RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 SLC5A1P13866 664 aa14.62□□□□□ -0.07
CDK9-205ENST00000498339 MNX1P50219 401 aaPredicted RBP14.62□□□□□ -0.07
CDK9-205ENST00000498339 PRRT2Q7Z6L0 340 aaPredicted RBP14.62□□□□□ -0.07
CDK9-205ENST00000498339 SCYL3Q8IZE3 742 aa14.62□□□□□ -0.07
CDK9-205ENST00000498339 PXYLP1Q8TE99 480 aa14.62□□□□□ -0.07
CDK9-205ENST00000498339 COA7Q96BR5 231 aa14.62□□□□□ -0.07
CDK9-205ENST00000498339 USP40Q9NVE5 1235 aa14.62□□□□□ -0.07
CDK9-205ENST00000498339 ZMYND8Q9ULU4 1186 aaPredicted RBP14.62□□□□□ -0.07
CDK9-205ENST00000498339 UNC80Q8N2C7 3258 aa14.62□□□□□ -0.07
CDK9-205ENST00000498339 CCDC184Q52MB2 194 aa14.61□□□□□ -0.07
CDK9-205ENST00000498339 WDR63Q8IWG1 891 aa14.61□□□□□ -0.07
CDK9-205ENST00000498339 DEFB123Q8N688 67 aa14.61□□□□□ -0.07
CDK9-205ENST00000498339 ANKRD13CQ8N6S4 541 aa14.61□□□□□ -0.07
CDK9-205ENST00000498339 DIS3LQ8TF46 1054 aaKnown RBP14.61□□□□□ -0.07
CDK9-205ENST00000498339 PAK6Q9NQU5 681 aaPredicted RBP14.61□□□□□ -0.07
CDK9-205ENST00000498339 LRRFIP2Q9Y608 721 aaKnown RBP14.61□□□□□ -0.07
CDK9-205ENST00000498339 KIF16BQ96L93 1317 aa14.61□□□□□ -0.07
CDK9-205ENST00000498339 TRIM75PA6NK02 468 aa14.6□□□□□ -0.07
CDK9-205ENST00000498339 LDHBP07195 334 aaKnown RBP14.6□□□□□ -0.07
CDK9-205ENST00000498339 CAPN2P17655 700 aa14.6□□□□□ -0.07
CDK9-205ENST00000498339 PTPRAP18433 802 aa14.6□□□□□ -0.07
CDK9-205ENST00000498339 PRDX5P30044 214 aa14.6□□□□□ -0.07
CDK9-205ENST00000498339 IRF5Q13568 498 aa14.6□□□□□ -0.07
CDK9-205ENST00000498339 RABL6Q3YEC7 729 aaPredicted RBP14.6□□□□□ -0.07
CDK9-205ENST00000498339 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.6□□□□□ -0.07
CDK9-205ENST00000498339 FAM198AQ9UFP1 575 aa14.6□□□□□ -0.07
CDK9-205ENST00000498339 LOC285556D6RIA3 1793 aa14.6□□□□□ -0.07
CDK9-205ENST00000498339 SYN1P17600 705 aa14.59□□□□□ -0.07
CDK9-205ENST00000498339 Q7L0L9 218 aa14.59□□□□□ -0.07
CDK9-205ENST00000498339 ANKRD44Q8N8A2 993 aa14.59□□□□□ -0.07
CDK9-205ENST00000498339 PNMA3Q9UL41 463 aa14.59□□□□□ -0.07
CDK9-205ENST00000498339 SLC45A1Q9Y2W3 748 aa14.59□□□□□ -0.07
CDK9-205ENST00000498339 FGFR2P21802 821 aa14.58□□□□□ -0.08
CDK9-205ENST00000498339 RGS3P49796 1198 aa14.58□□□□□ -0.08
CDK9-205ENST00000498339 ZFPM1Q8IX07 1006 aa14.58□□□□□ -0.08
CDK9-205ENST00000498339 LPIN2Q92539 896 aa14.58□□□□□ -0.08
CDK9-205ENST00000498339 CRISPLD2Q9H0B8 497 aa14.58□□□□□ -0.08
CDK9-205ENST00000498339 GNL3LQ9NVN8 582 aaKnown RBP14.58□□□□□ -0.08
CDK9-205ENST00000498339 AFG3L2Q9Y4W6 797 aa14.58□□□□□ -0.08
CDK9-205ENST00000498339 UTYO14607 1347 aa14.58□□□□□ -0.08
CDK9-205ENST00000498339 PHF20L1A8MW92 1017 aa14.57□□□□□ -0.08
CDK9-205ENST00000498339 HMGCRP04035 888 aa14.57□□□□□ -0.08
CDK9-205ENST00000498339 PICALMQ13492 652 aa14.57□□□□□ -0.08
CDK9-205ENST00000498339 DZIP1Q86YF9 867 aaKnown RBP14.57□□□□□ -0.08
CDK9-205ENST00000498339 ANKLE1Q8NAG6 615 aa14.57□□□□□ -0.08
CDK9-205ENST00000498339 GDF15Q99988 308 aa14.57□□□□□ -0.08
CDK9-205ENST00000498339 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.57□□□□□ -0.08
CDK9-205ENST00000498339 AGTPBP1Q9UPW5 1226 aa14.57□□□□□ -0.08
CDK9-205ENST00000498339 ATRNL1Q5VV63 1379 aa14.57□□□□□ -0.08
CDK9-205ENST00000498339 BMP8BP34820 402 aa14.56□□□□□ -0.08
CDK9-205ENST00000498339 MAGEA10P43363 369 aaPredicted RBP14.56□□□□□ -0.08
CDK9-205ENST00000498339 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
CDK9-205ENST00000498339 GPR153Q6NV75 609 aa14.56□□□□□ -0.08
CDK9-205ENST00000498339 CCDC84Q86UT8 332 aaPredicted RBP14.56□□□□□ -0.08
CDK9-205ENST00000498339 UBE2OQ9C0C9 1292 aaKnown RBP14.56□□□□□ -0.08
CDK9-205ENST00000498339 NBPF3Q9H094 633 aa14.56□□□□□ -0.08
CDK9-205ENST00000498339 C11orf49Q9H6J7 331 aa14.56□□□□□ -0.08
CDK9-205ENST00000498339 HMX1Q9NP08 348 aaPredicted RBP14.56□□□□□ -0.08
CDK9-205ENST00000498339 STXBP5LQ9Y2K9 1186 aa14.56□□□□□ -0.08
CDK9-205ENST00000498339 PLXNB2O15031 1838 aa14.55□□□□□ -0.08
CDK9-205ENST00000498339 EYA2O00167 538 aa14.55□□□□□ -0.08
CDK9-205ENST00000498339 ENTPD3O75355 529 aa14.55□□□□□ -0.08
CDK9-205ENST00000498339 ATP2B3Q16720 1220 aa14.55□□□□□ -0.08
CDK9-205ENST00000498339 FAM110CQ1W6H9 321 aa14.55□□□□□ -0.08
CDK9-205ENST00000498339 TREML2Q5T2D2 321 aa14.55□□□□□ -0.08
CDK9-205ENST00000498339 TDHQ8IZJ6 230 aa14.55□□□□□ -0.08
CDK9-205ENST00000498339 SIL1Q9H173 461 aa14.55□□□□□ -0.08
CDK9-205ENST00000498339 MRS2Q9HD23 443 aa14.55□□□□□ -0.08
CDK9-205ENST00000498339 CTNND1O60716 968 aaKnown RBP14.54□□□□□ -0.08
CDK9-205ENST00000498339 SLURP2P0DP57 97 aa14.54□□□□□ -0.08
CDK9-205ENST00000498339 ZGPATQ8N5A5 531 aaKnown RBP14.54□□□□□ -0.08
CDK9-205ENST00000498339 DENND2AQ9ULE3 1009 aa14.54□□□□□ -0.08
CDK9-205ENST00000498339 FRMPD3Q5JV73 1810 aa14.54□□□□□ -0.08
CDK9-205ENST00000498339 RPTORQ8N122 1335 aa14.53□□□□□ -0.08
CDK9-205ENST00000498339 DDTLA6NHG4 134 aaPredicted RBP14.53□□□□□ -0.08
CDK9-205ENST00000498339 TRIM32Q13049 653 aa14.53□□□□□ -0.08
CDK9-205ENST00000498339 LRIT3Q3SXY7 679 aa14.53□□□□□ -0.08
CDK9-205ENST00000498339 SLF2Q8IX21 1173 aa14.53□□□□□ -0.08
CDK9-205ENST00000498339 IDI2Q9BXS1 227 aa14.53□□□□□ -0.08
CDK9-205ENST00000498339 ABCF2Q9UG63 623 aa14.53□□□□□ -0.08
CDK9-205ENST00000498339 CUL9Q8IWT3 2517 aa14.52□□□□□ -0.08
CDK9-205ENST00000498339 RFX7Q2KHR2 1363 aa14.52□□□□□ -0.08
CDK9-205ENST00000498339 LAMA2P24043 3122 aaKnown RBP14.52□□□□□ -0.08
CDK9-205ENST00000498339 SALL1Q9NSC2 1324 aa14.52□□□□□ -0.08
CDK9-205ENST00000498339 FAM196BA6NMK8 535 aa14.52□□□□□ -0.09
CDK9-205ENST00000498339 BTDP43251 543 aa14.52□□□□□ -0.09
CDK9-205ENST00000498339 PHKA1P46020 1223 aa14.52□□□□□ -0.09
CDK9-205ENST00000498339 GCLCP48506 637 aaPredicted RBP14.52□□□□□ -0.09
CDK9-205ENST00000498339 PABPC4Q13310 644 aaKnown RBP eCLIP14.52□□□□□ -0.09
CDK9-205ENST00000498339 SH3BP5LQ7L8J4 393 aa14.52□□□□□ -0.09
CDK9-205ENST00000498339 PROCA1Q8NCQ7 364 aaPredicted RBP14.52□□□□□ -0.09
CDK9-205ENST00000498339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.52□□□□□ -0.09
CDK9-205ENST00000498339 MTMR10Q9NXD2 777 aa14.52□□□□□ -0.09
CDK9-205ENST00000498339 CEP126Q9P2H0 1117 aa14.52□□□□□ -0.09
CDK9-205ENST00000498339 EYSQ5T1H1 3165 aa14.51□□□□□ -0.09
CDK9-205ENST00000498339 GAKO14976 1311 aa14.51□□□□□ -0.09
CDK9-205ENST00000498339 PTPRCP08575 1304 aa14.51□□□□□ -0.09
CDK9-205ENST00000498339 SEMA3EO15041 775 aa14.51□□□□□ -0.09
CDK9-205ENST00000498339 HMGCS2P54868 508 aa14.51□□□□□ -0.09
CDK9-205ENST00000498339 SPP2Q13103 211 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms