RNA–Protein interactions for RNA: ENST00000498449.5

SYNPR-215, Transcript of synaptoporin, humanhuman

TSL 2

Gene SYNPR, Length 1,296 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPR-215ENST00000498449 CTR9Q6PD62 1173 aa16.36■□□□□ 0.21
SYNPR-215ENST00000498449 NBPF3Q9H094 633 aa16.36■□□□□ 0.21
SYNPR-215ENST00000498449 DDX4Q9NQI0 724 aaKnown RBP16.36■□□□□ 0.21
SYNPR-215ENST00000498449 ARPP21Q9UBL0 812 aaPredicted RBP16.36■□□□□ 0.21
SYNPR-215ENST00000498449 SCN4AP35499 1836 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 CYP2D7A0A087X1C5 515 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 USP17L12C9JPN9 530 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 USP17L21D6R901 530 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 H7C1D1 291 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 EGFRP00533 1210 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 CACNB3P54284 484 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 PPARAQ07869 468 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 NFIAQ12857 509 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 PICALMQ13492 652 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 KRT32Q14532 448 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 RABEP1Q15276 862 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 ADCK5Q3MIX3 580 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 STOX1Q6ZVD7 989 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 TBC1D10CQ8IV04 446 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 IDI2Q9BXS1 227 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 MCM9Q9NXL9 1143 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 ANAPC4Q9UJX5 808 aa16.35■□□□□ 0.21
SYNPR-215ENST00000498449 MINDY4BA8MYZ0 360 aa16.34■□□□□ 0.21
SYNPR-215ENST00000498449 E7EWF7 191 aa16.34■□□□□ 0.21
SYNPR-215ENST00000498449 WNT10BO00744 389 aa16.34■□□□□ 0.21
SYNPR-215ENST00000498449 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
SYNPR-215ENST00000498449 CYP2D6P10635 497 aa16.34■□□□□ 0.21
SYNPR-215ENST00000498449 KIF4BQ2VIQ3 1234 aa16.34■□□□□ 0.21
SYNPR-215ENST00000498449 NBPF9Q3BBW0 867 aa16.34■□□□□ 0.21
SYNPR-215ENST00000498449 TBC1D10BQ4KMP7 808 aaPredicted RBP16.34■□□□□ 0.21
SYNPR-215ENST00000498449 SAMD7Q7Z3H4 446 aa16.34■□□□□ 0.21
SYNPR-215ENST00000498449 JAKMIP1Q96N16 626 aaKnown RBP16.34■□□□□ 0.21
SYNPR-215ENST00000498449 TM6SF1Q9BZW5 370 aa16.34■□□□□ 0.21
SYNPR-215ENST00000498449 OSBPL5Q9H0X9 879 aaPredicted RBP16.34■□□□□ 0.21
SYNPR-215ENST00000498449 TMOD2Q9NZR1 351 aa16.34■□□□□ 0.21
SYNPR-215ENST00000498449 ZNF70Q9UC06 446 aaPredicted RBP16.34■□□□□ 0.21
SYNPR-215ENST00000498449 FAM198AQ9UFP1 575 aa16.34■□□□□ 0.21
SYNPR-215ENST00000498449 SAP30BPQ9UHR5 308 aaKnown RBP16.34■□□□□ 0.21
SYNPR-215ENST00000498449 POLR2AP24928 1970 aaKnown RBP16.34■□□□□ 0.21
SYNPR-215ENST00000498449 WDR90Q96KV7 1748 aa16.33■□□□□ 0.21
SYNPR-215ENST00000498449 CLRN2A0PK11 232 aa16.33■□□□□ 0.2
SYNPR-215ENST00000498449 CTDSPL2Q05D32 466 aa16.33■□□□□ 0.2
SYNPR-215ENST00000498449 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.2
SYNPR-215ENST00000498449 C12orf60Q5U649 245 aa16.33■□□□□ 0.2
SYNPR-215ENST00000498449 DPY19L2Q6NUT2 758 aa16.33■□□□□ 0.2
SYNPR-215ENST00000498449 L3MBTL3Q96JM7 780 aaPredicted RBP16.33■□□□□ 0.2
SYNPR-215ENST00000498449 COL2A1P02458 1487 aaPredicted RBP16.33■□□□□ 0.2
SYNPR-215ENST00000498449 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
SYNPR-215ENST00000498449 GLTPD2A6NH11 291 aa16.32■□□□□ 0.2
SYNPR-215ENST00000498449 SMIM22K7EJ46 135 aa16.32■□□□□ 0.2
SYNPR-215ENST00000498449 MYO1BO43795 1136 aa16.32■□□□□ 0.2
SYNPR-215ENST00000498449 ENTPD3O75355 529 aa16.32■□□□□ 0.2
SYNPR-215ENST00000498449 POLR3DP05423 398 aaPredicted RBP16.32■□□□□ 0.2
SYNPR-215ENST00000498449 LMOD1P29536 600 aaPredicted RBP16.32■□□□□ 0.2
SYNPR-215ENST00000498449 EPS15P42566 896 aa16.32■□□□□ 0.2
SYNPR-215ENST00000498449 EVX2Q03828 476 aa16.32■□□□□ 0.2
SYNPR-215ENST00000498449 FKBP1CQ5VVH2 108 aa16.32■□□□□ 0.2
SYNPR-215ENST00000498449 AMOTL1Q8IY63 956 aa16.32■□□□□ 0.2
SYNPR-215ENST00000498449 TRPM4Q8TD43 1214 aa16.32■□□□□ 0.2
SYNPR-215ENST00000498449 ROBO3Q96MS0 1386 aa16.32■□□□□ 0.2
SYNPR-215ENST00000498449 UPF3BQ9BZI7 483 aaKnown RBP16.32■□□□□ 0.2
SYNPR-215ENST00000498449 NEDD4P46934 1319 aa16.31■□□□□ 0.2
SYNPR-215ENST00000498449 CASTP20810 708 aaKnown RBP16.31■□□□□ 0.2
SYNPR-215ENST00000498449 PSMA5P28066 241 aa16.31■□□□□ 0.2
SYNPR-215ENST00000498449 SLC4A8Q2Y0W8 1093 aa16.31■□□□□ 0.2
SYNPR-215ENST00000498449 AKNAD1Q5T1N1 836 aa16.31■□□□□ 0.2
SYNPR-215ENST00000498449 ZFPM1Q8IX07 1006 aa16.31■□□□□ 0.2
SYNPR-215ENST00000498449 STAG1Q8WVM7 1258 aa16.31■□□□□ 0.2
SYNPR-215ENST00000498449 NEK1Q96PY6 1258 aa16.31■□□□□ 0.2
SYNPR-215ENST00000498449 VEZTQ9HBM0 779 aa16.31■□□□□ 0.2
SYNPR-215ENST00000498449 ZSWIM6Q9HCJ5 1215 aa16.31■□□□□ 0.2
SYNPR-215ENST00000498449 TACC3Q9Y6A5 838 aa16.31■□□□□ 0.2
SYNPR-215ENST00000498449 CNTNAP1P78357 1384 aa16.3■□□□□ 0.2
SYNPR-215ENST00000498449 ATRNL1Q5VV63 1379 aa16.3■□□□□ 0.2
SYNPR-215ENST00000498449 TCP10L2B9ZVM9 353 aa16.3■□□□□ 0.2
SYNPR-215ENST00000498449 CPA1P15085 419 aa16.3■□□□□ 0.2
SYNPR-215ENST00000498449 ANP32AP39687 249 aaKnown RBP16.3■□□□□ 0.2
SYNPR-215ENST00000498449 PLCD1P51178 756 aa16.3■□□□□ 0.2
SYNPR-215ENST00000498449 TCP10Q12799 353 aa16.3■□□□□ 0.2
SYNPR-215ENST00000498449 COL9A3Q14050 684 aaPredicted RBP16.3■□□□□ 0.2
SYNPR-215ENST00000498449 BLOC1S2Q6QNY1 142 aa16.3■□□□□ 0.2
SYNPR-215ENST00000498449 RNF41Q9H4P4 317 aaPredicted RBP16.3■□□□□ 0.2
SYNPR-215ENST00000498449 ADARB2Q9NS39 739 aaKnown RBP16.3■□□□□ 0.2
SYNPR-215ENST00000498449 ASTN2O75129 1339 aaPredicted RBP16.29■□□□□ 0.2
SYNPR-215ENST00000498449 SLC3A2P08195 630 aaKnown RBP16.29■□□□□ 0.2
SYNPR-215ENST00000498449 FGRP09769 529 aa16.29■□□□□ 0.2
SYNPR-215ENST00000498449 NEK4P51957 841 aa16.29■□□□□ 0.2
SYNPR-215ENST00000498449 MFSD6Q6ZSS7 791 aa16.29■□□□□ 0.2
SYNPR-215ENST00000498449 SH3BP5LQ7L8J4 393 aa16.29■□□□□ 0.2
SYNPR-215ENST00000498449 RALYLQ86SE5 291 aaKnown RBP16.29■□□□□ 0.2
SYNPR-215ENST00000498449 TTC6Q86TZ1 520 aa16.29■□□□□ 0.2
SYNPR-215ENST00000498449 FAM83AQ86UY5 434 aa16.29■□□□□ 0.2
SYNPR-215ENST00000498449 MB21D2Q8IYB1 491 aaPredicted RBP16.29■□□□□ 0.2
SYNPR-215ENST00000498449 STK11IPQ8N1F8 1099 aa16.29■□□□□ 0.2
SYNPR-215ENST00000498449 NCOA7Q8NI08 942 aa16.29■□□□□ 0.2
SYNPR-215ENST00000498449 FAM151AQ8WW52 585 aa16.29■□□□□ 0.2
SYNPR-215ENST00000498449 INCENPQ9NQS7 918 aa16.29■□□□□ 0.2
SYNPR-215ENST00000498449 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.29■□□□□ 0.2
SYNPR-215ENST00000498449 CYP46A1Q9Y6A2 500 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms