-202ENST00000502664 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.6□□□□□ -1.35
GYPB-202ENST00000502664 TTLL11Q8NHH1 800 aa6.6□□□□□ -1.35
GYPB-202ENST00000502664 CCER1Q8TC90 406 aaPredicted RBP6.6□□□□□ -1.35
GYPB-202ENST00000502664 DPF3Q92784 378 aa6.6□□□□□ -1.35
GYPB-202ENST00000502664 SLC6A16Q9GZN6 736 aa6.6□□□□□ -1.35
GYPB-202ENST00000502664 COA1Q9GZY4 146 aa6.6□□□□□ -1.35
GYPB-202ENST00000502664 BABAM1Q9NWV8 329 aa6.6□□□□□ -1.35
GYPB-202ENST00000502664 DBF4Q9UBU7 674 aaPredicted RBP6.6□□□□□ -1.35
GYPB-202ENST00000502664 ARIH1Q9Y4X5 557 aaPredicted RBP6.6□□□□□ -1.35
GYPB-202ENST00000502664 LAMA3Q16787 3333 aa6.6□□□□□ -1.35
GYPB-202ENST00000502664 MYO3BQ8WXR4 1341 aa6.59□□□□□ -1.35
GYPB-202ENST00000502664 ELL2O00472 640 aaPredicted RBP6.59□□□□□ -1.35
GYPB-202ENST00000502664 SMCPP49901 116 aaPredicted RBP6.59□□□□□ -1.35
GYPB-202ENST00000502664 CTSWP56202 376 aa6.59□□□□□ -1.35
GYPB-202ENST00000502664 RASA3Q14644 834 aa6.59□□□□□ -1.35
GYPB-202ENST00000502664 DLGAP5Q15398 846 aa6.59□□□□□ -1.35
GYPB-202ENST00000502664 TAF1CQ15572 869 aaPredicted RBP6.59□□□□□ -1.35
GYPB-202ENST00000502664 CTC1Q2NKJ3 1217 aa6.59□□□□□ -1.35
GYPB-202ENST00000502664 CFAP100Q494V2 611 aa6.59□□□□□ -1.35
GYPB-202ENST00000502664 UBE2Q1Q7Z7E8 422 aa6.59□□□□□ -1.35
GYPB-202ENST00000502664 VEZTQ9HBM0 779 aa6.59□□□□□ -1.35
GYPB-202ENST00000502664 CD209Q9NNX6 404 aa6.59□□□□□ -1.35
GYPB-202ENST00000502664 BSDC1Q9NW68 430 aaPredicted RBP6.59□□□□□ -1.35
GYPB-202ENST00000502664 ZNF804BA4D1E1 1349 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 TRIOBPQ9H2D6 2365 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 CCL15-CCL14A0A0B4J2E2 113 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 PPP1R12BO60237 982 aaPredicted RBP6.58□□□□□ -1.36
GYPB-202ENST00000502664 TAF5LO75529 589 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 IGKV5-2P06315 115 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 VGLL4Q14135 290 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 CCL15Q16663 113 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 CWF19L2Q2TBE0 894 aaKnown RBP6.58□□□□□ -1.36
GYPB-202ENST00000502664 KMT5BQ4FZB7 885 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 Q7L0L9 218 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 NBPF11Q86T75 865 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 ANKRD13AQ8IZ07 590 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 CCDC191Q8NCU4 936 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 HELBQ8NG08 1087 aaPredicted RBP6.58□□□□□ -1.36
GYPB-202ENST00000502664 TEPSINQ96N21 525 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 MBIPQ9NS73 344 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 HYPKQ9NX55 129 aa6.58□□□□□ -1.36
GYPB-202ENST00000502664 CWC25Q9NXE8 425 aaPredicted RBP6.58□□□□□ -1.36
GYPB-202ENST00000502664 COL1A1P02452 1464 aaPredicted RBP6.58□□□□□ -1.36
GYPB-202ENST00000502664 ECM29Q5VYK3 1845 aa6.57□□□□□ -1.36
GYPB-202ENST00000502664 ZBTB7BO15156 539 aaPredicted RBP6.57□□□□□ -1.36
GYPB-202ENST00000502664 NR1I2O75469 434 aa6.57□□□□□ -1.36
GYPB-202ENST00000502664 IREB2P48200 963 aaKnown RBP6.57□□□□□ -1.36
GYPB-202ENST00000502664 LACTBP83111 547 aaPredicted RBP6.57□□□□□ -1.36
GYPB-202ENST00000502664 E2F4Q16254 413 aa6.57□□□□□ -1.36
GYPB-202ENST00000502664 GRIK5Q16478 980 aa6.57□□□□□ -1.36
GYPB-202ENST00000502664 OTUD7BQ6GQQ9 843 aa6.57□□□□□ -1.36
GYPB-202ENST00000502664 MTMR14Q8NCE2 650 aa6.57□□□□□ -1.36
GYPB-202ENST00000502664 CDC5LQ99459 802 aaKnown RBP6.57□□□□□ -1.36
GYPB-202ENST00000502664 METTL22Q9BUU2 404 aaPredicted RBP6.57□□□□□ -1.36
GYPB-202ENST00000502664 TDRD3Q9H7E2 651 aaKnown RBP6.57□□□□□ -1.36
GYPB-202ENST00000502664 ZFYVE28Q9HCC9 887 aa6.57□□□□□ -1.36
GYPB-202ENST00000502664 STAP2Q9UGK3 403 aa6.57□□□□□ -1.36
GYPB-202ENST00000502664 MAP3K2Q9Y2U5 619 aa6.57□□□□□ -1.36
GYPB-202ENST00000502664 LEMD3Q9Y2U8 911 aa6.57□□□□□ -1.36
GYPB-202ENST00000502664 A0A0C4DFX4 3053 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 TCP10L2B9ZVM9 353 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 BTBD19C9JJ37 291 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 TERTO14746 1132 aaKnown RBP6.56□□□□□ -1.36
GYPB-202ENST00000502664 TLR2O60603 784 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 CFHP08603 1231 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 HOXB7P09629 217 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 DNAJB2P25686 324 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 GJA8P48165 433 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 CHRNDQ07001 517 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 SUPT20HL1Q3ZLR7 823 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 CYP4X1Q8N118 509 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 C8orf58Q8NAV2 365 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.56□□□□□ -1.365e-10■□□□□ 9.2
GYPB-202ENST00000502664 TRIM47Q96LD4 638 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 COL25A1Q9BXS0 654 aaPredicted RBP6.56□□□□□ -1.36
GYPB-202ENST00000502664 TMEM39BQ9GZU3 492 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 TMEM134Q9H6X4 195 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 ZNF70Q9UC06 446 aaPredicted RBP6.56□□□□□ -1.36
GYPB-202ENST00000502664 CPA4Q9UI42 421 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 PPP2R3BQ9Y5P8 575 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 SNCAIPQ9Y6H5 919 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 UNC80Q8N2C7 3258 aa6.56□□□□□ -1.36
GYPB-202ENST00000502664 A0A1B0GUL6 1792 aa6.55□□□□□ -1.36
GYPB-202ENST00000502664 CCL5P13501 91 aa6.55□□□□□ -1.36
GYPB-202ENST00000502664 SNRPBP14678 240 aaKnown RBP6.55□□□□□ -1.36
GYPB-202ENST00000502664 ITGA6P23229 1130 aa6.55□□□□□ -1.36
GYPB-202ENST00000502664 RPIAP49247 311 aa6.55□□□□□ -1.36
GYPB-202ENST00000502664 GTF2A2P52657 109 aa6.55□□□□□ -1.36
GYPB-202ENST00000502664 RBM5P52756 815 aaKnown RBP eCLIP6.55□□□□□ -1.36
GYPB-202ENST00000502664 CACNB3P54284 484 aa6.55□□□□□ -1.36
GYPB-202ENST00000502664 CASP7P55210 303 aa6.55□□□□□ -1.36
GYPB-202ENST00000502664 C17orf99Q6UX52 265 aa6.55□□□□□ -1.36
GYPB-202ENST00000502664 G2E3Q7L622 706 aa6.55□□□□□ -1.36
GYPB-202ENST00000502664 UBE3BQ7Z3V4 1068 aa6.55□□□□□ -1.36
GYPB-202ENST00000502664 TSPYL6Q8N831 410 aa6.55□□□□□ -1.36
GYPB-202ENST00000502664 ZKSCAN4Q969J2 545 aaPredicted RBP6.55□□□□□ -1.36
GYPB-202ENST00000502664 UNC93B1Q9H1C4 597 aa6.55□□□□□ -1.36
GYPB-202ENST00000502664 PNNQ9H307 717 aaKnown RBP6.55□□□□□ -1.36
GYPB-202ENST00000502664 GABRQQ9UN88 632 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms