RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 PHF20L1A8MW92 1017 aa17.41■□□□□ 0.38
CCDC58-207ENST00000498466 TNPO2O14787 897 aaKnown RBP17.41■□□□□ 0.38
CCDC58-207ENST00000498466 PTPRAP18433 802 aa17.41■□□□□ 0.38
CCDC58-207ENST00000498466 ZSCAN29Q8IWY8 852 aaPredicted RBP17.41■□□□□ 0.38
CCDC58-207ENST00000498466 MRPL50Q8N5N7 158 aaKnown RBP17.41■□□□□ 0.38
CCDC58-207ENST00000498466 SMCR8Q8TEV9 937 aaPredicted RBP17.41■□□□□ 0.38
CCDC58-207ENST00000498466 DEFB118Q96PH6 123 aa17.41■□□□□ 0.38
CCDC58-207ENST00000498466 USP44Q9H0E7 712 aa17.41■□□□□ 0.38
CCDC58-207ENST00000498466 GNL3LQ9NVN8 582 aaKnown RBP17.41■□□□□ 0.38
CCDC58-207ENST00000498466 TAOK2Q9UL54 1235 aa17.41■□□□□ 0.38
CCDC58-207ENST00000498466 A0A1W2PPC1 479 aa17.4■□□□□ 0.38
CCDC58-207ENST00000498466 DLL1O00548 723 aa17.4■□□□□ 0.38
CCDC58-207ENST00000498466 RGS3P49796 1198 aa17.4■□□□□ 0.38
CCDC58-207ENST00000498466 PXYLP1Q8TE99 480 aa17.4■□□□□ 0.38
CCDC58-207ENST00000498466 AFG3L2Q9Y4W6 797 aa17.4■□□□□ 0.38
CCDC58-207ENST00000498466 LRRFIP2Q9Y608 721 aaKnown RBP17.4■□□□□ 0.38
CCDC58-207ENST00000498466 PTPRCP08575 1304 aa17.4■□□□□ 0.38
CCDC58-207ENST00000498466 AK9Q5TCS8 1911 aa17.39■□□□□ 0.37
CCDC58-207ENST00000498466 RFX5P48382 616 aaPredicted RBP17.39■□□□□ 0.37
CCDC58-207ENST00000498466 ATP2B3Q16720 1220 aa17.39■□□□□ 0.37
CCDC58-207ENST00000498466 SLC45A1Q9Y2W3 748 aa17.39■□□□□ 0.37
CCDC58-207ENST00000498466 ATRNL1Q5VV63 1379 aa17.39■□□□□ 0.37
CCDC58-207ENST00000498466 A0A0C4DFX4 3053 aa17.39■□□□□ 0.37
CCDC58-207ENST00000498466 ENTPD3O75355 529 aa17.38■□□□□ 0.37
CCDC58-207ENST00000498466 CAPN2P17655 700 aa17.38■□□□□ 0.37
CCDC58-207ENST00000498466 IRF5Q13568 498 aa17.38■□□□□ 0.37
CCDC58-207ENST00000498466 ATG9AQ7Z3C6 839 aa17.38■□□□□ 0.37
CCDC58-207ENST00000498466 IDI2Q9BXS1 227 aa17.38■□□□□ 0.37
CCDC58-207ENST00000498466 SIL1Q9H173 461 aa17.38■□□□□ 0.37
CCDC58-207ENST00000498466 STAP2Q9UGK3 403 aa17.38■□□□□ 0.37
CCDC58-207ENST00000498466 DENND2AQ9ULE3 1009 aa17.38■□□□□ 0.37
CCDC58-207ENST00000498466 SALL1Q9NSC2 1324 aa17.38■□□□□ 0.37
CCDC58-207ENST00000498466 TRIM75PA6NK02 468 aa17.37■□□□□ 0.37
CCDC58-207ENST00000498466 SOX1O00570 391 aaPredicted RBP17.37■□□□□ 0.37
CCDC58-207ENST00000498466 ANKRD13CQ8N6S4 541 aa17.37■□□□□ 0.37
CCDC58-207ENST00000498466 COA7Q96BR5 231 aa17.37■□□□□ 0.37
CCDC58-207ENST00000498466 LRCH3Q96II8 777 aa17.37■□□□□ 0.37
CCDC58-207ENST00000498466 PAK6Q9NQU5 681 aaPredicted RBP17.37■□□□□ 0.37
CCDC58-207ENST00000498466 CEP126Q9P2H0 1117 aa17.37■□□□□ 0.37
CCDC58-207ENST00000498466 MYH13Q9UKX3 1938 aa17.37■□□□□ 0.37
CCDC58-207ENST00000498466 MGAMO43451 1857 aa17.36■□□□□ 0.37
CCDC58-207ENST00000498466 SEMA3EO15041 775 aa17.36■□□□□ 0.37
CCDC58-207ENST00000498466 ANP32CO43423 234 aa17.36■□□□□ 0.37
CCDC58-207ENST00000498466 CTNND1O60716 968 aaKnown RBP17.36■□□□□ 0.37
CCDC58-207ENST00000498466 SLURP2P0DP57 97 aa17.36■□□□□ 0.37
CCDC58-207ENST00000498466 PHKA1P46020 1223 aa17.36■□□□□ 0.37
CCDC58-207ENST00000498466 SH3BP5LQ7L8J4 393 aa17.36■□□□□ 0.37
CCDC58-207ENST00000498466 DZIP1Q86YF9 867 aaKnown RBP17.36■□□□□ 0.37
CCDC58-207ENST00000498466 FAM9BQ8IZU0 186 aa17.36■□□□□ 0.37
CCDC58-207ENST00000498466 ZGPATQ8N5A5 531 aaKnown RBP17.36■□□□□ 0.37
CCDC58-207ENST00000498466 PAWRQ96IZ0 340 aaKnown RBP17.36■□□□□ 0.37
CCDC58-207ENST00000498466 AGTPBP1Q9UPW5 1226 aa17.36■□□□□ 0.37
CCDC58-207ENST00000498466 DDTLA6NHG4 134 aaPredicted RBP17.35■□□□□ 0.37
CCDC58-207ENST00000498466 PICALMQ13492 652 aa17.35■□□□□ 0.37
CCDC58-207ENST00000498466 NECAB2Q7Z6G3 386 aa17.35■□□□□ 0.37
CCDC58-207ENST00000498466 CRISPLD2Q9H0B8 497 aa17.35■□□□□ 0.37
CCDC58-207ENST00000498466 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.35■□□□□ 0.37
CCDC58-207ENST00000498466 GAKO14976 1311 aa17.34■□□□□ 0.37
CCDC58-207ENST00000498466 CIAO1O76071 339 aa17.34■□□□□ 0.37
CCDC58-207ENST00000498466 MAP3K10Q02779 954 aa17.34■□□□□ 0.37
CCDC58-207ENST00000498466 CCDC84Q86UT8 332 aaPredicted RBP17.34■□□□□ 0.37
CCDC58-207ENST00000498466 SLF2Q8IX21 1173 aa17.34■□□□□ 0.37
CCDC58-207ENST00000498466 DOCK2Q92608 1830 aa17.34■□□□□ 0.37
CCDC58-207ENST00000498466 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCDC58-207ENST00000498466 ABCF2Q9UG63 623 aa17.34■□□□□ 0.37
CCDC58-207ENST00000498466 FBXO3Q9UK99 471 aa17.34■□□□□ 0.37
CCDC58-207ENST00000498466 PNMA3Q9UL41 463 aa17.34■□□□□ 0.37
CCDC58-207ENST00000498466 RFX7Q2KHR2 1363 aa17.33■□□□□ 0.36
CCDC58-207ENST00000498466 FAM110CQ1W6H9 321 aa17.33■□□□□ 0.36
CCDC58-207ENST00000498466 TREML2Q5T2D2 321 aa17.33■□□□□ 0.36
CCDC58-207ENST00000498466 DIS3LQ8TF46 1054 aaKnown RBP17.33■□□□□ 0.36
CCDC58-207ENST00000498466 SSH1Q8WYL5 1049 aa17.33■□□□□ 0.36
CCDC58-207ENST00000498466 DDX4Q9NQI0 724 aaKnown RBP17.33■□□□□ 0.36
CCDC58-207ENST00000498466 BTDP43251 543 aa17.32■□□□□ 0.36
CCDC58-207ENST00000498466 CCDC102BQ68D86 513 aa17.32■□□□□ 0.36
CCDC58-207ENST00000498466 C7orf61Q8IZ16 206 aa17.32■□□□□ 0.36
CCDC58-207ENST00000498466 UBTFL1P0CB47 393 aaPredicted RBP17.31■□□□□ 0.36
CCDC58-207ENST00000498466 ADORA1P30542 326 aa17.31■□□□□ 0.36
CCDC58-207ENST00000498466 IL15P40933 162 aaPredicted RBP17.31■□□□□ 0.36
CCDC58-207ENST00000498466 ANKLE1Q8NAG6 615 aa17.31■□□□□ 0.36
CCDC58-207ENST00000498466 RNF39Q9H2S5 420 aa17.31■□□□□ 0.36
CCDC58-207ENST00000498466 ZMYND8Q9ULU4 1186 aaPredicted RBP17.31■□□□□ 0.36
CCDC58-207ENST00000498466 MROH7-TTC4A0A0A0MT08 1334 aa17.3■□□□□ 0.36
CCDC58-207ENST00000498466 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
CCDC58-207ENST00000498466 HMGCRP04035 888 aa17.3■□□□□ 0.36
CCDC58-207ENST00000498466 RASGRF1Q13972 1273 aa17.3■□□□□ 0.36
CCDC58-207ENST00000498466 SPTY2D1Q68D10 685 aaPredicted RBP17.3■□□□□ 0.36
CCDC58-207ENST00000498466 PROCA1Q8NCQ7 364 aaPredicted RBP17.3■□□□□ 0.36
CCDC58-207ENST00000498466 FAM163AQ96GL9 167 aaPredicted RBP17.3■□□□□ 0.36
CCDC58-207ENST00000498466 GDF15Q99988 308 aa17.3■□□□□ 0.36
CCDC58-207ENST00000498466 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCDC58-207ENST00000498466 PA2G4Q9UQ80 394 aaKnown RBP17.3■□□□□ 0.36
CCDC58-207ENST00000498466 DOCK1Q14185 1865 aa17.3■□□□□ 0.36
CCDC58-207ENST00000498466 FAM196BA6NMK8 535 aa17.29■□□□□ 0.36
CCDC58-207ENST00000498466 TBC1D12O60347 775 aa17.29■□□□□ 0.36
CCDC58-207ENST00000498466 BMP8BP34820 402 aa17.29■□□□□ 0.36
CCDC58-207ENST00000498466 GCLCP48506 637 aaPredicted RBP17.29■□□□□ 0.36
CCDC58-207ENST00000498466 SPP2Q13103 211 aa17.29■□□□□ 0.36
CCDC58-207ENST00000498466 PABPC4Q13310 644 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCDC58-207ENST00000498466 NBPF3Q9H094 633 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms