RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 POTEB2H3BUK9 544 aa13.14□□□□□ -0.31
PBX1-211ENST00000498497 DNM1LO00429 736 aa13.14□□□□□ -0.31
PBX1-211ENST00000498497 ATP6V1G1O75348 118 aa13.14□□□□□ -0.31
PBX1-211ENST00000498497 PAX3P23760 479 aa13.14□□□□□ -0.31
PBX1-211ENST00000498497 STX17P56962 302 aa13.14□□□□□ -0.31
PBX1-211ENST00000498497 RRP12Q5JTH9 1297 aaKnown RBP13.14□□□□□ -0.31
PBX1-211ENST00000498497 TBC1D1Q86TI0 1168 aaPredicted RBP13.14□□□□□ -0.31
PBX1-211ENST00000498497 MRPS27Q92552 414 aaKnown RBP13.14□□□□□ -0.31
PBX1-211ENST00000498497 RNPC3Q96LT9 517 aaKnown RBP13.14□□□□□ -0.31
PBX1-211ENST00000498497 NUP58Q9BVL2 599 aa13.14□□□□□ -0.31
PBX1-211ENST00000498497 PAPOLBQ9NRJ5 636 aaKnown RBP13.14□□□□□ -0.31
PBX1-211ENST00000498497 ADGRL2O95490 1459 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 RESTQ13127 1097 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 TMEM139Q8IV31 216 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 MSANTD4Q8NCY6 345 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 ZNF473Q8WTR7 871 aaKnown RBP13.13□□□□□ -0.31
PBX1-211ENST00000498497 TBC1D5Q92609 795 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 JPH4Q96JJ6 628 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 C8orf76Q96K31 380 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.13□□□□□ -0.31
PBX1-211ENST00000498497 LNPEPQ9UIQ6 1025 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 ARHGEF40Q8TER5 1519 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
PBX1-211ENST00000498497 ANP32DO95626 131 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 VSTM4Q8IW00 320 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 HDAC7Q8WUI4 952 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 ARHGAP45Q92619 1136 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
PBX1-211ENST00000498497 RASSF9O75901 435 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 TC2NQ8N9U0 490 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 NAPGQ99747 312 aaPredicted RBP13.13□□□□□ -0.31
PBX1-211ENST00000498497 KCND1Q9NSA2 647 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 INTS13Q9NVM9 706 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 RHBDL2Q9NX52 303 aa13.13□□□□□ -0.31
PBX1-211ENST00000498497 MED14O60244 1454 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 EIF4G3O43432 1585 aaKnown RBP13.12□□□□□ -0.31
PBX1-211ENST00000498497 TUBB4AP04350 444 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 GNAI2P04899 355 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 CDC25AP30304 524 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 CTCFP49711 727 aaPredicted RBP13.12□□□□□ -0.31
PBX1-211ENST00000498497 ENOX2Q16206 610 aaKnown RBP13.12□□□□□ -0.31
PBX1-211ENST00000498497 SPATA21Q7Z572 469 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 AIDAQ96BJ3 306 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
PBX1-211ENST00000498497 NOD2Q9HC29 1040 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 SPDYE3A6NKU9 549 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 EPB41L2O43491 1005 aaKnown RBP13.12□□□□□ -0.31
PBX1-211ENST00000498497 NEFHP12036 1026 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 LSP1P33241 339 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 PAPOLAP51003 745 aaKnown RBP13.12□□□□□ -0.31
PBX1-211ENST00000498497 CREB3L3Q68CJ9 461 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 MICALCLQ6ZW33 695 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 CNTROBQ8N137 903 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 PRCCQ92733 491 aaPredicted RBP13.12□□□□□ -0.31
PBX1-211ENST00000498497 CCT8L2Q96SF2 557 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 STK38LQ9Y2H1 464 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 NDUFB9Q9Y6M9 179 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 ADGRF5Q8IZF2 1346 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 PLA2R1Q13018 1463 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 CEP170Q5SW79 1584 aa13.12□□□□□ -0.31
PBX1-211ENST00000498497 CA8P35219 290 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 PDCD2Q16342 344 aaPredicted RBP13.11□□□□□ -0.31
PBX1-211ENST00000498497 CDCA2Q69YH5 1023 aaPredicted RBP13.11□□□□□ -0.31
PBX1-211ENST00000498497 DRAXINQ8NBI3 349 aaPredicted RBP13.11□□□□□ -0.31
PBX1-211ENST00000498497 ATP6V0A4Q9HBG4 840 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 ZNF518AQ6AHZ1 1483 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 ESYT3A0FGR9 886 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 GUCY2FP51841 1108 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 NNTQ13423 1086 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 TTMPQ5BVD1 217 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 CLIC4Q9Y696 253 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 TEX33O43247 280 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 CHGBP05060 677 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 IGBP1P78318 339 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 MXRA7P84157 204 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 ZBED6P86452 979 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 MIS18BP1Q6P0N0 1132 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 TLDC1Q6P9B6 456 aa13.11□□□□□ -0.31
PBX1-211ENST00000498497 AATFQ9NY61 560 aaKnown RBP eCLIP13.11□□□□□ -0.31
PBX1-211ENST00000498497 THRAP3Q9Y2W1 955 aaKnown RBP13.11□□□□□ -0.31
PBX1-211ENST00000498497 FOXN1O15353 648 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 COQ9O75208 318 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 PPFIA2O75334 1257 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
PBX1-211ENST00000498497 MYL5Q02045 173 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 DBN1Q16643 649 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 LRRC23Q53EV4 343 aaPredicted RBP13.1□□□□□ -0.31
PBX1-211ENST00000498497 FAM133BQ5BKY9 247 aaKnown RBP13.1□□□□□ -0.31
PBX1-211ENST00000498497 FAM47EQ6ZV65 393 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 CCDC170Q8IYT3 715 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 DYDC1Q8WWB3 177 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 JADE2Q9NQC1 790 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 CBFA2T2O43439 604 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 FMNL1O95466 1100 aaPredicted RBP13.1□□□□□ -0.31
PBX1-211ENST00000498497 FUT4P22083 530 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 MAP3K12Q12852 859 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 OR8K1Q8NGG5 319 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 IFT81Q8WYA0 676 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
PBX1-211ENST00000498497 RTN3O95197 1032 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms